; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025141 (gene) of Chayote v1 genome

Gene IDSed0025141
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG12:27675725..27679314
RNA-Seq ExpressionSed0025141
SyntenySed0025141
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144563.1 pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus]6.5e-10161.25Show/hide
Query:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS--------------------------------NDRNQRFDQH
        FQ QSR QVSKILSSTI        L+H+PLRTPDFSL P QSRRF+SNSM DD   S                                ++RNQRF++H
Subjt:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS--------------------------------NDRNQRFDQH

Query:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQS----------YPRRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLC
        SEG+S +F NE S S Q SESLS K FSF E FKLNTDN SS   KEK E++            ++ S+P+RPPEADE+F KMKETGLIPNAVAM++GLC
Subjt:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQS----------YPRRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLC

Query:  EDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESG
        +D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC           KAEK DEAIRIFRKMQ NGI PNAFSFGVLIQGLYKCKKL+ AVAF  EMLESG
Subjt:  EDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESG

Query:  HSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFFETR
        H PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W  FF  R
Subjt:  HSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFFETR

XP_008462006.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo]4.6e-9961.26Show/hide
Query:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD--------------------------------PDLSNDRNQRFDQH
        FQFQSR QVSKILSS+I        L+H+PLRTPDFSLSP  SRRFSSNSM DD                                 D  ++RNQRF++H
Subjt:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD--------------------------------PDLSNDRNQRFDQH

Query:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCED
        SEG+S +F NE S S Q SESLS K FSF E FKLNTDN SS   K E+   S P       ++ SQ +RPP ADE+F KMKE+GLIPNAVAM++GLC+D
Subjt:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCED

Query:  QLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS
         LIQEAM+L  LIRE+GTIP VVIYTAVVDGFC           KAEK DEAIRIFRKMQ+ GISPNAFSFGVLIQGLYKCKKL+ AVAF  EMLESGH 
Subjt:  QLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS

Query:  PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W  FF
Subjt:  PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

XP_022136091.1 pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia]1.3e-9860.27Show/hide
Query:  LQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLSN------------------------------------DRN
        LQ Q QSR ++SKI+SS+I        L+H  LRT DFSL P QSR FSSNSM DD  +SN                                    DRN
Subjt:  LQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLSN------------------------------------DRN

Query:  QRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEADELFEKMKETGLIPNAVAMI
        +R ++ SEG+SF+F NE  IS Q SE LS K FSF E FKLNTDN SS  SKEK EQS   RF        SQP+RPPEADE+F+KMKETGLIPNAVAM+
Subjt:  QRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEADELFEKMKETGLIPNAVAMI

Query:  NGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEM
        +GLC+D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC           KAEK DEAIRIFRKMQ NGISPNAFSFGVLIQGLYKC KLE A+ F IEM
Subjt:  NGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEM

Query:  LESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        LESGHSPN+TT VGL+DELCKERG EEA+ VIET KQK  L++EKALR  LNKRA  SP     +W+  F
Subjt:  LESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

XP_022969144.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]2.3e-9859.25Show/hide
Query:  MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------------------------------------PDL
        MGALQ+  Q QSR +VSKIL STI        L+H PLRTPD SLSP++SR FSSNSM DD                                    P  
Subjt:  MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------------------------------------PDL

Query:  SNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSS------GSKEKIEQSYPRRFSQPRRPPEADELFEKMKETGLIPNAV
         ++RNQRF++H EG+  +FANE  +S + SESLS K FSF E FKLNTDN S+S       S  +  +S   + SQP+ PPEADE+F KMKETGLIPNAV
Subjt:  SNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSS------GSKEKIEQSYPRRFSQPRRPPEADELFEKMKETGLIPNAV

Query:  AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFG
        AM++GLC+D LIQEAM+L GLIRE+GTIP VV+YTAVVDGFC           KAE  DEAIRIFRKMQ+NGISPNAFS+GVLIQGLYKCKKLE AV+F 
Subjt:  AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFG

Query:  IEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        IEMLESGHSPNLTTFVGLIDELCKE+GV+EA  VIET KQK  LI+EKALR  LNKRA  SP    ++W+  F
Subjt:  IEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

XP_023554525.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo]4.6e-9959.73Show/hide
Query:  MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------------------------------------PDL
        MGALQ+  Q QSR +VSKILSSTI        L+H PLRTPD SLSP++SR FSSNSM DD                                    P  
Subjt:  MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------------------------------------PDL

Query:  SNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEADELFEKMKETGLIPN
         ++RNQRF++HSEG+S +FANE  +S + +ESLS K FSF E FKLNTDN S+  S EKIE S   +F        SQP+ PPEADE+F KMKETGLIPN
Subjt:  SNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEADELFEKMKETGLIPN

Query:  AVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVA
        AVAM++GLC+D LIQEAM+L GLIRE+GTIP VV+YTAVVDGFC           KAEK DEAIRIFRKMQ+NGISPNAFS+G+LIQGLYK K+LE AV+
Subjt:  AVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVA

Query:  FGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        F IEMLESGHSPNLTTFVGLIDELCKE+G +EA  VIET KQK  LI+EKALR  LNKRA  SP    ++W+  F
Subjt:  FGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

TrEMBL top hitse value%identityAlignment
A0A0A0K6C0 Uncharacterized protein3.1e-10161.25Show/hide
Query:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS--------------------------------NDRNQRFDQH
        FQ QSR QVSKILSSTI        L+H+PLRTPDFSL P QSRRF+SNSM DD   S                                ++RNQRF++H
Subjt:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS--------------------------------NDRNQRFDQH

Query:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQS----------YPRRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLC
        SEG+S +F NE S S Q SESLS K FSF E FKLNTDN SS   KEK E++            ++ S+P+RPPEADE+F KMKETGLIPNAVAM++GLC
Subjt:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQS----------YPRRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLC

Query:  EDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESG
        +D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC           KAEK DEAIRIFRKMQ NGI PNAFSFGVLIQGLYKCKKL+ AVAF  EMLESG
Subjt:  EDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESG

Query:  HSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFFETR
        H PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W  FF  R
Subjt:  HSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFFETR

A0A1S3CFW0 pentatricopeptide repeat-containing protein At4g381502.2e-9961.26Show/hide
Query:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD--------------------------------PDLSNDRNQRFDQH
        FQFQSR QVSKILSS+I        L+H+PLRTPDFSLSP  SRRFSSNSM DD                                 D  ++RNQRF++H
Subjt:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD--------------------------------PDLSNDRNQRFDQH

Query:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCED
        SEG+S +F NE S S Q SESLS K FSF E FKLNTDN SS   K E+   S P       ++ SQ +RPP ADE+F KMKE+GLIPNAVAM++GLC+D
Subjt:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCED

Query:  QLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS
         LIQEAM+L  LIRE+GTIP VVIYTAVVDGFC           KAEK DEAIRIFRKMQ+ GISPNAFSFGVLIQGLYKCKKL+ AVAF  EMLESGH 
Subjt:  QLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS

Query:  PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W  FF
Subjt:  PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

A0A5D3D5J5 Pentatricopeptide repeat-containing protein2.2e-9961.26Show/hide
Query:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD--------------------------------PDLSNDRNQRFDQH
        FQFQSR QVSKILSS+I        L+H+PLRTPDFSLSP  SRRFSSNSM DD                                 D  ++RNQRF++H
Subjt:  FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD--------------------------------PDLSNDRNQRFDQH

Query:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCED
        SEG+S +F NE S S Q SESLS K FSF E FKLNTDN SS   K E+   S P       ++ SQ +RPP ADE+F KMKE+GLIPNAVAM++GLC+D
Subjt:  SEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCED

Query:  QLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS
         LIQEAM+L  LIRE+GTIP VVIYTAVVDGFC           KAEK DEAIRIFRKMQ+ GISPNAFSFGVLIQGLYKCKKL+ AVAF  EMLESGH 
Subjt:  QLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS

Query:  PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W  FF
Subjt:  PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

A0A6J1C2J3 pentatricopeptide repeat-containing protein At4g381506.5e-9960.27Show/hide
Query:  LQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLSN------------------------------------DRN
        LQ Q QSR ++SKI+SS+I        L+H  LRT DFSL P QSR FSSNSM DD  +SN                                    DRN
Subjt:  LQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLSN------------------------------------DRN

Query:  QRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEADELFEKMKETGLIPNAVAMI
        +R ++ SEG+SF+F NE  IS Q SE LS K FSF E FKLNTDN SS  SKEK EQS   RF        SQP+RPPEADE+F+KMKETGLIPNAVAM+
Subjt:  QRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEADELFEKMKETGLIPNAVAMI

Query:  NGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEM
        +GLC+D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC           KAEK DEAIRIFRKMQ NGISPNAFSFGVLIQGLYKC KLE A+ F IEM
Subjt:  NGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEM

Query:  LESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        LESGHSPN+TT VGL+DELCKERG EEA+ VIET KQK  L++EKALR  LNKRA  SP     +W+  F
Subjt:  LESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

A0A6J1I1Q2 pentatricopeptide repeat-containing protein At4g38150-like1.1e-9859.25Show/hide
Query:  MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------------------------------------PDL
        MGALQ+  Q QSR +VSKIL STI        L+H PLRTPD SLSP++SR FSSNSM DD                                    P  
Subjt:  MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------------------------------------PDL

Query:  SNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSS------GSKEKIEQSYPRRFSQPRRPPEADELFEKMKETGLIPNAV
         ++RNQRF++H EG+  +FANE  +S + SESLS K FSF E FKLNTDN S+S       S  +  +S   + SQP+ PPEADE+F KMKETGLIPNAV
Subjt:  SNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSS------GSKEKIEQSYPRRFSQPRRPPEADELFEKMKETGLIPNAV

Query:  AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFG
        AM++GLC+D LIQEAM+L GLIRE+GTIP VV+YTAVVDGFC           KAE  DEAIRIFRKMQ+NGISPNAFS+GVLIQGLYKCKKLE AV+F 
Subjt:  AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFG

Query:  IEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF
        IEMLESGHSPNLTTFVGLIDELCKE+GV+EA  VIET KQK  LI+EKALR  LNKRA  SP    ++W+  F
Subjt:  IEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFF

SwissProt top hitse value%identityAlignment
Q76C99 Protein Rf1, mitochondrial2.3e-1628.24Show/hide
Query:  EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAF
        E+++LFE M   G+ PN +    +ING C    + EAM+LL  +   G  P  V Y+ +++G+C           K  + ++A+ +F++M+S+G+SP+  
Subjt:  EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAF

Query:  SFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEK
        ++ +++QGL++ ++   A    + + ESG    L+T+  ++  LCK +  ++A ++     Q + L+D K
Subjt:  SFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEK

Q9CAN5 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial1.8e-1627.72Show/hide
Query:  FSQPRRPPEADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQS
        F++  +  EA++LF++M +  + PN V   ++ING C    + EA ++  L+  +  +P VV Y  +++GFC           KA+K  + + +FR M  
Subjt:  FSQPRRPPEADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQS

Query:  NGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWD
         G+  N  ++  LI G ++    + A     +M+  G  PN+ T+  L+D LCK   +E+A  V E + QK S ++     Y +         +++  WD
Subjt:  NGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWD

Query:  FF
         F
Subjt:  FF

Q9FIT7 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial3.0e-1629.89Show/hide
Query:  ADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFS
        AD+  ++M+E G++PN V    +IN  C+   + EA      + ++G +     YT +++G             K +K D+A  IFR+M+  GI+P+ FS
Subjt:  ADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFS

Query:  FGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYC
        +GVLI G  K   ++ A +   EM+E G +PN+  +  L+   C+   +E+AK +++  +  V  +   A+ YC
Subjt:  FGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYC

Q9SXD1 Pentatricopeptide repeat-containing protein At1g62670, mitochondrial3.0e-1626.8Show/hide
Query:  EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAF
        EA++L+++M +  + P+ V   ++ING C    + EA ++   +  +   P VV Y  ++ GFC           K ++ +E + +FR+M   G+  N  
Subjt:  EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAF

Query:  SFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFF
        ++ +LIQGL++    + A     EM+  G  PN+ T+  L+D LCK   +E+A  V E  ++  S ++     Y +         +++  WD F
Subjt:  SFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFF

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381501.9e-5554.5Show/hide
Query:  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTA
        +LS  GF   E FKL  +  S    K    + YP+   +P  PPE +DE+F+KMKE GLIPNAVAM++GLC+D L+QEAM+L GL+R++GTIP VVIYTA
Subjt:  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTA

Query:  VVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIE
        VV+ FC           KA K ++A RIFRKMQ+NGI+PNAFS+GVL+QGLY C  L+ AVAF  EMLESGHSPN+ TFV L+D LC+ +GVE+A+  I+
Subjt:  VVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIE

Query:  TFKQKVSLIDEKALRYCLNKRA
        T  QK   ++ KA++  ++KRA
Subjt:  TFKQKVSLIDEKALRYCLNKRA

Arabidopsis top hitse value%identityAlignment
AT1G62670.1 rna processing factor 22.1e-1726.8Show/hide
Query:  EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAF
        EA++L+++M +  + P+ V   ++ING C    + EA ++   +  +   P VV Y  ++ GFC           K ++ +E + +FR+M   G+  N  
Subjt:  EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAF

Query:  SFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFF
        ++ +LIQGL++    + A     EM+  G  PN+ T+  L+D LCK   +E+A  V E  ++  S ++     Y +         +++  WD F
Subjt:  SFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFF

AT1G63080.1 Pentatricopeptide repeat (PPR) superfamily protein1.2e-1727.72Show/hide
Query:  FSQPRRPPEADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQS
        F++  +  EA++LF++M +  + PN V   ++ING C    + EA ++  L+  +  +P VV Y  +++GFC           KA+K  + + +FR M  
Subjt:  FSQPRRPPEADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQS

Query:  NGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWD
         G+  N  ++  LI G ++    + A     +M+  G  PN+ T+  L+D LCK   +E+A  V E + QK S ++     Y +         +++  WD
Subjt:  NGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWD

Query:  FF
         F
Subjt:  FF

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-5654.5Show/hide
Query:  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTA
        +LS  GF   E FKL  +  S    K    + YP+   +P  PPE +DE+F+KMKE GLIPNAVAM++GLC+D L+QEAM+L GL+R++GTIP VVIYTA
Subjt:  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTA

Query:  VVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIE
        VV+ FC           KA K ++A RIFRKMQ+NGI+PNAFS+GVL+QGLY C  L+ AVAF  EMLESGHSPN+ TFV L+D LC+ +GVE+A+  I+
Subjt:  VVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIE

Query:  TFKQKVSLIDEKALRYCLNKRA
        T  QK   ++ KA++  ++KRA
Subjt:  TFKQKVSLIDEKALRYCLNKRA

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein1.4e-5654.5Show/hide
Query:  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTA
        +LS  GF   E FKL  +  S    K    + YP+   +P  PPE +DE+F+KMKE GLIPNAVAM++GLC+D L+QEAM+L GL+R++GTIP VVIYTA
Subjt:  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTA

Query:  VVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIE
        VV+ FC           KA K ++A RIFRKMQ+NGI+PNAFS+GVL+QGLY C  L+ AVAF  EMLESGHSPN+ TFV L+D LC+ +GVE+A+  I+
Subjt:  VVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIE

Query:  TFKQKVSLIDEKALRYCLNKRA
        T  QK   ++ KA++  ++KRA
Subjt:  TFKQKVSLIDEKALRYCLNKRA

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein3.4e-2331.98Show/hide
Query:  QPRRPPEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISP
        +P  P    E+F KM+  G    AV M + L +D    EA+EL   I+++  +P VV +TA+V+ +             A +  E +++F +M ++G+SP
Subjt:  QPRRPPEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISP

Query:  NAFSFGVLIQGLYKCKKL-EGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLN-KRASVSPTEMKYLWD
        NA+++ VLI+GL    K  + A  + +EM+ +G SPN  T+  + +   +E   E A+ +++  K K  + DEKA+R  L  KR  V  T +  L+D
Subjt:  NAFSFGVLIQGLYKCKKL-EGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLN-KRASVSPTEMKYLWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTC
ACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGT
TTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGT
AGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAAT
TCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGA
TTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAG
AGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATC
TGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTAT
CCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACA
CCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACT
GTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTC
ACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGT
TTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGT
AGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAAT
TCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGA
TTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAG
AGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATC
TGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTAT
CCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACA
CCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACT
GTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA
Protein sequenceShow/hide protein sequence
MGALQLQFQFQSRFQVSKILSSTISLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLSNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSS
SGSKEKIEQSYPRRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQ
SNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFFETRVIT
PVPRPHTEDIERVMSQVSLELGTLKGAYLQSPRCQPLCHFLGTVSLGEFYLSILLDYLDERNKRFFQE