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Sed0025073 (gene) of Chayote v1 genome

Gene IDSed0025073
OrganismSechium edule (Chayote v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationLG04:47029689..47030180
RNA-Seq ExpressionSed0025073
SyntenySed0025073
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588987.1 Indole-3-acetic acid-induced protein ARG7, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4689Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS
        MG+HLTGIANA+QKLQRTF+A+ GIGSA TNVPKGHFAVYVGE QKKRFVIPI+YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPC+EDYF+TLTSALNCS
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS

XP_022135840.1 auxin-induced protein 15A-like [Momordica charantia]4.8e-4589Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS
        MGIHLTGIANA+QKLQRT SA+ G+GSA TNVPKGHFAVYVGE  KKRFVIPI+YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPCSEDYFI+LTSALNCS
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS

XP_023529826.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]4.3e-4689Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS
        MG+HLTGIANA+QKLQRTF+A+ GIGS  TNVPKGHFAVYVGE QKKRFVIPI+YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPC+EDYFITLTSALNCS
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS

XP_023553727.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]1.4e-4488Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS
        MGIHLTGIANA+QKLQRT S + GIGSA TNVPKGHFAVYVGE +KKRFVIPI+YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPCSEDYFI+LTS+LNCS
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS

XP_038887902.1 auxin-induced protein 15A-like [Benincasa hispida]8.2e-4590.2Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSA--ATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        MGIHLTGIANA+QKLQRTFSA+ GIGSA   TNVPKGHFAVYVGE QKKRFVIPI YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPCSEDYFI+LTSALN
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSA--ATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

Query:  CS
        CS
Subjt:  CS

TrEMBL top hitse value%identityAlignment
A0A0A0K174 Uncharacterized protein3.4e-4487.25Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAAT--NVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        MGIHLTGIANA+QKLQRTFS + GIGSA T  NVPKGHFAVYVGE QKKRFV+PI YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPC+EDYFI+LTSALN
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAAT--NVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

Query:  CS
        CS
Subjt:  CS

A0A5D3CL70 Auxin-induced protein 15A1.3e-4387.25Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAAT--NVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        MGIHLTGIANA+QKLQRTFS + GIGSA T  NVPKGHFAVYVGE QKKRFVIPI YLNHPLFKDLLNLAE+EFGFDHP GGLTIPC+EDYFI+LTSALN
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAAT--NVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

Query:  CS
        CS
Subjt:  CS

A0A6J1C266 auxin-induced protein 15A-like2.3e-4589Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS
        MGIHLTGIANA+QKLQRT SA+ G+GSA TNVPKGHFAVYVGE  KKRFVIPI+YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPCSEDYFI+LTSALNCS
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS

A0A6J1GKP6 auxin-induced protein 15A-like6.8e-4588Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS
        MGIHLTGIANA+QKLQRT S + GIGSA TNVPKGHFAVYVGE +KKRFVIPI+YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPCSEDYFI+LTS+LNCS
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS

A0A6J1I2U1 auxin-induced protein 15A-like6.8e-4588Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS
        MGIHLTGIANA+QKLQRT S + GIGSA TNVPKGHFAVYVGE +KKRFVIPI+YLNHPLFKDLLNLAE+EFGFDHPMGGLTIPCSEDYFI+LTS+LNCS
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG77.5e-2558.16Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        MG  L GI       ++T SARN   S   + PKG+ AVYVGE   KRFVIP+++LN PLF+DLL+ AE+EFG+DHPMGGLTIPCSED F  +TS L+
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

P33080 Auxin-induced protein X10A2.2e-2456.12Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        MG  L GI       ++T  A N   S +  VPKG+  VYVG+K  +RF+IP++YLN P F+DLLN AE+EFG+DHPMGGLTIPC ED F+T+TS LN
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

P33081 Auxin-induced protein 15A7.0e-2357.14Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        MG  L GI  A               S A + PKG+ AVYVGEK  KRFVIP++YLN P F+DLL+ AE+EFG+DHPMGGLTIPCSED F  +TS LN
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

P33083 Auxin-induced protein 6B5.9e-2258.16Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        MG  L GI  A      +FSA N   S A +V KG+ AVYVGEK  +RFVIP++YLN P F+DLL+ AE+EFG+ HP GGLTIPCSED F  +TS LN
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

Q9FK62 Auxin-responsive protein SAUR241.2e-2260.98Show/hide
Query:  QRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSAL
        ++  S   G GSAA   PKG  AVYVGE QKKR+++P++YLN P F+ LL+ +E+EFGFDHPMGGLTIPC ED FI +TS L
Subjt:  QRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSAL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.8e-2452.48Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGE-KQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNC
        M I ++ +  + ++L ++ S      S    +PKGH AVYVGE  QK+RFV+P+TYL+HP F+ LL  AE+EFGFDHPMGGLTIPC+E  FI L S L+ 
Subjt:  MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGE-KQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNC

Query:  S
        S
Subjt:  S

AT4G34770.1 SAUR-like auxin-responsive protein family2.0e-3367.31Show/hide
Query:  MGIHLTGIANARQKLQRTFSARNG---IGSAATNVPKGHFAVYVGEK-QKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSA
        MGI L G++ A+QKLQR+ SAR       S   NVPKGH AVYVGE   +KRFVIPI+YLNHPLF+ LLNLAE+EFGFDHPMGGLTIPC+EDYF  L S 
Subjt:  MGIHLTGIANARQKLQRTFSARNG---IGSAATNVPKGHFAVYVGEK-QKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSA

Query:  LNCS
        L+ S
Subjt:  LNCS

AT4G34810.1 SAUR-like auxin-responsive protein family6.5e-2450.98Show/hide
Query:  MGIHLTGIANARQKLQRTFSARN---GIGSAATNVPKGHFAVYVGEK---QKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLT
        MG+    I+NA +++ +  S  N      S++ +VPKGH AVYVGE+   +KKRFV+PI++LNHP FK+ L+ AE+EFGF+HPMGGLTIPC E+ F+ L 
Subjt:  MGIHLTGIANARQKLQRTFSARN---GIGSAATNVPKGHFAVYVGEK---QKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLT

Query:  SA
        ++
Subjt:  SA

AT4G38840.1 SAUR-like auxin-responsive protein family1.0e-2453.85Show/hide
Query:  IANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN
        + +++Q L++     +   S++ +VPKG+ AVYVGE+  KRFV+P++YL+ P F+DLL  AE+EFGFDHPMGGLTIPCSE+ FI L S  N
Subjt:  IANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALN

AT5G18080.1 SAUR-like auxin-responsive protein family8.5e-2460.98Show/hide
Query:  QRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSAL
        ++  S   G GSAA   PKG  AVYVGE QKKR+++P++YLN P F+ LL+ +E+EFGFDHPMGGLTIPC ED FI +TS L
Subjt:  QRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCATTTGACAGGAATCGCAAATGCGAGGCAAAAGCTACAGAGAACATTCTCGGCGAGAAACGGGATCGGATCGGCGGCGACGAATGTTCCGAAAGGGCATTT
CGCAGTATATGTAGGGGAAAAACAGAAGAAGAGATTTGTGATTCCGATAACGTACCTGAATCATCCATTGTTCAAGGATTTGTTGAACCTTGCGGAACAGGAATTTGGAT
TCGATCATCCAATGGGCGGCCTCACCATTCCTTGCAGCGAAGATTACTTCATCACCTTAACTTCTGCCCTAAATTGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
GCAAAGCACACTATCAATCAAATCCATTCAAACCTAGGTCAAATTCAAAAACAGAGCCTAATCCTTCTTCCTTGCTCTAAAATCAAACAGAGATGGGAATCCATTTGACA
GGAATCGCAAATGCGAGGCAAAAGCTACAGAGAACATTCTCGGCGAGAAACGGGATCGGATCGGCGGCGACGAATGTTCCGAAAGGGCATTTCGCAGTATATGTAGGGGA
AAAACAGAAGAAGAGATTTGTGATTCCGATAACGTACCTGAATCATCCATTGTTCAAGGATTTGTTGAACCTTGCGGAACAGGAATTTGGATTCGATCATCCAATGGGCG
GCCTCACCATTCCTTGCAGCGAAGATTACTTCATCACCTTAACTTCTGCCCTAAATTGTTCTTGAATTTTCAATCATCTTCTTTAGCCTGACTTCTTTTTTTTTCCTGTT
AAGAATCAAAATCTAGAGATTCCATTGTCGAAGCTGGTCTCTGTGAATTTTG
Protein sequenceShow/hide protein sequence
MGIHLTGIANARQKLQRTFSARNGIGSAATNVPKGHFAVYVGEKQKKRFVIPITYLNHPLFKDLLNLAEQEFGFDHPMGGLTIPCSEDYFITLTSALNCS