CuGenDBv2

Gene ID	Sed0025157
Organism	Sechium edule (Chayote v1)
Description	ribosome biogenesis protein bms1-like
Genome location	LG01:21377802..21381169
RNA-Seq Expression	Sed0025157
Synteny	Sed0025157
Gene Ontology terms	GO:0042254 - ribosome biogenesis (biological process)
InterPro domains	IPR007034 - Ribosome biogenesis protein BMS1/TSR1, C-terminal IPR039761 - Ribosome biogenesis protein Bms1/Tsr1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022932481.1 ribosome biogenesis protein BMS1 homolog [Cucurbita moschata]

1.1e-105

65.18

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGRIW GMKT  ELRKEHNLPI VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRK+KEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

XP_022972872.1 ribosome biogenesis protein bms1-like [Cucurbita maxima]

4.3e-105

64.9

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGR+W GMKT  ELRKEHNLP+ VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRKIKEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

XP_022972901.1 ribosome biogenesis protein bms1-like [Cucurbita maxima]

6.6e-106

65.46

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGRIW GMKT  ELRKEHNLPI VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRKIKEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

XP_023520887.1 ribosome biogenesis protein BMS1 homolog [Cucurbita pepo subsp. pepo]

5.6e-105

64.9

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GGLPKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGRIW GMKT  ELRKEH+LPI VNKDSVYK              PK+      FKSKPKD PSQ RP+LEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRKIKEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RK+IRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

XP_023524837.1 LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1 homolog [Cucurbita pepo subsp. pepo]

6.6e-106

65.46

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGRIW GMKT  ELRKEHNLPI VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRKIKEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8M0 DUF663 domain-containing protein

1.9e-103

61.83

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Query:  ENTKVHGSQSLN-LVRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH-------------------------------------------
        + TK HG   ++ +VRLKRHRWYKKVLKTRDPLIFSIGWRR+QSTP+YAIEDSNGRH                                           
Subjt:  ENTKVHGSQSLN-LVRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH-------------------------------------------

Query:  ---LTVLQSNHKEQAVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDV
            TVLQSNH+E+ VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG PKEGIARCTFEDKIRMSD+
Subjt:  ---LTVLQSNHKEQAVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDV

Query:  VFL----------LLKPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAV
        VFL             PLTT LQPR R+W GMKT  ELRKEHNLPI +NKDS+YK              PK+      FKSKPK+TP Q RPLLEKRRAV
Subjt:  VFL----------LLKPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAV

Query:  VMEPHNRKVHALV-----------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIR
        VMEP +RKVHALV           KKRK+KEEKKR  LEAE+AK EQL+KKRQR+ERR+RYREQDK +KKIR
Subjt:  VMEPHNRKVHALV-----------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIR

A0A6J1EVJ8 ribosome biogenesis protein bms1-like

1.8e-104

64.71

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALI+DMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGRIW GMKT  ELRKEHNLPI VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIR
                 KKRK+KEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIR
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIR

A0A6J1EWH1 ribosome biogenesis protein BMS1 homolog

5.5e-106

65.18

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGRIW GMKT  ELRKEHNLPI VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRK+KEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

A0A6J1I602 ribosome biogenesis protein bms1-like

2.1e-105

64.9

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGR+W GMKT  ELRKEHNLP+ VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRKIKEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

A0A6J1I782 ribosome biogenesis protein bms1-like

3.2e-106

65.46

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA
        VRLKRHRW+KKVLKTRDPLIFS+GWRRFQSTP+YAIEDSNGRH                                              TVLQSNH+E+ 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL
        VKKIKLVGYPCKIFKKTALIKDMFT DLEIARFEGASVRTVSGI GQVKK    EIG Q KK GG+PKEGIARCTFEDKIRMSDVVFL            
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKK----EIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LL

Query:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--
         PLTT LQPRGRIW GMKT  ELRKEHNLPI VNKDSVYK              PK+      FKSKPKD PSQ RPLLEKRRAVVMEP  RKVHALV  
Subjt:  KPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV--

Query:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG
                 KKRKIKEEKKR  LEAENAKNEQL+KKRQR+ERR+RYR++DK RKKIRSG
Subjt:  ---------KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

SwissProt top hits

e value

%identity

Alignment

O94653 Ribosome biogenesis protein bms1

4.9e-35

34.11

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGR---------HL---------------------------------------TVLQSNHK
        VR+KRHRW+KK+LKT DPLIFS+GWRRFQS P+Y+I DS  R         H+                                       +VL  +  
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGR---------HL---------------------------------------TVLQSNHK

Query:  EQAVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLK
           VKK+KL G P KIFK TA IK MF+  LE+A+FEGA++RTVSGI GQVKK + ++          G  R TFEDKI MSD+VFL             
Subjt:  EQAVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLK

Query:  PLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVY-------------KFPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALVKK-
         +T  L+     W+GM+  GE+R E  L   +  +S Y             K P +      F S+ K    + +P   ++R V++    RKV  L++K 
Subjt:  PLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVY-------------KFPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALVKK-

Query:  RKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRK
          +  +K+      + A++E+  K+ Q++E+   Y E+ +  K
Subjt:  RKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRK

Q08965 Ribosome biogenesis protein BMS1

2.7e-33

33.04

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Query:  RLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDS-------------------------------------------NGRHLT----VLQSNHKEQ
        RL+RHRW+KK+LKT DPL+ S+GWRRFQ+ PIY   DS                                           NG  +     V + +   +
Subjt:  RLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDS-------------------------------------------NGRHLT----VLQSNHKEQ

Query:  AVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLKPL
         VKK+KLVG+P KIFK TA IKDMF+  +E+ARFEGA ++TVSGI G++K+ + K          EG  R  FEDKI MSD+V L             P+
Subjt:  AVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLKPL

Query:  TTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVY-------------KFPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALVKK---
        T+ L      W G++  G++R   NL    N DS Y             K PKA      FKS+      Q +     +RAVV+    +K  + ++K   
Subjt:  TTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVY-------------KFPKA------FKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALVKK---

Query:  -RKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKK
          K K+ K++   +  + + E+L K  + +E +    ++DK +KK
Subjt:  -RKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKK

Q14692 Ribosome biogenesis protein BMS1 homolog

9.8e-44

37.29

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Query:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGR---------HL------------------------------------TVLQSNHKEQA
        +RLK+HRWYKK+LK+RDP+IFS+GWRRFQ+ P+Y IED NGR         H+                                     VL  +   + 
Subjt:  VRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGR---------HL------------------------------------TVLQSNHKEQA

Query:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLKPLT
        VKK+KL G+P KIFK T+ IK MF   LE+A+FEGA +RTVSGI GQ+KK +            EG  R +FEDK+ MSD+VF+             P+T
Subjt:  VKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLKPLT

Query:  TTLQPRGR--IWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRR-AVVMEPHNRKVHALV---
        + L+P G    W GM+T G+LR  H + +  NKDS+YK              PKA      FK+KPK      +   ++RR AV+ EPH RK+ AL+   
Subjt:  TTLQPRGR--IWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPKA------FKSKPKDTPSQPRPLLEKRR-AVVMEPHNRKVHALV---

Query:  ------KKRKIKEEKKRNLLEAENA--KNEQLTKKRQRDERRDRYREQDKSRKK
              K +K KE++  +  E   A  K E+   KRQ+D R+  +R Q +  ++
Subjt:  ------KKRKIKEEKKRNLLEAENA--KNEQLTKKRQRDERRDRYREQDKSRKK

Q2NL82 Pre-rRNA-processing protein TSR1 homolog

4.7e-06

22.46

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Query:  LNLVRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYA--------------------------------------IEDSNGRHLTV-----LQSNHKEQ
        LN+V ++R     + +K ++ LIF  G+RRF+++P+++                                       + SNG H  +     +  +    
Subjt:  LNLVRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYA--------------------------------------IEDSNGRHLTV-----LQSNHKEQ

Query:  AVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFLLL
         +K++ L G+P KIF K A+++ MF    ++  F+   +RT  G  G +K+ +G            G  +C+F+ K++  D V + L
Subjt:  AVKKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFLLL

Q5XGY1 Pre-rRNA-processing protein TSR1 homolog

1.2e-06

21.98

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Query:  LKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRHL-------------------------------------------TVLQSNHKEQAVKKI
        ++RH    + +K ++ LIF  G+RRF+++P+++   S  +H                                            ++L  N     +K+I
Subjt:  LKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRHL-------------------------------------------TVLQSNHKEQAVKKI

Query:  KLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFLLL
         L G+P KI K+TA+++ MF    ++  F+   +RT  G  G +K+ +G            G  +C F+ +++  D V + L
Subjt:  KLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFLLL

Arabidopsis top hits

e value

%identity

Alignment

AT1G06720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

3.6e-78

50.85

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Query:  RLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQAV
        RLK+HRW+KKVLKTRDP+I SIGWRR+Q+ P++AIED NGRH                                               VL+ NH+ + V
Subjt:  RLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRH---------------------------------------------LTVLQSNHKEQAV

Query:  KKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLKPLTT
        KKIKLVG PCKI KKTA IKDMFT DLEIARFEG+SVRTVSGI GQVKK  GK +  N    +EGIARCTFED+I MSD+VFL             PLTT
Subjt:  KKIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFL----------LLKPLTT

Query:  TLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPK------AFKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV-------
         LQPR + W+GMKT GELR+E N+PI VNKDS+YK              PK       F SKPK+ P + RP LE +RAV+MEP  RK H ++       
Subjt:  TLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYK-------------FPK------AFKSKPKDTPSQPRPLLEKRRAVVMEPHNRKVHALV-------

Query:  ----KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIR
            KK+K  ++KKR   EAE AKNE++ KKR+R+ERRDRYRE+DK +KK R
Subjt:  ----KKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIR

AT1G42440.1 FUNCTIONS IN: molecular_function unknown

3.2e-05

22.28

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Query:  LKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIED-SNGRH--------------------------LTVLQSNH------------------KEQAVK
        +K++  Y+  +KT++ L+F +G+R+F + P++A ++ S+ +H                          L VL+ +                    +  +K
Subjt:  LKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIED-SNGRH--------------------------LTVLQSNH------------------KEQAVK

Query:  KIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFLLL
        KI L GYP ++ K  A ++ MF    ++  F+   V +  G  G+VK+ +G            G  +C F   ++  DVV + L
Subjt:  KIKLVGYPCKIFKKTALIKDMFTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFLLL

Sequences

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CDS sequence

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ATGCTCCTATTTTCCTTCGTGGTATTGTTCTTTGTTTCATCTTTTTGGGGGGAAATTGAAAATACAAAGGTCCATGGATCTCAATCATTAAATTTAGTTAGATTAAAACG
ACATAGGTGGTACAAAAAGGTACTGAAGACTAGAGATCCATTAATTTTTTCTATTGGGTGGAGACGTTTCCAAAGTACCCCTATTTATGCAATTGAAGATTCAAACGGGA
GGCACCTTACTGTGCTCCAATCCAATCACAAAGAGCAGGCGGTGAAGAAAATCAAGCTAGTTGGTTATCCATGCAAAATTTTCAAGAAGACGGCACTTATAAAAGATATG
TTTACTTTAGACCTTGAAATAGCTCGTTTCGAAGGTGCATCTGTTCGAACTGTCAGTGGAATCCCGGGCCAGGTCAAGAAGGAGATCGGTAAGCAGCTCAAAAAGAATGG
AGGACTACCCAAGGAAGGGATTGCTAGGTGTACCTTCGAGGACAAGATTCGGATGAGTGACGTAGTTTTCTTGCTTCTAAAGCCATTGACGACGACATTGCAACCTCGTG
GTCGGATATGGCATGGGATGAAAACTGCTGGTGAACTGAGGAAAGAACATAATCTTCCCATTCATGTGAACAAGGATTCGGTTTACAAGTTCCCAAAGGCATTTAAATCA
AAGCCAAAGGATACACCTAGTCAGCCGAGGCCACTTCTCGAAAAGCGAAGAGCTGTCGTTATGGAGCCTCACAATCGAAAAGTTCACGCTCTTGTGAAGAAACGAAAGAT
CAAAGAAGAAAAGAAGAGAAATTTGCTCGAAGCCGAGAATGCCAAAAACGAGCAACTGACTAAAAAGCGGCAAAGAGATGAACGACGAGATAGATATAGAGAACAAGATA
AATCGAGAAAGAAAATTAGAAGTGGGTGA

mRNA sequence

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Protein sequence

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MLLFSFVVLFFVSSFWGEIENTKVHGSQSLNLVRLKRHRWYKKVLKTRDPLIFSIGWRRFQSTPIYAIEDSNGRHLTVLQSNHKEQAVKKIKLVGYPCKIFKKTALIKDM
FTLDLEIARFEGASVRTVSGIPGQVKKEIGKQLKKNGGLPKEGIARCTFEDKIRMSDVVFLLLKPLTTTLQPRGRIWHGMKTAGELRKEHNLPIHVNKDSVYKFPKAFKS
KPKDTPSQPRPLLEKRRAVVMEPHNRKVHALVKKRKIKEEKKRNLLEAENAKNEQLTKKRQRDERRDRYREQDKSRKKIRSG

Sed0025157 (gene) of Chayote v1 genome