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Sed0025097 (gene) of Chayote v1 genome

Gene IDSed0025097
OrganismSechium edule (Chayote v1)
DescriptionVrrB
Genome locationLG05:5347192..5348541
RNA-Seq ExpressionSed0025097
SyntenySed0025097
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_048551230.1 hypothetical protein [Bacillus cereus]5.7e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
WP_071709331.1 hypothetical protein [Bacillus sp. L27]5.7e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
WP_144473385.1 hypothetical protein [Bacillus tropicus]5.7e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
WP_163247391.1 hypothetical protein [Bacillus tropicus]5.7e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
WP_193110176.1 hypothetical protein [Bacillus anthracis]5.7e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
TrEMBL top hitse value%identityAlignment
A0A0J7IL54 VrrB2.8e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
A0A443G6V9 Uncharacterized protein3.6e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
A0A5F0X334 Uncharacterized protein4.7e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
C2UKI3 Uncharacterized protein4.7e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
J8MGT2 Uncharacterized protein3.6e-0558.33Show/hide
Query:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
        HD H   H  GH    GHHH QG H  HGHHH QG H  HGHHH Q  HGHHGH    VH
Subjt:  HDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCAGCAATGCTGCAAACCAACTCAGCACGACAAACACCAAAAAGACCATTGCTCCGGCCACGACAAGACTAAAGGCCACCATCACGGCCAGGGTTCGCACGT
GGGGCACGGCCACCATCATGGCCAGGGTTCGCACGTGGCGCATGGCCACCATCACGGCCAGGTTTCGCACGGGCATCACGGCCATGGCAGTGGCGACGTGCACTGCAAGC
CGGCCGGATTGAAGAAAAAGAAGGAACATCACAAAAAGAAAGAAGGGCACAAGACTAAGAATTCTTGCTCTGACCACAGTAGTAGCGACAGCAGTGATAGCAGCGACGAT
GAATGTCACAAGAGGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATCCATTTCGAGGTGTAATATTTTGAAACAAAATATATATATATTCCAATAATAATAAAACTCTTCTAAACATTACTCTTAAAAAGAAGTTTGTTTGTTTGATAAAATAT
TAAGAGAGAATAATTTGAATTAATATGGATTCCACTTTGAGTTCCAATTTTTAAACAGTATAAAAAACCCTCCAAACCTGGCCTTTGATTACAAGCAAAGCAGCTCCTTC
CAAAGATATTAAAAAAAACCAAAACAAAACAAAAGCTCCAATATTTGCATCCATGGCGTCTCAGCAATGCTGCAAACCAACTCAGCACGACAAACACCAAAAAGACCATT
GCTCCGGCCACGACAAGACTAAAGGCCACCATCACGGCCAGGGTTCGCACGTGGGGCACGGCCACCATCATGGCCAGGGTTCGCACGTGGCGCATGGCCACCATCACGGC
CAGGTTTCGCACGGGCATCACGGCCATGGCAGTGGCGACGTGCACTGCAAGCCGGCCGGATTGAAGAAAAAGAAGGAACATCACAAAAAGAAAGAAGGGCACAAGACTAA
GAATTCTTGCTCTGACCACAGTAGTAGCGACAGCAGTGATAGCAGCGACGATGAATGTCACAAGAGGAAGAATTGAAAGGAGAATGAAGGCTACTAGATTGAAGGGAATT
AGAGAATTCCTTCAAACTACAACCAACTACTAAAAGTAAAGATATTATCTCATTTCTGTTTGAAATAAAACTTGTGTATCACTACTACCTTTGTTTCGTAATCGATATAT
ATAAAAAGTATAATGTAAAAATGGTATTTTGTGTGTCTTTCAAATTTAGAAATGCACAGAGAAATCTCTATTATTGATCGATATTTATTTTCAGTGTACGGGACACTTAA
TGTATAGAAAAATCTAGCAAAATTGTTACATAGAGAGACCAGAGAGAGCCAATACAAAC
Protein sequenceShow/hide protein sequence
MASQQCCKPTQHDKHQKDHCSGHDKTKGHHHGQGSHVGHGHHHGQGSHVAHGHHHGQVSHGHHGHGSGDVHCKPAGLKKKKEHHKKKEGHKTKNSCSDHSSSDSSDSSDD
ECHKRKN