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Sed0025096 (gene) of Chayote v1 genome

Gene IDSed0025096
OrganismSechium edule (Chayote v1)
DescriptionCopper amine oxidase family protein
Genome locationLG06:15934203..15934439
RNA-Seq ExpressionSed0025096
SyntenySed0025096
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC31035.1 hypothetical protein L484_021337 [Morus notabilis]6.9e-0745.12Show/hide
Query:  NLIVLITLITFLLHL--FPVTSRPLHGIHPPTTAL-------------VSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPP
        +L+ L   +  LLH   F  +SRPLH +HPP   L                F  N YK  E DAFRPT+PGHSPGVGH  PP
Subjt:  NLIVLITLITFLLHL--FPVTSRPLHGIHPPTTAL-------------VSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPP

KAF8033451.1 hypothetical protein BT93_D2151 [Corymbia citriodora subsp. variegata]3.1e-0752.38Show/hide
Query:  SRPLHGIHPPTT------------ALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP
        SRPL   HPP                +   + NRYK  E +AFRPTSPGHSPGVGH EPPGAP
Subjt:  SRPLHGIHPPTT------------ALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP

KAG6591857.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1455.32Show/hide
Query:  ARRSLHLNLIVLITLITFLLHLFPVTSRPLHGIH-------------------PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPG
        ARRSLH   I L+ LIT LLH   VTSRPLHGI                    PP      AF  NRYKYVE DAFRPT+PGHSPGVGH +PPG
Subjt:  ARRSLHLNLIVLITLITFLLHLFPVTSRPLHGIH-------------------PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPG

KAG6608019.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1353.33Show/hide
Query:  MARRSLHLNLIVLITLITFLLHLFPVTSRPLHGIHPPT-------------TALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGA
        M  RS H     L+ L+ FLL+   VTSRP H I+ P               A +S F  NRYKYVEMDAFRPTSPGHSPGVGH++PPGA
Subjt:  MARRSLHLNLIVLITLITFLLHLFPVTSRPLHGIHPPT-------------TALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGA

OAY24263.1 hypothetical protein MANES_17G001300v8 [Manihot esculenta]2.8e-0848.31Show/hide
Query:  MARRSLHLNLIVLITLITFLLH--LFPVTSRPLHGIHPPTTALVS----------AFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGA
        MA + L L  +  + L+   LH  L    SRPLH IHPPT    S           +  NR+K+ E +AFRPTSPGHSPGVGHE PPGA
Subjt:  MARRSLHLNLIVLITLITFLLH--LFPVTSRPLHGIHPPTTALVS----------AFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGA

TrEMBL top hitse value%identityAlignment
A0A0A0KWX0 Uncharacterized protein1.4e-1658.24Show/hide
Query:  MARRSLHLN----LIVLITLITFLLHLFPVTSRPLHGIH---------PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP
        MA RSLHLN    L+ L+ L+  L  LF  +SRPLHGIH         P   +L ++F  NRYKYVE DAFRPTSPGHSPGVGH EPPG P
Subjt:  MARRSLHLN----LIVLITLITFLLHLFPVTSRPLHGIH---------PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP

A0A2C9U3U8 Uncharacterized protein1.4e-0848.31Show/hide
Query:  MARRSLHLNLIVLITLITFLLH--LFPVTSRPLHGIHPPTTALVS----------AFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGA
        MA + L L  +  + L+   LH  L    SRPLH IHPPT    S           +  NR+K+ E +AFRPTSPGHSPGVGHE PPGA
Subjt:  MARRSLHLNLIVLITLITFLLH--LFPVTSRPLHGIHPPTTALVS----------AFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGA

A0A2C9UJ23 Uncharacterized protein4.4e-0744.44Show/hide
Query:  MARRSLHLNLIV-LITLITFLLHLFPVTSRPLHGIHPP--------TTALVSAFL---TNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP
        MA ++   +L+  ++ L+   + L    SR LH IHPP              +F+    NRYKY E +AFRPTSPGHSPGVGH++PPGAP
Subjt:  MARRSLHLNLIV-LITLITFLLHLFPVTSRPLHGIHPP--------TTALVSAFL---TNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP

A0A2N9H1U7 Uncharacterized protein5.2e-0849.41Show/hide
Query:  HLNLIVLITLITFLLHL---FPVTSRPLHGIHPPTTALVSA----------FLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP
        H   ++   +  FLL L   +   SRP+ GIHPP     S           F  NRYK VE DAFRPTSPGHSPGVGHE+PP AP
Subjt:  HLNLIVLITLITFLLHL---FPVTSRPLHGIHPPTTALVSA----------FLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP

W9S854 Uncharacterized protein3.3e-0745.12Show/hide
Query:  NLIVLITLITFLLHL--FPVTSRPLHGIHPPTTAL-------------VSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPP
        +L+ L   +  LLH   F  +SRPLH +HPP   L                F  N YK  E DAFRPT+PGHSPGVGH  PP
Subjt:  NLIVLITLITFLLHL--FPVTSRPLHGIHPPTTAL-------------VSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPP

SwissProt top hitse value%identityAlignment
Q3EBM6 Precursor of CEP41.4e-0553.49Show/hide
Query:  PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP
        PP    V     NR+K +E DAFRPT  G S G+GH+ PPGAP
Subjt:  PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP

Arabidopsis top hitse value%identityAlignment
AT2G35612.1 FUNCTIONS IN: molecular_function unknown9.6e-0753.49Show/hide
Query:  PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP
        PP    V     NR+K +E DAFRPT  G S G+GH+ PPGAP
Subjt:  PPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTAGAAGTTTACACTTGAATTTGATTGTTCTTATCACTCTCATCACTTTTCTCCTTCACCTCTTCCCTGTAACATCACGGCCACTTCATGGCATTCATCCACC
GACCACGGCTCTAGTGTCAGCGTTCTTGACAAATCGGTATAAATATGTAGAGATGGATGCTTTTCGACCGACCTCACCGGGGCATAGCCCCGGGGTCGGCCACGAGGAAC
CACCCGGTGCACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTAGAAGTTTACACTTGAATTTGATTGTTCTTATCACTCTCATCACTTTTCTCCTTCACCTCTTCCCTGTAACATCACGGCCACTTCATGGCATTCATCCACC
GACCACGGCTCTAGTGTCAGCGTTCTTGACAAATCGGTATAAATATGTAGAGATGGATGCTTTTCGACCGACCTCACCGGGGCATAGCCCCGGGGTCGGCCACGAGGAAC
CACCCGGTGCACCCTAG
Protein sequenceShow/hide protein sequence
MARRSLHLNLIVLITLITFLLHLFPVTSRPLHGIHPPTTALVSAFLTNRYKYVEMDAFRPTSPGHSPGVGHEEPPGAP