; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025166 (gene) of Chayote v1 genome

Gene IDSed0025166
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:29511858..29514177
RNA-Seq ExpressionSed0025166
SyntenySed0025166
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580688.1 hypothetical protein SDJN03_20690, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0860.94Show/hide
Query:  LHDHGSVSCSFTASYFSSSLHDSSVSVRLRFHRRVNPRLRFHPSYKKNGLFSFISSLWHLSRSY
        +H    +  S T+S FSSSLHDS+VSVR  FHRR++ RLR +PSYK+NG+F+ ISSL +LSRSY
Subjt:  LHDHGSVSCSFTASYFSSSLHDSSVSVRLRFHRRVNPRLRFHPSYKKNGLFSFISSLWHLSRSY
KAG7017445.1 hypothetical protein SDJN02_19310 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-0457.69Show/hide
Query:  LHDHGSVSCSFTASYFSSSLHDSSVSVRLRFHRRVNPRLRFHPSYKKNGLFS
        +H    +  S T+S FSSSLHDS+VSVR  FHRR++ RLR +PSYK+NG+F+
Subjt:  LHDHGSVSCSFTASYFSSSLHDSSVSVRLRFHRRVNPRLRFHPSYKKNGLFS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTCCAAGGGGGGCCATCATCTTCTTAGCTCTGCCTCCAACATCATACCTCGGCGACGTGAAATTCAAGCTTCACACTTACTTTGATCAGACCCACATGGAACC
TTCTCAGAATTTTTATTCCTACTATAGTTTGAAAATTACAATGCATCAAGAAATTGATGAAGCCATTATAATTACCAAAATAAACAGAGTTCCAATCTCTCGTCACGAGG
CTGTTCGAAGAAATTGCAAATTCCGACTCAACTCGGCGTTCACAAGGTGGCGAGTGATCGGAAGCAACGCGGATCTGAACCGTGAACTCAACGGAAAGCGATTCAAGAAA
TCCAACAATGGAGGAGGAAGGTTGTTCGATCTCCAGAGCAGTGGCGGCGACGGCCTGCACGACCATGGCTCTGTAAGTTGTTCGTTTACCGCCTCCTACTTCTCTTCAAG
TTTACACGATTCGTCGGTTTCTGTGCGCCTTCGTTTCCACCGCCGCGTCAATCCTCGTCTGCGCTTTCATCCTTCCTATAAGAAGAATGGACTTTTCTCTTTTATTAGCA
GCTTATGGCATTTGAGCAGATCATATTTCTGCAGATTGGAAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTCCAAGGGGGGCCATCATCTTCTTAGCTCTGCCTCCAACATCATACCTCGGCGACGTGAAATTCAAGCTTCACACTTACTTTGATCAGACCCACATGGAACC
TTCTCAGAATTTTTATTCCTACTATAGTTTGAAAATTACAATGCATCAAGAAATTGATGAAGCCATTATAATTACCAAAATAAACAGAGTTCCAATCTCTCGTCACGAGG
CTGTTCGAAGAAATTGCAAATTCCGACTCAACTCGGCGTTCACAAGGTGGCGAGTGATCGGAAGCAACGCGGATCTGAACCGTGAACTCAACGGAAAGCGATTCAAGAAA
TCCAACAATGGAGGAGGAAGGTTGTTCGATCTCCAGAGCAGTGGCGGCGACGGCCTGCACGACCATGGCTCTGTAAGTTGTTCGTTTACCGCCTCCTACTTCTCTTCAAG
TTTACACGATTCGTCGGTTTCTGTGCGCCTTCGTTTCCACCGCCGCGTCAATCCTCGTCTGCGCTTTCATCCTTCCTATAAGAAGAATGGACTTTTCTCTTTTATTAGCA
GCTTATGGCATTTGAGCAGATCATATTTCTGCAGATTGGAAAGGTGA
Protein sequenceShow/hide protein sequence
MDSPRGAIIFLALPPTSYLGDVKFKLHTYFDQTHMEPSQNFYSYYSLKITMHQEIDEAIIITKINRVPISRHEAVRRNCKFRLNSAFTRWRVIGSNADLNRELNGKRFKK
SNNGGGRLFDLQSSGGDGLHDHGSVSCSFTASYFSSSLHDSSVSVRLRFHRRVNPRLRFHPSYKKNGLFSFISSLWHLSRSYFCRLER