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Sed0025059 (gene) of Chayote v1 genome

Gene IDSed0025059
OrganismSechium edule (Chayote v1)
Descriptionphotosystem I subunit O
Genome locationLG11:27782650..27783919
RNA-Seq ExpressionSed0025059
SyntenySed0025059
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR017498 - Photosystem I PsaO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139499.1 photosystem I subunit O [Cucumis sativus]1.2e-6587.84Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MATAFA SS  V GLG++SL   SS+SPRLVSGF++ PV ARNPL VAGASGG+FTCFER+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]8.7e-6486.49Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MATAFA SS  V GLG++SL   SS+SPRLVSGF++SPV ARNPL V  AS GRFTCFER+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022142590.1 photosystem I subunit O [Momordica charantia]8.7e-6487.25Show/hide
Query:  MATAFAASSATVVGLG-SSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESI
        MATAFA SS T+VGLG SSSL   SS+SPRL S FV+SP  ARNPL VA ASGGRFTCFER+WLRRDLNVIGFGLIGW+APSSIPVI GKSLTGLFFESI
Subjt:  MATAFAASSATVVGLG-SSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESI

Query:  GAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        GAELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  GAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]2.5e-6385.81Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MA+AFA SS +VVGLGSSSL   SS+SPRLVSGF++ PV ARNP  VA + GGRFTCF+R+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_038895620.1 photosystem I subunit O [Benincasa hispida]9.3e-6689.19Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MATAFA SS +VVGLG++SL   SS+SPRLVSGFV+ PVTARNP  VA ASGGRFTCFER+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

TrEMBL top hitse value%identityAlignment
A0A0A0LT61 Uncharacterized protein5.9e-6687.84Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MATAFA SS  V GLG++SL   SS+SPRLVSGF++ PV ARNPL VAGASGG+FTCFER+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A1S3CJR4 photosystem I subunit O4.2e-6486.49Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MATAFA SS  V GLG++SL   SS+SPRLVSGF++SPV ARNPL V  AS GRFTCFER+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1CLD0 photosystem I subunit O4.2e-6487.25Show/hide
Query:  MATAFAASSATVVGLG-SSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESI
        MATAFA SS T+VGLG SSSL   SS+SPRL S FV+SP  ARNPL VA ASGGRFTCFER+WLRRDLNVIGFGLIGW+APSSIPVI GKSLTGLFFESI
Subjt:  MATAFAASSATVVGLG-SSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESI

Query:  GAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        GAELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  GAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1EID2 photosystem I subunit O4.4e-6183.78Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MA+AFA SS +VVGLGSSSL   SS+SPRLVS FV+ PV ARNP  V  + GGR TCF+R+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1IDS7 photosystem I subunit O1.2e-6385.81Show/hide
Query:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG
        MA+AFA SS +VVGLGSSSL   SS+SPRLVSGF++ PV ARNP  VA + GGRFTCF+R+WLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG
Subjt:  MATAFAASSATVVGLGSSSL---SSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

SwissProt top hitse value%identityAlignment
Q949Q5 Photosystem I subunit O7.5e-5874.83Show/hide
Query:  MATAFAASSATVVGLGSSSLSSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIGAEL
        MA  FA  S TV+GLG SS+++K     S F++  ++A+NPL++AGASGGR TCFERNWLRRDLNV+GFGLIGW+APSSIP I GKSLTGLFF+SIG EL
Subjt:  MATAFAASSATVVGLGSSSLSSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIGAEL

Query:  AHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        AHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  AHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF

Arabidopsis top hitse value%identityAlignment
AT1G08380.1 photosystem I subunit O5.3e-5974.83Show/hide
Query:  MATAFAASSATVVGLGSSSLSSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIGAEL
        MA  FA  S TV+GLG SS+++K     S F++  ++A+NPL++AGASGGR TCFERNWLRRDLNV+GFGLIGW+APSSIP I GKSLTGLFF+SIG EL
Subjt:  MATAFAASSATVVGLGSSSLSSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIGAEL

Query:  AHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        AHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  AHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCTTCGCCGCCTCCTCTGCCACCGTCGTTGGCCTCGGTAGCTCCTCCCTCTCCTCCAAATCCCCCCGCCTCGTCTCGGGGTTCGTGAGATCACCCGTGAC
CGCAAGGAATCCTTTGCAAGTAGCGGGTGCATCGGGCGGAAGGTTCACGTGCTTTGAGAGAAACTGGCTTCGGAGAGATCTGAATGTGATCGGATTCGGACTGATCGGGT
GGATTGCGCCGTCGAGCATTCCGGTGATCGGAGGGAAGAGCTTGACCGGCCTCTTCTTTGAGAGCATTGGCGCAGAGCTTGCCCATTTCCCTTCTCCTCCAGCACTCACT
TCTCAGTTCTGGTTGTGGCTGATTACGTGGCACTTGGGTCTGTTCATTACGCTTACATTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGATTACTTTTCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATCAAATCCACAATTCTTCCCCAATTCTCATCCACTAAACTCCCCAACAAAATCCCACTCTCACTTCTCTACAAACCAATCACACATCCGAGCCCTAATTTCTCACGAAA
ATCCTCGAAAATGGCCACCGCCTTCGCCGCCTCCTCTGCCACCGTCGTTGGCCTCGGTAGCTCCTCCCTCTCCTCCAAATCCCCCCGCCTCGTCTCGGGGTTCGTGAGAT
CACCCGTGACCGCAAGGAATCCTTTGCAAGTAGCGGGTGCATCGGGCGGAAGGTTCACGTGCTTTGAGAGAAACTGGCTTCGGAGAGATCTGAATGTGATCGGATTCGGA
CTGATCGGGTGGATTGCGCCGTCGAGCATTCCGGTGATCGGAGGGAAGAGCTTGACCGGCCTCTTCTTTGAGAGCATTGGCGCAGAGCTTGCCCATTTCCCTTCTCCTCC
AGCACTCACTTCTCAGTTCTGGTTGTGGCTGATTACGTGGCACTTGGGTCTGTTCATTACGCTTACATTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGATTACTTTT
CAAAGTGAAAAATGTAATAATAAGTCCTTAAAATGGAAATGGAATTCCACTTCTTGTTCTTCATGTTTATAAACTCACTAGTAATGTTTTGTGGACATGTCTTTTTTTCC
TCTTCATGTAAATCCTTTCAATCTCGCAATCTTGTGTTAGATTATTAAATAATGTTTTTGTTTTTTATATTAAAAAATATATGAAGAATGAGTATTCGAA
Protein sequenceShow/hide protein sequence
MATAFAASSATVVGLGSSSLSSKSPRLVSGFVRSPVTARNPLQVAGASGGRFTCFERNWLRRDLNVIGFGLIGWIAPSSIPVIGGKSLTGLFFESIGAELAHFPSPPALT
SQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK