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Sed0025130 (gene) of Chayote v1 genome

Gene IDSed0025130
OrganismSechium edule (Chayote v1)
Descriptionprotein TAPETUM DETERMINANT 1-like
Genome locationLG14:20183453..20184471
RNA-Seq ExpressionSed0025130
SyntenySed0025130
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-4777.05Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA F KLF ALLFVSL+ KGNC+C+ N+I ISQ++TGFQIHGMTEW VTISNNC+CSQS VKLDCKGFQTT+SIDPSILA++DTECLVNNG PIF S P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
         FTYA+DP+F+F+ ISSQIACS
Subjt:  TFTYAKDPQFNFRPISSQIACS

XP_008440637.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]6.9e-4674.59Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA+  KL  ALL +S IS GNC+C+LNNI ISQ++TGFQIHGMTEW VTI+NNCICSQS +KLDCKGF TT SIDPSIL+ISD ECLVNNG PIFNS+P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TF YA+ P+FNF+PISSQI+CS
Subjt:  TFTYAKDPQFNFRPISSQIACS

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]1.4e-4676.23Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA  AKLF ALLFVS +SK N +C L+NI I Q +TGFQIHGMTEW  T+SNNC+CSQS VKLDC+GFQTT+SIDP ILAI+DTECLVNNG PIFNS P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TFTYA++PQFNF+PISSQIACS
Subjt:  TFTYAKDPQFNFRPISSQIACS

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]3.7e-4776.23Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        M +F KL  ALL +SLIS GNC+C LNNI ISQ +TGFQIHGMTEWKVTI+NNCICSQS +KLDCKGF TT SIDPSILAISD+ECLVNNG PIFNS+P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TF YA+ P+FNF+P+SSQI+CS
Subjt:  TFTYAKDPQFNFRPISSQIACS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]9.3e-5180.33Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA+F KL TALL +SL+S GNC+C+LNNI ISQ +TGFQIHGMTEWKVTISNNC CSQS VK+DCKGFQTTESIDPSILA+ DTECLVNNG PIFNS P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TF+YA+DPQFNF+PISSQI+CS
Subjt:  TFTYAKDPQFNFRPISSQIACS

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ6 Uncharacterized protein1.8e-4776.23Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        M +F KL  ALL +SLIS GNC+C LNNI ISQ +TGFQIHGMTEWKVTI+NNCICSQS +KLDCKGF TT SIDPSILAISD+ECLVNNG PIFNS+P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TF YA+ P+FNF+P+SSQI+CS
Subjt:  TFTYAKDPQFNFRPISSQIACS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like3.4e-4674.59Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA+  KL  ALL +S IS GNC+C+LNNI ISQ++TGFQIHGMTEW VTI+NNCICSQS +KLDCKGF TT SIDPSIL+ISD ECLVNNG PIFNS+P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TF YA+ P+FNF+PISSQI+CS
Subjt:  TFTYAKDPQFNFRPISSQIACS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like3.4e-4674.59Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA+  KL  ALL +S IS GNC+C+LNNI ISQ++TGFQIHGMTEW VTI+NNCICSQS +KLDCKGF TT SIDPSIL+ISD ECLVNNG PIFNS+P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TF YA+ P+FNF+PISSQI+CS
Subjt:  TFTYAKDPQFNFRPISSQIACS

A0A6J1HGA0 uncharacterized protein At1g05835-like6.8e-4776.23Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA  AKLF ALLFVS +SK N +C L+NI I Q +TGFQIHGMTEW  T+SNNC+CSQS VKLDC+GFQTT+SIDP ILAI+DTECLVNNG PIFNS P 
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TFTYA++PQFNF+PISSQIACS
Subjt:  TFTYAKDPQFNFRPISSQIACS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like4.1e-4472.13Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA FAKLF ALLFVSL+ KGNC+C+ N+I I Q ++GFQIHGMTEW VTISN C+CSQS VKLDC+GFQTT+SIDPS+LA++D+ECLVNNG PIF S   
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQIACS
        TFTYA DP+F+F+ ISSQI CS
Subjt:  TFTYAKDPQFNFRPISSQIACS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058356.2e-0529.31Show/hide
Query:  ALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNC-ICSQSLVKLDCKGFQTTESIDPS---ILAISDTECLVNNGNPIFNSQPFTFTYA
        ALL + + S   CE   +   + Q  T  +     +++V + N C +C    ++L C+GF  +  +DP+   +L+ S   C+VN+G P+   Q  +F Y+
Subjt:  ALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNC-ICSQSLVKLDCKGFQTTESIDPS---ILAISDTECLVNNGNPIFNSQPFTFTYA

Query:  KDPQFNFRPISSQIAC
           QF  RP+S    C
Subjt:  KDPQFNFRPISSQIAC

Q1G3T1 TPD1 protein homolog 11.8e-0425.49Show/hide
Query:  ECMLNNIIISQELTGFQIHGMTEWKVTISNNCI--CSQSLVKLDCKGFQTTESIDPSILAISD-TECLVNNGNPIFNSQPFTFTYAKDPQFNFRPISSQI
        +C  ++I++ Q  T     G+  + V I N+C+  C+ + + + C  F +   ++P +    D  +CLVN+G P+   Q  +F YA    F++    + +
Subjt:  ECMLNNIIISQELTGFQIHGMTEWKVTISNNCI--CSQSLVKLDCKGFQTTESIDPSILAISD-TECLVNNGNPIFNSQPFTFTYAKDPQFNFRPISSQI

Query:  AC
        +C
Subjt:  AC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein4.4e-0629.31Show/hide
Query:  ALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNC-ICSQSLVKLDCKGFQTTESIDPS---ILAISDTECLVNNGNPIFNSQPFTFTYA
        ALL + + S   CE   +   + Q  T  +     +++V + N C +C    ++L C+GF  +  +DP+   +L+ S   C+VN+G P+   Q  +F Y+
Subjt:  ALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNC-ICSQSLVKLDCKGFQTTESIDPS---ILAISDTECLVNNGNPIFNSQPFTFTYA

Query:  KDPQFNFRPISSQIAC
           QF  RP+S    C
Subjt:  KDPQFNFRPISSQIAC

AT1G32583.1 FUNCTIONS IN: molecular_function unknown1.3e-0525.49Show/hide
Query:  ECMLNNIIISQELTGFQIHGMTEWKVTISNNCI--CSQSLVKLDCKGFQTTESIDPSILAISD-TECLVNNGNPIFNSQPFTFTYAKDPQFNFRPISSQI
        +C  ++I++ Q  T     G+  + V I N+C+  C+ + + + C  F +   ++P +    D  +CLVN+G P+   Q  +F YA    F++    + +
Subjt:  ECMLNNIIISQELTGFQIHGMTEWKVTISNNCI--CSQSLVKLDCKGFQTTESIDPSILAISD-TECLVNNGNPIFNSQPFTFTYAKDPQFNFRPISSQI

Query:  AC
        +C
Subjt:  AC

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.4e-1536.97Show/hide
Query:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF
        MA   K F  +L +S++S G C C    I I    TG +I G  EWKVT+ N C C Q  V L C GF   + + P +L      CL+  G  +      
Subjt:  MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPF

Query:  TFTYAKDPQFNFRPISSQI
         FTYA  P + FRP+ S++
Subjt:  TFTYAKDPQFNFRPISSQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCTTTGCCAAGCTATTCACTGCCCTTCTCTTTGTCTCTCTCATTTCCAAAGGAAATTGTGAATGTATGTTGAACAACATAATAATCAGCCAAGAACTGACTGG
ATTTCAGATCCATGGAATGACAGAGTGGAAAGTGACAATAAGCAACAATTGCATTTGTTCTCAGTCATTAGTGAAGCTTGATTGCAAAGGATTTCAAACTACAGAAAGTA
TTGATCCTTCAATCTTGGCCATTTCTGATACTGAGTGTTTGGTCAATAATGGAAACCCTATTTTCAATTCCCAACCCTTCACCTTCACTTATGCAAAAGACCCACAATTC
AATTTCAGGCCAATTTCTTCCCAAATTGCTTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCTTTGCCAAGCTATTCACTGCCCTTCTCTTTGTCTCTCTCATTTCCAAAGGAAATTGTGAATGTATGTTGAACAACATAATAATCAGCCAAGAACTGACTGG
ATTTCAGATCCATGGAATGACAGAGTGGAAAGTGACAATAAGCAACAATTGCATTTGTTCTCAGTCATTAGTGAAGCTTGATTGCAAAGGATTTCAAACTACAGAAAGTA
TTGATCCTTCAATCTTGGCCATTTCTGATACTGAGTGTTTGGTCAATAATGGAAACCCTATTTTCAATTCCCAACCCTTCACCTTCACTTATGCAAAAGACCCACAATTC
AATTTCAGGCCAATTTCTTCCCAAATTGCTTGTTCTTAA
Protein sequenceShow/hide protein sequence
MAVFAKLFTALLFVSLISKGNCECMLNNIIISQELTGFQIHGMTEWKVTISNNCICSQSLVKLDCKGFQTTESIDPSILAISDTECLVNNGNPIFNSQPFTFTYAKDPQF
NFRPISSQIACS