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Sed0025088 (gene) of Chayote v1 genome

Gene IDSed0025088
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:41008225..41008538
RNA-Seq ExpressionSed0025088
SyntenySed0025088
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599948.1 hypothetical protein SDJN03_05181, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2477.5Show/hide
Query:  MAHPKIIRIKALLLLAL----IALAARVCSSACRPPCYGMAVTRAQEHGE-IEEGPLDDETRNNDPYRMYGDVPSPGVGH
        M HP IIRI+ALLLLAL      LAARVC++ACRPPCYG+AVTRAQEH E +EEG LDDET++NDPYRMYGDVPSPGVGH
Subjt:  MAHPKIIRIKALLLLAL----IALAARVCSSACRPPCYGMAVTRAQEHGE-IEEGPLDDETRNNDPYRMYGDVPSPGVGH
KGN50727.1 hypothetical protein Csa_005780 [Cucumis sativus]1.2e-1664.2Show/hide
Query:  MAHPKI---IRIKALLLLALI---ALAARVCSSACRPPCYGMAVTRAQEHGEIEEGPLDDETRNNDPYRMYGDVPSPGVGH
        M H KI   IRIK LLLLAL+        VCSSACR PC+ +A+ RAQEH EI +G LDD++++NDPYRMYGDVPSPGVGH
Subjt:  MAHPKI---IRIKALLLLALI---ALAARVCSSACRPPCYGMAVTRAQEHGEIEEGPLDDETRNNDPYRMYGDVPSPGVGH
TrEMBL top hitse value%identityAlignment
A0A0A0KQN4 Uncharacterized protein5.8e-1764.2Show/hide
Query:  MAHPKI---IRIKALLLLALI---ALAARVCSSACRPPCYGMAVTRAQEHGEIEEGPLDDETRNNDPYRMYGDVPSPGVGH
        M H KI   IRIK LLLLAL+        VCSSACR PC+ +A+ RAQEH EI +G LDD++++NDPYRMYGDVPSPGVGH
Subjt:  MAHPKI---IRIKALLLLALI---ALAARVCSSACRPPCYGMAVTRAQEHGEIEEGPLDDETRNNDPYRMYGDVPSPGVGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATCCTAAGATCATCAGGATCAAAGCTCTTCTTCTTCTTGCCCTCATCGCTCTTGCTGCTCGAGTTTGTAGCTCTGCCTGTCGTCCACCGTGCTACGGCATGGC
GGTCACCCGAGCTCAAGAACATGGAGAAATAGAAGAGGGACCATTGGATGATGAAACAAGGAACAATGATCCTTACAGAATGTATGGGGATGTTCCAAGCCCTGGTGTTG
GCCACTGA
mRNA sequenceShow/hide mRNA sequence
CCTCATTATATCATCTCCAAAACAAAAAAGCAAAAATCCCACTTTTCTCCTCTTTCCCCTTCTCCTCCATAGCCAAAACCTCCAACATGGCTCATCCTAAGATCATCAGG
ATCAAAGCTCTTCTTCTTCTTGCCCTCATCGCTCTTGCTGCTCGAGTTTGTAGCTCTGCCTGTCGTCCACCGTGCTACGGCATGGCGGTCACCCGAGCTCAAGAACATGG
AGAAATAGAAGAGGGACCATTGGATGATGAAACAAGGAACAATGATCCTTACAGAATGTATGGGGATGTTCCAAGCCCTGGTGTTGGCCACTGA
Protein sequenceShow/hide protein sequence
MAHPKIIRIKALLLLALIALAARVCSSACRPPCYGMAVTRAQEHGEIEEGPLDDETRNNDPYRMYGDVPSPGVGH