CuGenDBv2

Gene ID	Sed0025074
Organism	Sechium edule (Chayote v1)
Description	CUE domain-containing protein
Genome location	LG05:30558834..30561418
RNA-Seq Expression	Sed0025074
Synteny	Sed0025074
Gene Ontology terms	NA
InterPro domains	IPR038981 - Polyadenylate-binding protein-interacting protein 5/6

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591590.1 Polyadenylate-binding protein-interacting protein 5, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-20

41.35

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Query:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS
        E Q E AIIS  G MKP  SSLNP ATSYIP   RE +K  I E+SS ++IG                  G+ AP  AVAS V N P  GS+S+ ++E +
Subjt:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS

Query:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAAVGLESGSLVVGRPSSLESGS
        E+E F  +  M+L  L   F  LS++ LT+VY  N  DL+A + ML +L+ K        PE LPDSL IGD SES     G  +   +  R  ++ SG+
Subjt:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAAVGLESGSLVVGRPSSLESGS

Query:  AAVGRPSS
             PSS
Subjt:  AAVGRPSS

KAG7024479.1 Polyadenylate-binding protein-interacting protein 5 [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-20

44.75

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Query:  KEPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNES
        +E Q E AIIS  G MKP  SSLNP ATSYIP   RE +K  I E+SS ++IG                  G+ AP  AVAS V N P  GS+S+ ++E 
Subjt:  KEPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNES

Query:  SELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA
        +E+E F  +  M+L  L   F  LS++ LT+VY  N  DL+A + ML +L+ K        PE LPDSL IGD SES  AA
Subjt:  SELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA

XP_022935877.1 polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata]

2.5e-20

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Query:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS
        E Q E AIIS  G MKP  SSLNP ATSYIP   RE +K  I E+SS ++IG                  G+ AP  AVAS V N P  GS+S+ ++E +
Subjt:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS

Query:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA
        E+E F  +  M+L  L   F  LS++ LT+VY  N  DL+A + ML +L+ K        PE LPDSL IGD SES  AA
Subjt:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA

XP_022976200.1 polyadenylate-binding protein-interacting protein 5-like [Cucurbita maxima]

8.0e-19

43.33

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Query:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS
        E Q E AIIS  G MKP  SSLNP ATSYIP   RE +K  + E+SS ++IG                  G+ AP  AVA  V N P  GS+S+ ++E +
Subjt:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS

Query:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA
        E+E F  +  M+L  L   F  LS++ L  VY  N  DL+A + ML +L+ K        PE LPDSL IGD SES  AA
Subjt:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA

XP_023536366.1 polyadenylate-binding protein-interacting protein 5-like [Cucurbita pepo subsp. pepo]

2.5e-20

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Query:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS
        E Q E AIIS  G MKP  SSLNP ATSYIP   RE +K  I E+SS ++IG                  G+ AP  AVAS V N P  GS+S+ ++E +
Subjt:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS

Query:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA
        E+E F  +  M+L  L   F  LS++ LT+VY  N  DL+A + ML +L+ K        PE LPDSL IGD SES  AA
Subjt:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CR41 polyadenylate-binding protein-interacting protein 5

4.7e-17

41.18

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Query:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG--------------------------RGQNAPVAVASPVNNPPARGSVSQHSNESSELEKFD
        MKP  SSLNP ATSYIP   R  ++T I EN+S ++IG                           G+ A VA +S V N P  GS+SQ S++ SE+E FD
Subjt:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG--------------------------RGQNAPVAVASPVNNPPARGSVSQHSNESSELEKFD

Query:  GQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSES
         +  MDL  L  +F  LS++ LT+VY  N+ DL+A + ML +L+ K         E LPD+L IGD SES
Subjt:  GQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSES

A0A5A7TBQ8 Polyadenylate-binding protein-interacting protein 5

1.9e-18

41.24

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Query:  IISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG--------------------------RGQNAPVAVASPVNNPPARGSVSQHSNES
        I+S  G MKP  SSLNP ATSYIP   R  ++T I EN+S ++IG                           G+ A VA +S V N P  GS+SQ S++ 
Subjt:  IISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG--------------------------RGQNAPVAVASPVNNPPARGSVSQHSNES

Query:  SELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSES
        SE+E FD +  MDL  L  +F  LS++ LT+VY  N+ DL+A + ML +L+ K         E LPD+L IGD SES
Subjt:  SELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSES

A0A6J1CJ15 polyadenylate-binding protein-interacting protein 5-like

2.5e-18

41.45

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Query:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG--------------------------RGQNAPVAVASPVNNPPARGSVSQHSNESSEL-EKF
        MKP  SSLNP A SYIP   RE  K  I ENSS  SIG                           G+ AP+AV S + N P+ GS+SQH +E +E+ E F
Subjt:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG--------------------------RGQNAPVAVASPVNNPPARGSVSQHSNESSEL-EKF

Query:  DGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK---------PERLPDSLGIGDTSESKSAAVGLESGSL--VVGRPSS
        D  F +DL +L  +F  LS + LT+VYL N+ D++A + ML  L+ K         PE LPDSL IGD SE   AA    S  +  VVG  S+
Subjt:  DGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK---------PERLPDSLGIGDTSESKSAAVGLESGSL--VVGRPSS

A0A6J1F6U2 polyadenylate-binding protein-interacting protein 5-like

1.2e-20

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Query:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS
        E Q E AIIS  G MKP  SSLNP ATSYIP   RE +K  I E+SS ++IG                  G+ AP  AVAS V N P  GS+S+ ++E +
Subjt:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS

Query:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA
        E+E F  +  M+L  L   F  LS++ LT+VY  N  DL+A + ML +L+ K        PE LPDSL IGD SES  AA
Subjt:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA

A0A6J1IIU2 polyadenylate-binding protein-interacting protein 5-like

3.9e-19

43.33

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Query:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS
        E Q E AIIS  G MKP  SSLNP ATSYIP   RE +K  + E+SS ++IG                  G+ AP  AVA  V N P  GS+S+ ++E +
Subjt:  EPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIG-----------------RGQNAP-VAVASPVNNPPARGSVSQHSNESS

Query:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA
        E+E F  +  M+L  L   F  LS++ L  VY  N  DL+A + ML +L+ K        PE LPDSL IGD SES  AA
Subjt:  ELEKFDGQFKMDLRYLLDNFITLSKEYLTNVYLENERDLEATLAMLRRLKIK--------PERLPDSLGIGDTSESKSAA

SwissProt top hits

e value

%identity

Alignment

Q6NQH9 Polyadenylate-binding protein-interacting protein 6

7.3e-07

32.88

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Query:  MKPKASSLNPRATSYIPSPNRE----DSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNE---SSELEKFDGQFKMDLRYLLDNFITLSK
        MK  +S+LNP A +Y+P   RE    D+K V  ++       +       V    +    + S  +  +E   + +L+  D +  MD+ YLL  +  LS+
Subjt:  MKPKASSLNPRATSYIPSPNRE----DSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNE---SSELEKFDGQFKMDLRYLLDNFITLSK

Query:  EYLTNVYLENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE
        E + +VYL N  DL+AT+ ML +L+I      E LPD+L IGD  E
Subjt:  EYLTNVYLENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE

Q9LYE5 Polyadenylate-binding protein-interacting protein 5

4.9e-11

35.37

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Query:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNESSELEKFDGQFKMDLRYLLDNFITLSKEYLTNVY
        MKP A +LNP A SY+P   R D          DD +     +P    S     P + S   +     +    +    MD+ YLL  F  LS+E +T+VY
Subjt:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNESSELEKFDGQFKMDLRYLLDNFITLSKEYLTNVY

Query:  LENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE-----SKSAAVGLESGSLVVGRPSS
        L N  DLEAT+ ML +L+I      E LP++L IGD SE     SKS  V   + S++   P S
Subjt:  LENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE-----SKSAAVGLESGSLVVGRPSS

Arabidopsis top hits

e value

%identity

Alignment

AT5G11440.1 CTC-interacting domain 5

3.5e-12

35.37

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Query:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNESSELEKFDGQFKMDLRYLLDNFITLSKEYLTNVY
        MKP A +LNP A SY+P   R D          DD +     +P    S     P + S   +     +    +    MD+ YLL  F  LS+E +T+VY
Subjt:  MKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNESSELEKFDGQFKMDLRYLLDNFITLSKEYLTNVY

Query:  LENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE-----SKSAAVGLESGSLVVGRPSS
        L N  DLEAT+ ML +L+I      E LP++L IGD SE     SKS  V   + S++   P S
Subjt:  LENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE-----SKSAAVGLESGSLVVGRPSS

AT5G25540.1 CTC-interacting domain 6

5.2e-08

32.88

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Query:  MKPKASSLNPRATSYIPSPNRE----DSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNE---SSELEKFDGQFKMDLRYLLDNFITLSK
        MK  +S+LNP A +Y+P   RE    D+K V  ++       +       V    +    + S  +  +E   + +L+  D +  MD+ YLL  +  LS+
Subjt:  MKPKASSLNPRATSYIPSPNRE----DSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNE---SSELEKFDGQFKMDLRYLLDNFITLSK

Query:  EYLTNVYLENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE
        E + +VYL N  DL+AT+ ML +L+I      E LPD+L IGD  E
Subjt:  EYLTNVYLENERDLEATLAMLRRLKI----KPERLPDSLGIGDTSE

Sequences

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CDS sequence

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ATGGGGATCTTGTTGGATTCCCTACAATCTCAGTTCCTTATAAATAGACAGCTGCTTTTCCTTCATTTCCTCAGTTCTCTGTTCAGTTCATTCGTGAAAAGCCATTACGA
TTCTCAAGTTCTTGCGTTAGTTTTCAAATTCGAGCATTCAAGATCCACATTCCGTCTCTCTCAGTTCATTCGTGAAGCGATTACGGTTTCTCAAGTTCTTGCGCTAGTGT
TGAAATTCCGCATTCAAGATCCACATTCTGTCTCCCCTAGCAATTACGGTTTCACAAGTTCTTGCATTGGTGTTCAAATTCAGCATTCAAGATCCATATTCTGTCTCTCC
AAGGAACCACAGGGCGAAAAAGCAATCATTTCTGTATTGGGTCCAATGAAGCCTAAGGCATCATCTTTGAATCCACGTGCAACATCCTACATTCCATCCCCCAATAGAGA
GGATAGCAAAACTGTTATAACAGAGAACTCTTCCGATGACAGTATTGGTCGTGGTCAAAATGCACCGGTTGCAGTTGCTTCTCCTGTGAATAATCCCCCTGCTCGGGGAT
CGGTTTCACAACACAGTAACGAATCGAGTGAACTGGAGAAGTTTGATGGACAATTTAAGATGGATCTGAGATATCTTCTTGACAATTTCATTACACTATCTAAGGAATAC
CTTACTAATGTCTATTTGGAAAATGAACGTGACTTGGAGGCTACTTTAGCTATGTTGAGACGGCTCAAGATCAAACCTGAAAGACTTCCGGACAGTTTGGGCATTGGCGA
TACATCAGAATCCAAGTCTGCAGCTGTTGGATTGGAATCCGGGTCATTGGTTGTTGGTCGACCATCTTCATTGGAATCCGGGTCTGCGGCTGTTGGTCGACCATCTTCGA
AAAAGAATGTAGCCAAAGGATCCAAGTAG

mRNA sequence

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Protein sequence

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MGILLDSLQSQFLINRQLLFLHFLSSLFSSFVKSHYDSQVLALVFKFEHSRSTFRLSQFIREAITVSQVLALVLKFRIQDPHSVSPSNYGFTSSCIGVQIQHSRSIFCLS
KEPQGEKAIISVLGPMKPKASSLNPRATSYIPSPNREDSKTVITENSSDDSIGRGQNAPVAVASPVNNPPARGSVSQHSNESSELEKFDGQFKMDLRYLLDNFITLSKEY
LTNVYLENERDLEATLAMLRRLKIKPERLPDSLGIGDTSESKSAAVGLESGSLVVGRPSSLESGSAAVGRPSSKKNVAKGSK

Sed0025074 (gene) of Chayote v1 genome