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Sed0025119 (gene) of Chayote v1 genome

Gene IDSed0025119
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:42918210..42918605
RNA-Seq ExpressionSed0025119
SyntenySed0025119
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44055.1 hypothetical protein Csa_015429 [Cucumis sativus]1.6e-2759.26Show/hide
Query:  MLSPPKKGWNRFASKVVSKLGR-FSRPREAISRTTRRFFGHLGTTDPGKRRQCCHCKCHYVGGAHNQPGYWVQVHRSYWNN---NVQEGDEKEDHEGLEF
        ML PPKK WNRFASKV+ KLGR FS+P E+I+RTTRRF   LG++D   RR CC C C      H+QP YW+Q   S+ NN   N     E E+ EG   
Subjt:  MLSPPKKGWNRFASKVVSKLGR-FSRPREAISRTTRRFFGHLGTTDPGKRRQCCHCKCHYVGGAHNQPGYWVQVHRSYWNN---NVQEGDEKEDHEGLEF

Query:  VEDLGELEDEAVDERAEEFIAKFHRSLKLERLQHF
             ELEDEAVDE+AEEFIAKFH SLKLERLQHF
Subjt:  VEDLGELEDEAVDERAEEFIAKFHRSLKLERLQHF
TrEMBL top hitse value%identityAlignment
A0A0A0K332 Uncharacterized protein7.5e-2859.26Show/hide
Query:  MLSPPKKGWNRFASKVVSKLGR-FSRPREAISRTTRRFFGHLGTTDPGKRRQCCHCKCHYVGGAHNQPGYWVQVHRSYWNN---NVQEGDEKEDHEGLEF
        ML PPKK WNRFASKV+ KLGR FS+P E+I+RTTRRF   LG++D   RR CC C C      H+QP YW+Q   S+ NN   N     E E+ EG   
Subjt:  MLSPPKKGWNRFASKVVSKLGR-FSRPREAISRTTRRFFGHLGTTDPGKRRQCCHCKCHYVGGAHNQPGYWVQVHRSYWNN---NVQEGDEKEDHEGLEF

Query:  VEDLGELEDEAVDERAEEFIAKFHRSLKLERLQHF
             ELEDEAVDE+AEEFIAKFH SLKLERLQHF
Subjt:  VEDLGELEDEAVDERAEEFIAKFHRSLKLERLQHF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCACCTCCCAAGAAGGGTTGGAATCGTTTTGCCTCTAAAGTTGTCTCAAAACTAGGTCGGTTTTCGAGGCCCAGGGAAGCCATAAGCCGAACCACACGTCGGTT
TTTTGGCCACCTCGGGACCACGGACCCGGGCAAGAGGCGACAATGCTGCCATTGCAAGTGCCATTACGTCGGCGGTGCGCACAACCAGCCGGGATATTGGGTGCAGGTTC
ATAGGAGTTATTGGAATAATAATGTGCAAGAAGGGGATGAAAAAGAAGATCATGAGGGTTTGGAGTTTGTTGAAGATTTGGGAGAATTAGAAGATGAAGCTGTGGATGAA
AGGGCTGAGGAGTTTATTGCAAAGTTTCATAGAAGTTTGAAGCTTGAGAGATTGCAACATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCACCTCCCAAGAAGGGTTGGAATCGTTTTGCCTCTAAAGTTGTCTCAAAACTAGGTCGGTTTTCGAGGCCCAGGGAAGCCATAAGCCGAACCACACGTCGGTT
TTTTGGCCACCTCGGGACCACGGACCCGGGCAAGAGGCGACAATGCTGCCATTGCAAGTGCCATTACGTCGGCGGTGCGCACAACCAGCCGGGATATTGGGTGCAGGTTC
ATAGGAGTTATTGGAATAATAATGTGCAAGAAGGGGATGAAAAAGAAGATCATGAGGGTTTGGAGTTTGTTGAAGATTTGGGAGAATTAGAAGATGAAGCTGTGGATGAA
AGGGCTGAGGAGTTTATTGCAAAGTTTCATAGAAGTTTGAAGCTTGAGAGATTGCAACATTTTTGA
Protein sequenceShow/hide protein sequence
MLSPPKKGWNRFASKVVSKLGRFSRPREAISRTTRRFFGHLGTTDPGKRRQCCHCKCHYVGGAHNQPGYWVQVHRSYWNNNVQEGDEKEDHEGLEFVEDLGELEDEAVDE
RAEEFIAKFHRSLKLERLQHF