; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025049 (gene) of Chayote v1 genome

Gene IDSed0025049
OrganismSechium edule (Chayote v1)
Descriptionpentatricopeptide repeat-containing protein At4g18975, chloroplastic
Genome locationLG06:2900775..2912743
RNA-Seq ExpressionSed0025049
SyntenySed0025049
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455250.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucumis melo]4.2e-12179.44Show/hide
Query:  MFVRRFYRAAA---PLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M +RRFYRAAA   PLLR+ TVG+TME GV+ LQVG S+Y TM+Q QM KQLAD + KNKDV+NSKAL   SE++IGDIRKH+IGENV R DKI+FLVNT
Subjt:  MFVRRFYRAAA---PLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        LLDLRDSKEAVYGALDAWVAWEQDFPIASLK  LAALEKEQQWHR+VQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKRISIAKSKRRKK
        CRSMI+IYYRNK  EDLVKLFKDLEAFGRKPP+KSIVQRVAD+ EMLGLLEEKER+LVKY+ LF   ++  KKYKR+S  K KR++K
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKRISIAKSKRRKK

XP_022154414.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]7.1e-12176.85Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M VRRF+RA     PLLR+LT GQ M+ GV+ LQVGNS Y TM+Q QMC+QLAD +MKNKDVNNSKALCQ SE++ GD+RKHQIGENV R DKINFLV T
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        L+DLR SKEAVYGALDAWVAWEQ+FPIASLKQ LA LEKEQQWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD
        CRSMISIYYRNK  ++LVKLFKDLEAFGRKPPEKSIVQRVAD+YEMLGL EEKER+L KY+DLFT ++K   +KY +IS  KSKRR+K  +     GD
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD

XP_022154416.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 [Momordica charantia]7.1e-12176.85Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M VRRF+RA     PLLR+LT GQ M+ GV+ LQVGNS Y TM+Q QMC+QLAD +MKNKDVNNSKALCQ SE++ GD+RKHQIGENV R DKINFLV T
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        L+DLR SKEAVYGALDAWVAWEQ+FPIASLKQ LA LEKEQQWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD
        CRSMISIYYRNK  ++LVKLFKDLEAFGRKPPEKSIVQRVAD+YEMLGL EEKER+L KY+DLFT ++K   +KY +IS  KSKRR+K  +     GD
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD

XP_022967610.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita maxima]1.0e-11981.88Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M +RRF+RA   A PLLR+ TVGQ ME GVN LQ+GNS Y TM+Q QM K+ AD +M +KDVNNSK L QTSER+IGDIRKHQIGENV R DKINFLVNT
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLK ALA LEKE QWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYK
        CRSMISIYYRNK  EDLVKLFKDLEAFGRKPPEKSIVQRVAD+ EMLGL+EEKER+LVKY  LFT +KK   KKYK
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYK

XP_038887984.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Benincasa hispida]3.5e-12079.17Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M VRRF+RA   A PLLR+LTVGQ ME GV+ LQVG+  Y TM+Q QM KQLA  ++KNKD NNSKAL QTSE++IGD+RKHQIG+NVPR DKINFLVNT
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        LLDLRDSKEAVYGALDAWVAWEQDFPI SLK  L  LEKEQQWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKK
        CRSMI+IYYRNK  EDLVKLFKDLEAFGRKPPEKSIVQRVAD+ E+LGLLEEKER+L+KY+ LFT +K+   KKYKR+S  KSK ++K
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKK

TrEMBL top hitse value%identityAlignment
A0A1S3C174 pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.0e-12179.44Show/hide
Query:  MFVRRFYRAAA---PLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M +RRFYRAAA   PLLR+ TVG+TME GV+ LQVG S+Y TM+Q QM KQLAD + KNKDV+NSKAL   SE++IGDIRKH+IGENV R DKI+FLVNT
Subjt:  MFVRRFYRAAA---PLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        LLDLRDSKEAVYGALDAWVAWEQDFPIASLK  LAALEKEQQWHR+VQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKRISIAKSKRRKK
        CRSMI+IYYRNK  EDLVKLFKDLEAFGRKPP+KSIVQRVAD+ EMLGLLEEKER+LVKY+ LF   ++  KKYKR+S  K KR++K
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKRISIAKSKRRKK

A0A6J1DM10 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X13.4e-12176.85Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M VRRF+RA     PLLR+LT GQ M+ GV+ LQVGNS Y TM+Q QMC+QLAD +MKNKDVNNSKALCQ SE++ GD+RKHQIGENV R DKINFLV T
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        L+DLR SKEAVYGALDAWVAWEQ+FPIASLKQ LA LEKEQQWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD
        CRSMISIYYRNK  ++LVKLFKDLEAFGRKPPEKSIVQRVAD+YEMLGL EEKER+L KY+DLFT ++K   +KY +IS  KSKRR+K  +     GD
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD

A0A6J1DNN5 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X33.4e-12176.85Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M VRRF+RA     PLLR+LT GQ M+ GV+ LQVGNS Y TM+Q QMC+QLAD +MKNKDVNNSKALCQ SE++ GD+RKHQIGENV R DKINFLV T
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        L+DLR SKEAVYGALDAWVAWEQ+FPIASLKQ LA LEKEQQWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEE+HKFWVMKIG+DLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD
        CRSMISIYYRNK  ++LVKLFKDLEAFGRKPPEKSIVQRVAD+YEMLGL EEKER+L KY+DLFT ++K   +KY +IS  KSKRR+K  +     GD
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYKRISIAKSKRRKKQMQRVPKTGD

A0A6J1HGC4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X11.6e-11880.8Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M +RRF+RA   A PLLR+ TVGQ ME GVN LQ+GNS Y TM+Q QM K+  D +M +KDVNNSK L QTSER+IGDIRKHQIGENV R DKI+FLVNT
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLK ALA LEKE QWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYK
        CRSMISIYYRNK  EDLVKLFK+LEAFGRKPPEKSIVQRVAD+ EMLGL+EEKER+LVKY  LFT +KK   KKYK
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYK

A0A6J1HUZ4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X15.0e-12081.88Show/hide
Query:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT
        M +RRF+RA   A PLLR+ TVGQ ME GVN LQ+GNS Y TM+Q QM K+ AD +M +KDVNNSK L QTSER+IGDIRKHQIGENV R DKINFLVNT
Subjt:  MFVRRFYRA---AAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLK ALA LEKE QWHRVVQVIKWMLSKGQG T+ VYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQM

Query:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYK
        CRSMISIYYRNK  EDLVKLFKDLEAFGRKPPEKSIVQRVAD+ EMLGL+EEKER+LVKY  LFT +KK   KKYK
Subjt:  CRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKK-EAKKYK

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.9e-3243.9Show/hide
Query:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +  +AL  L K  QWHRV+Q+ KWMLSKGQG T+G Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY
        P ++   MI++Y  +   + ++++F D+E     P E S  +RVA ++  L   E ++ IL +Y
Subjt:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY

Q8LG95 Pentatricopeptide repeat-containing protein At4g211907.8e-3039.63Show/hide
Query:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        ++  +  L + KE VYGALD+++AWE +FP+  +K+AL  LE E++W +++QV KWMLSKGQG T+G Y  L+ AL  D+R +EA + W       L   
Subjt:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY
        P +    MISIYY+    + L ++F D+E  G K P  +IV  V   +  L + ++ E+++ KY
Subjt:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY

Arabidopsis top hitse value%identityAlignment
AT1G04590.1 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1)4.7e-7864.65Show/hide
Query:  RKHQIGENVPRADKINFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAE
        RKHQIGEN+P+ DKI FLVNTLLD+ D+KEAVYGALDAWVAWE++FPIASLK  +A+LEKE QWHR+VQVIKW+LSKGQGNT+G YGQLIRALDMD RAE
Subjt:  RKHQIGENVPRADKINFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAE

Query:  EAHKFWVMKIGSDLHSVPWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKRISI
        EAH  W  K+G+DLHSVPWQ+C  M+ IY+RN   ++LVKLFKDLE++ RKPP+K IVQ VAD+YE+LG+L+EKER++ KY  L      + K  +    
Subjt:  EAHKFWVMKIGSDLHSVPWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKRISI

Query:  AKSKRRKKQMQRVPK
          S+++KK   R+P+
Subjt:  AKSKRRKKQMQRVPK

AT1G04590.2 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4)2.0e-7663.76Show/hide
Query:  RKHQIGENVPRADKINFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAE
        RKHQIGEN+P+ DKI FLVNTLLD+ D+KEAVYGALDAWVAWE++FPIASLK  +A+LEKE QWHR+VQVIKW+LSKGQGNT+G YGQLIRALDMD RAE
Subjt:  RKHQIGENVPRADKINFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAE

Query:  EAHKFWVMKIGSDLHSVPWQMCRSMISIYYRNKRPEDLV---KLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKR
        EAH  W  K+G+DLHSVPWQ+C  M+ IY+RN   ++LV   KLFKDLE++ RKPP+K IVQ VAD+YE+LG+L+EKER++ KY  L      + K  + 
Subjt:  EAHKFWVMKIGSDLHSVPWQMCRSMISIYYRNKRPEDLV---KLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKR

Query:  ISIAKSKRRKKQMQRVPK
             S+++KK   R+P+
Subjt:  ISIAKSKRRKKQMQRVPK

AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-3343.9Show/hide
Query:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +  +AL  L K  QWHRV+Q+ KWMLSKGQG T+G Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY
        P ++   MI++Y  +   + ++++F D+E     P E S  +RVA ++  L   E ++ IL +Y
Subjt:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein2.0e-3343.9Show/hide
Query:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +  +AL  L K  QWHRV+Q+ KWMLSKGQG T+G Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY
        P ++   MI++Y  +   + ++++F D+E     P E S  +RVA ++  L   E ++ IL +Y
Subjt:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein2.0e-3343.9Show/hide
Query:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV
        LV  L  L + KEAVYGAL+ WVAWE +FPI +  +AL  L K  QWHRV+Q+ KWMLSKGQG T+G Y  L+ A DMD RA+EA   W M + +   S+
Subjt:  LVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSV

Query:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY
        P ++   MI++Y  +   + ++++F D+E     P E S  +RVA ++  L   E ++ IL +Y
Subjt:  PWQMCRSMISIYYRNKRPEDLVKLFKDLEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGTTCGGAGGTTTTATCGGGCAGCAGCGCCTCTGTTGCGAAACCTAACTGTAGGACAAACAATGGAACATGGCGTCAACAGCTTGCAAGTTGGGAATTCTTTTTA
CAGTACAATGATGCAACCTCAAATGTGTAAACAACTTGCTGATTACAATATGAAAAATAAGGACGTTAACAATAGTAAAGCCTTGTGCCAGACTTCAGAGCGAAGTATTG
GAGACATTAGAAAGCACCAAATTGGGGAGAATGTTCCAAGGGCGGACAAAATTAACTTCCTTGTAAATACGCTTCTCGATCTTAGAGATAGTAAAGAAGCTGTTTATGGT
GCTCTTGATGCATGGGTTGCATGGGAACAAGATTTTCCAATAGCATCCCTTAAGCAGGCATTGGCTGCCCTTGAGAAGGAGCAGCAATGGCATAGAGTTGTTCAGGTAAT
CAAATGGATGCTGAGCAAGGGGCAGGGAAACACATTGGGAGTCTATGGGCAGTTAATCCGCGCTTTAGACATGGACCATCGAGCCGAAGAAGCACACAAGTTTTGGGTCA
TGAAAATTGGTTCGGATCTTCATTCAGTTCCTTGGCAAATGTGCAGGAGCATGATATCAATATACTACCGAAATAAAAGGCCAGAAGATCTTGTAAAGCTTTTCAAGGAT
CTCGAAGCTTTCGGGCGTAAACCTCCAGAAAAATCAATAGTGCAGAGGGTTGCAGATTCTTATGAAATGCTGGGCTTGCTTGAAGAGAAAGAGAGGATATTAGTGAAGTA
CGAAGATCTTTTTACAGTGGACAAGAAAGAGGCCAAGAAATATAAGAGGATTTCGATTGCAAAATCAAAGAGAAGAAAGAAGCAAATGCAAAGGGTACCGAAGACGGGCG
ATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTGAAGGCAGCGGTTTGGTGTAGGGAAGCATGTTCGTTCGGAGGTTTTATCGGGCAGCAGCGCCTCTGTTGCGAAACCTAACTGTAGGACAAACAATGGAACATGGCG
TCAACAGCTTGCAAGTTGGGAATTCTTTTTACAGTACAATGATGCAACCTCAAATGTGTAAACAACTTGCTGATTACAATATGAAAAATAAGGACGTTAACAATAGTAAA
GCCTTGTGCCAGACTTCAGAGCGAAGTATTGGAGACATTAGAAAGCACCAAATTGGGGAGAATGTTCCAAGGGCGGACAAAATTAACTTCCTTGTAAATACGCTTCTCGA
TCTTAGAGATAGTAAAGAAGCTGTTTATGGTGCTCTTGATGCATGGGTTGCATGGGAACAAGATTTTCCAATAGCATCCCTTAAGCAGGCATTGGCTGCCCTTGAGAAGG
AGCAGCAATGGCATAGAGTTGTTCAGGTAATCAAATGGATGCTGAGCAAGGGGCAGGGAAACACATTGGGAGTCTATGGGCAGTTAATCCGCGCTTTAGACATGGACCAT
CGAGCCGAAGAAGCACACAAGTTTTGGGTCATGAAAATTGGTTCGGATCTTCATTCAGTTCCTTGGCAAATGTGCAGGAGCATGATATCAATATACTACCGAAATAAAAG
GCCAGAAGATCTTGTAAAGCTTTTCAAGGATCTCGAAGCTTTCGGGCGTAAACCTCCAGAAAAATCAATAGTGCAGAGGGTTGCAGATTCTTATGAAATGCTGGGCTTGC
TTGAAGAGAAAGAGAGGATATTAGTGAAGTACGAAGATCTTTTTACAGTGGACAAGAAAGAGGCCAAGAAATATAAGAGGATTTCGATTGCAAAATCAAAGAGAAGAAAG
AAGCAAATGCAAAGGGTACCGAAGACGGGCGATCCTTGATCGTTGGAGTTGGGAGATTCGAACCCACTTTGTCTAGATTGAGTATTCGTGTCAATTATCTTTGGGTTTAG
TCCACTTTTAACAAATTTAATGTAACGTTATCAAATATAAAAGAGGAATTATGTATTGGCAATTGTGTATTGCTTAAGTTATATTTCATTTATTTCAGAAACTTGGGTTA
TGGTTAAGTCTCCTTTAATGTTTTGGGTGTGAATATTTTGCTTTGGCTTTCTAAATAGTTGTTTTAGTTGGTAGAATTATAAATTTATTTCTAGTGTCATGTATTTTGTT
CAATTTATAATGGTC
Protein sequenceShow/hide protein sequence
MFVRRFYRAAAPLLRNLTVGQTMEHGVNSLQVGNSFYSTMMQPQMCKQLADYNMKNKDVNNSKALCQTSERSIGDIRKHQIGENVPRADKINFLVNTLLDLRDSKEAVYG
ALDAWVAWEQDFPIASLKQALAALEKEQQWHRVVQVIKWMLSKGQGNTLGVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQMCRSMISIYYRNKRPEDLVKLFKD
LEAFGRKPPEKSIVQRVADSYEMLGLLEEKERILVKYEDLFTVDKKEAKKYKRISIAKSKRRKKQMQRVPKTGDP