; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025109 (gene) of Chayote v1 genome

Gene IDSed0025109
OrganismSechium edule (Chayote v1)
Descriptionvacuolar protein sorting-associated protein 2.3
Genome locationLG06:22374728..22382844
RNA-Seq ExpressionSed0025109
SyntenySed0025109
Gene Ontology termsGO:0007034 - vacuolar transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025452.1 Vacuolar protein sorting-associated protein 2-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-2990.48Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

XP_022959704.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbita moschata]5.4e-2990.48Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

XP_022959705.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbita moschata]5.4e-2990.48Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

XP_023513488.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbita pepo subsp. pepo]9.2e-2989.29Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

XP_023513489.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbita pepo subsp. pepo]9.2e-2989.29Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

TrEMBL top hitse value%identityAlignment
A0A0A0K5C0 Uncharacterized protein5.8e-2956.96Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT----------------
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSA KAMSAMNKQM+PVK AKVIREFQKQSAQMDMT                
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT----------------

Query:  --------------ELSIGICNEPSGANR-RTASAGRERIGELGRIDRLIYKVARLRS
                      E+ + + ++ S A + R AS   E +G  G ID L  ++A LR+
Subjt:  --------------ELSIGICNEPSGANR-RTASAGRERIGELGRIDRLIYKVARLRS

A0A5D3D2N2 Vacuolar protein sorting-associated protein 2-like protein 39.9e-2989.29Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSA KAMSAMNKQM+PVK AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

A0A6J1H5L9 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X22.6e-2990.48Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

A0A6J1H8V7 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X12.6e-2990.48Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAGLKSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

A0A6J1KXA1 vacuolar protein sorting-associated protein 2 homolog 3-like4.5e-2989.29Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQIANLQGS AQMRGIATHTQAMHAQTSVAAG+KSAGKAMS MNKQMDP K AKVIREFQKQSAQMDMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

SwissProt top hitse value%identityAlignment
Q0WTY4 Vacuolar protein sorting-associated protein 2 homolog 24.2e-2470.24Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQI NLQGS AQ+RG+ THTQA++A TS+++G+K A KAM AMNKQM P K AKVI++FQKQSAQ+DMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

Q5F3A2 Charged multivesicular body protein 2b1.2e-0736.14Show/hide
Query:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTE
        A K+LA QL++LR+Q        +++  ++T T+ M++Q  +A  + +  K M A+NK+MDP K  + ++ FQK++ +M+MTE
Subjt:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTE

Q6NXD2 Charged multivesicular body protein 2b3.2e-0837.35Show/hide
Query:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTE
        A K+LA QL+++R+Q        +++  ++T T+ M++Q  +A  + +  K M A+NK+MDP K  + ++ FQK++A+MDMTE
Subjt:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTE

Q7SYR0 Charged multivesicular body protein 2b-A1.2e-0736.14Show/hide
Query:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTE
        A K+LA QL++LR+Q        +++  ++T T+ M +Q  +A  + +  K M A+NK+MDP K  + ++ FQK++ +M+MTE
Subjt:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTE

Q941D5 Vacuolar protein sorting-associated protein 2 homolog 31.1e-2784.15Show/hide
Query:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        ATKILA QLIRLRQQIANLQGS AQMRGIATHTQAMHA TSVAAG++ A KAM+AM+K MDP K AKV+REFQKQSAQMDMT
Subjt:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

Arabidopsis top hitse value%identityAlignment
AT1G03950.1 vacuolar protein sorting-associated protein 2.37.5e-2984.15Show/hide
Query:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        ATKILA QLIRLRQQIANLQGS AQMRGIATHTQAMHA TSVAAG++ A KAM+AM+K MDP K AKV+REFQKQSAQMDMT
Subjt:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

AT2G06530.1 SNF7 family protein4.7e-0732.18Show/hide
Query:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTELSIG
        A K++A  LIR R QI       +Q++G++   Q + +  ++   +K   KAM  MN+QM+   L K+++EF++Q+ +M+M    +G
Subjt:  ATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTELSIG

AT5G44560.1 SNF7 family protein3.0e-2570.24Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQI NLQGS AQ+RG+ THTQA++A TS+++G+K A KAM AMNKQM P K AKVI++FQKQSAQ+DMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT

AT5G44560.2 SNF7 family protein3.0e-2570.24Show/hide
Query:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT
        + ATKILA QL+RLRQQI NLQGS AQ+RG+ THTQA++A TS+++G+K A KAM AMNKQM P K AKVI++FQKQSAQ+DMT
Subjt:  QTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTCATTTCTTCAGACAGCAACAAAGATTCTTGCTTGGCAGCTAATCAGGCTCAGACAGCAAATAGCAAACTTACAAGGAAGTCTAGCTCAAATGAGAGGCAT
TGCAACTCATACACAGGCAATGCATGCTCAGACATCTGTTGCTGCTGGCTTGAAGAGTGCCGGGAAAGCAATGTCAGCTATGAATAAGCAAATGGATCCCGTGAAGCTAG
CAAAGGTCATTAGAGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTGAGCTCTCGATCGGTATTTGTAATGAGCCGTCTGGCGCGAACAGGCGAACAGCAAGCGCG
GGTCGCGAACGAATTGGCGAATTGGGGCGAATTGACAGGCTAATATACAAGGTGGCGCGTTTAAGATCACAAAAATGCCTGGTGGCTCGATTGGCAACGACACTCGTCTA
G
mRNA sequenceShow/hide mRNA sequence
CTTCTTTCTTCTTTCCCATCCCTTCACCCAAACCCTAGCCTCCACTTCAACCTGCCGTCGCTGCTGTCTCAGACCCGACCACCGCCTGCACCGCTGCCTATCTCCGCGCG
CAACGCCCCGCGACCGCCCTGCTTCGCCTCACGCCTGCGCACAGCGCCGTTGACGGCGCCTTGCTCAGCCGCGCACGACGCCACGCGACCTCAGCCGCAGACCCTCACCG
ATGACGTCTTTCACCCGCGCGCAGCCACACTCCGCGAGCAGCAGACCCGACCAGTCGCACGCCCCTGTCGCAGCCCCAATGCCCAACCTCGATGCAGTGCCAAACCCCAG
TCGTGCTCACCCCTTTCCAGCAGCCTCACGCACAACCGTTTGATGGGTGGTTTCGATTTCAGACCTGAGGTTGTTTGCTAAGAGGGTGTTGCAGCTCTTGTGGATTCGTG
TTTCGCCAAACATTGGACATCCGTGTTCACTTCCAAATGGTTGGACAAGTCATCTTTCAGGTTGGGTGGATCGTTGTGTTGATTTTTTGGGTTGGGTTTGTTGGATCTAT
CTTGTGATGATTGGTTTGGTTTAAGTTATGGTTCTAATTGCCATGGCTGTTGGATTTTGGTCTTAGTGTTGGAATGGTTAATCTAAGTGTTTCAGTTTGGTTTGATTTGA
TTTCGAAGAATGGTTCTTCTTGGTTTCAAGTGTGTGGTTGAGATTTTGTTGGTTCTTCGTACCTTTGTCAGATAATGAGATAGCTTCGATCACCTTCGGGTTTTAGGTGG
TTCTGTGGTTTGGGTCTTGCCATTGGAGATTGTATTTTTTTTTTTTTTTGAAACCACCATCGGAGATTGTTGTTTGTTTTGTATTGTTGAAAAAGCTGGTAAGGACTATC
TCTACTCGGGTTGTGTGGACCCTGCACAAGGCGAAACTCACTATGCTTCTGATATGTCATGAGTCCCGGGGTGCTATGGTGTATAGAGGAGGAAATTGGAGCATTGCAAT
TAGAAGTACGTGAAGAGCTTGTATAGATGATTTTACTTACTATCATATCAGGAAATAAAGCTTGTTGCAGAGATAAAGAGAACTTCCAAAACAGGAAATGAGTTATTCAT
TTCTTCAGACAGCAACAAAGATTCTTGCTTGGCAGCTAATCAGGCTCAGACAGCAAATAGCAAACTTACAAGGAAGTCTAGCTCAAATGAGAGGCATTGCAACTCATACA
CAGGCAATGCATGCTCAGACATCTGTTGCTGCTGGCTTGAAGAGTGCCGGGAAAGCAATGTCAGCTATGAATAAGCAAATGGATCCCGTGAAGCTAGCAAAGGTCATTAG
AGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTGAGCTCTCGATCGGTATTTGTAATGAGCCGTCTGGCGCGAACAGGCGAACAGCAAGCGCGGGTCGCGAACGAA
TTGGCGAATTGGGGCGAATTGACAGGCTAATATACAAGGTGGCGCGTTTAAGATCACAAAAATGCCTGGTGGCTCGATTGGCAACGACACTCGTCTAG
Protein sequenceShow/hide protein sequence
MSYSFLQTATKILAWQLIRLRQQIANLQGSLAQMRGIATHTQAMHAQTSVAAGLKSAGKAMSAMNKQMDPVKLAKVIREFQKQSAQMDMTELSIGICNEPSGANRRTASA
GRERIGELGRIDRLIYKVARLRSQKCLVARLATTLV