; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025194 (gene) of Chayote v1 genome

Gene IDSed0025194
OrganismSechium edule (Chayote v1)
Descriptionzinc finger CCHC domain-containing protein 10 isoform X1
Genome locationLG03:46521359..46524298
RNA-Seq ExpressionSed0025194
SyntenySed0025194
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595282.1 hypothetical protein SDJN03_11835, partial [Cucurbita argyrosperma subsp. sororia]9.7e-7168.77Show/hide
Query:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS
        +T KE+ QWS KKME+GEGLKTLECLRGRLLAERQASRSAKEE E+MGKKLIELEN+IRKETE R KAE+RL+LL+KKLESLNI STS TSENSNS+EIS
Subjt:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS

Query:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI
        T NS+ATKE   QESRS+ +LVS+IS+N+ EK  EI  + KPNQI      SSPNSKSPNN   D   SSQISQ+K QSFSAE KERE E+Y+DKLAA +
Subjt:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI

Query:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM
         GA+PAA       K+KGIHE  T++ DA+K+  IRGNV+  F RRN MKAIM
Subjt:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM

KAG7027294.1 hypothetical protein SDJN02_11306 [Cucurbita argyrosperma subsp. argyrosperma]9.7e-7169.17Show/hide
Query:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS
        +T KE+ QWS KKME+GEGLKTLECLRGRLLAERQASRSAKEE E+MGKKLIELEN+IRKETE R KAE+RL+LL+KKLESLNI STS TSENSNS+EIS
Subjt:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS

Query:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI
        T NSSATKE   QESRS+ +LVS+IS+N+ EK  EI  + KPNQI      SSPNSKSPNN   D   SSQISQ+K QSFSAE KERE E+Y DKLAA +
Subjt:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI

Query:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM
         GA+PAA       K+KGIHE  T++ DA+K+  IRGNV+  F RRN MKAIM
Subjt:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM

XP_022962995.1 uncharacterized protein LOC111463336 [Cucurbita moschata]5.7e-7169.17Show/hide
Query:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS
        +T KE+ QWS KKME+GEGLKTLECLRGRLLAERQASRSAKEE E+MGKKLIELEN+IRKETE R KAE+RL+LL+KKLESLNI STS TSENSNS+EIS
Subjt:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS

Query:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI
        T NSSATKE   QESRS+ +LVS+IS+N+ EK  EI  + KPNQI      SSPNSKSPNN   D   SSQISQ+K QSFSAE KERE E+Y+DKLAA +
Subjt:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI

Query:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM
         GA+PAA       K+KGIHE  T++ DA+K+  IRGNV+  F RRN MKAIM
Subjt:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM

XP_022972763.1 uncharacterized protein LOC111471273 [Cucurbita maxima]2.0e-7169.96Show/hide
Query:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS
        +T KE+ QWS KKME+GEGLKTLECLRGRLLAERQASRSAKEE ELMG+KLIELEN+IRKETE RNKAE+RL+LL+KKLESLNI STS TSENSNS+EIS
Subjt:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS

Query:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI
        T NSSATKE   QESRS+ +LVS+IS N+GEK  EI  + KPNQI      SSPNSKSPNN   D   S QISQ+K QSFSAE KERE E+Y+DKLAA  
Subjt:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI

Query:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM
         GA+PAA      MK+KGIHE  T++ DA+K+  IRGNV+  F RRN MKAIM
Subjt:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM

XP_023518548.1 uncharacterized protein LOC111782021 [Cucurbita pepo subsp. pepo]9.7e-7169.57Show/hide
Query:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS
        +T KE+ QWS KK+E GEGLKTLECLRGRLLAERQASRSAKEE ELMGKKLIELEN+IRKETE RNKAE+RL+LL+KKLESLNI STS TS+NSNS+EIS
Subjt:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS

Query:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI
        T NSSATKE   QESRS+ +LVS+IS+N+GEK  EI  + KPNQI      SSPNSKS NN   D   SSQISQ+K QSFSAE KERE E+Y+DK+AA +
Subjt:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI

Query:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM
         GA+PAA      MK+KGIHE  TE+ DA+K+  IRGNV+  F RRN MKAIM
Subjt:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM

TrEMBL top hitse value%identityAlignment
A0A0A0KXC4 Uncharacterized protein2.4e-6764.73Show/hide
Query:  MMSTYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSE
        MM+T KE  QWS  KME+ +GLKTLECLRGRLLAERQASRSAKEE ELMG+KL++LEN+I+KETELRNKAEKRL+LLIKKLESLN  STS T   S +SE
Subjt:  MMSTYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSE

Query:  ISTKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITT-----EKKPN-----QIRSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYM
        IST +S  +     QES+S+K LVS+I +NQ +K   ITT     EKKPN     ++ SSPNS+SPNN YID + +S+I   KDQSFS EVKER  E+Y+
Subjt:  ISTKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITT-----EKKPN-----QIRSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYM

Query:  DKLAAPITGASPAAKSEAGAMKLKGIHESTTEIHDALKRIRGNVESSFGRRNHMKAIM
        D LA  + GA+P A SE GAMK+K IHE  TE+HDALK IRGNV+SSF RRNHMKAI+
Subjt:  DKLAAPITGASPAAKSEAGAMKLKGIHESTTEIHDALKRIRGNVESSFGRRNHMKAIM

A0A1S3BHR6 uncharacterized protein LOC1034897691.5e-6966.28Show/hide
Query:  MMSTYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSE
        MM+T KE+ QWS  KM++ +GLKTLECLRGRLLAERQASRSAKEE ELMG+KL++LEN+IRKETELRNKAEKRL+LLIKKLESLN  STS T   S +SE
Subjt:  MMSTYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSE

Query:  ISTKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITT-----EKKPN-----QIRSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYM
        IST NSS +KE   QE +S+K LVS+I ENQ +K   ITT     EKKPN     ++ S PNS+SPNNFYID R +S+I   KDQSFS EVKER  ++Y+
Subjt:  ISTKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITT-----EKKPN-----QIRSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYM

Query:  DKLAAPITGASPAAKSEAGAMKLKGIHESTTEIHDALKRIRGNVESSFGRRNHMKAIM
        D LA  + GA+P A SE GAMK+K IHE  TE+HDALK IRGNV+SSF RRNHMKAI+
Subjt:  DKLAAPITGASPAAKSEAGAMKLKGIHESTTEIHDALKRIRGNVESSFGRRNHMKAIM

A0A5A7TZE9 Zinc finger CCHC domain-containing protein 101.5e-6966.28Show/hide
Query:  MMSTYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSE
        MM+T KE+ QWS  KM++ +GLKTLECLRGRLLAERQASRSAKEE ELMG+KL++LEN+IRKETELRNKAEKRL+LLIKKLESLN  STS T   S +SE
Subjt:  MMSTYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSE

Query:  ISTKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITT-----EKKPN-----QIRSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYM
        IST NSS +KE   QE +S+K LVS+I ENQ +K   ITT     EKKPN     ++ S PNS+SPNNFYID R +S+I   KDQSFS EVKER  ++Y+
Subjt:  ISTKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITT-----EKKPN-----QIRSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYM

Query:  DKLAAPITGASPAAKSEAGAMKLKGIHESTTEIHDALKRIRGNVESSFGRRNHMKAIM
        D LA  + GA+P A SE GAMK+K IHE  TE+HDALK IRGNV+SSF RRNHMKAI+
Subjt:  DKLAAPITGASPAAKSEAGAMKLKGIHESTTEIHDALKRIRGNVESSFGRRNHMKAIM

A0A6J1HGR0 uncharacterized protein LOC1114633362.8e-7169.17Show/hide
Query:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS
        +T KE+ QWS KKME+GEGLKTLECLRGRLLAERQASRSAKEE E+MGKKLIELEN+IRKETE R KAE+RL+LL+KKLESLNI STS TSENSNS+EIS
Subjt:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS

Query:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI
        T NSSATKE   QESRS+ +LVS+IS+N+ EK  EI  + KPNQI      SSPNSKSPNN   D   SSQISQ+K QSFSAE KERE E+Y+DKLAA +
Subjt:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI

Query:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM
         GA+PAA       K+KGIHE  T++ DA+K+  IRGNV+  F RRN MKAIM
Subjt:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM

A0A6J1IB17 uncharacterized protein LOC1114712739.5e-7269.96Show/hide
Query:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS
        +T KE+ QWS KKME+GEGLKTLECLRGRLLAERQASRSAKEE ELMG+KLIELEN+IRKETE RNKAE+RL+LL+KKLESLNI STS TSENSNS+EIS
Subjt:  STYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEIS

Query:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI
        T NSSATKE   QESRS+ +LVS+IS N+GEK  EI  + KPNQI      SSPNSKSPNN   D   S QISQ+K QSFSAE KERE E+Y+DKLAA  
Subjt:  TKNSSATKEMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQI-----RSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPI

Query:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM
         GA+PAA      MK+KGIHE  T++ DA+K+  IRGNV+  F RRN MKAIM
Subjt:  TGASPAAKSEAGAMKLKGIHESTTEIHDALKR--IRGNVESSFGRRNHMKAIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37300.1 unknown protein2.8e-1547.2Show/hide
Query:  EKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEISTKNSSATKEM
        E++ E  EG +T+ECLRGRLLAERQ SRSAKEE EL+ +K+ ELE  +++E  LR KAEKRL+LL+KKLE +     S +SE S+SSE+S  +S  T   
Subjt:  EKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEISTKNSSATKEM

Query:  IDQESRSDKNLVSSISENQGEKAPE
         ++E  +  +   ++ E + + A E
Subjt:  IDQESRSDKNLVSSISENQGEKAPE

AT2G37300.2 unknown protein2.8e-1547.2Show/hide
Query:  EKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEISTKNSSATKEM
        E++ E  EG +T+ECLRGRLLAERQ SRSAKEE EL+ +K+ ELE  +++E  LR KAEKRL+LL+KKLE +     S +SE S+SSE+S  +S  T   
Subjt:  EKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEISTKNSSATKEM

Query:  IDQESRSDKNLVSSISENQGEKAPE
         ++E  +  +   ++ E + + A E
Subjt:  IDQESRSDKNLVSSISENQGEKAPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCTACTTACAAAGAAAACAAACAATGGAGTGAAAAGAAAATGGAGATTGGGGAGGGTTTGAAAACATTAGAATGTTTAAGAGGAAGATTACTTGCTGAGAGACA
AGCTTCAAGATCAGCCAAAGAAGAAGAAGAACTTATGGGAAAAAAGCTGATAGAGTTGGAGAACAGGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCTGAGAAAAGGC
TTCAACTCTTGATAAAGAAGCTTGAATCCCTAAACATTCCCTCAACATCAGCAACCTCCGAAAATTCAAATTCATCAGAAATTTCAACAAAAAATTCATCAGCCACAAAG
GAAATGATAGATCAAGAATCAAGATCAGACAAGAATCTCGTTTCATCAATTTCGGAAAATCAAGGAGAGAAAGCTCCAGAAATCACCACAGAGAAAAAACCTAATCAGAT
CCGTTCAAGCCCTAACTCCAAATCTCCCAACAATTTCTACATCGATCTTCGCGGATCCTCTCAAATCTCTCAAATAAAAGATCAAAGTTTTTCAGCAGAAGTAAAGGAGA
GGGAGAAGGAGAATTACATGGATAAATTGGCAGCACCGATCACCGGAGCGTCACCGGCGGCGAAGTCAGAGGCCGGAGCGATGAAGTTGAAGGGAATCCATGAGAGTACA
ACAGAAATCCATGATGCTCTGAAACGTATCAGAGGAAATGTTGAGAGCTCATTTGGGAGGAGAAATCACATGAAGGCCATAATGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCTACTTACAAAGAAAACAAACAATGGAGTGAAAAGAAAATGGAGATTGGGGAGGGTTTGAAAACATTAGAATGTTTAAGAGGAAGATTACTTGCTGAGAGACA
AGCTTCAAGATCAGCCAAAGAAGAAGAAGAACTTATGGGAAAAAAGCTGATAGAGTTGGAGAACAGGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCTGAGAAAAGGC
TTCAACTCTTGATAAAGAAGCTTGAATCCCTAAACATTCCCTCAACATCAGCAACCTCCGAAAATTCAAATTCATCAGAAATTTCAACAAAAAATTCATCAGCCACAAAG
GAAATGATAGATCAAGAATCAAGATCAGACAAGAATCTCGTTTCATCAATTTCGGAAAATCAAGGAGAGAAAGCTCCAGAAATCACCACAGAGAAAAAACCTAATCAGAT
CCGTTCAAGCCCTAACTCCAAATCTCCCAACAATTTCTACATCGATCTTCGCGGATCCTCTCAAATCTCTCAAATAAAAGATCAAAGTTTTTCAGCAGAAGTAAAGGAGA
GGGAGAAGGAGAATTACATGGATAAATTGGCAGCACCGATCACCGGAGCGTCACCGGCGGCGAAGTCAGAGGCCGGAGCGATGAAGTTGAAGGGAATCCATGAGAGTACA
ACAGAAATCCATGATGCTCTGAAACGTATCAGAGGAAATGTTGAGAGCTCATTTGGGAGGAGAAATCACATGAAGGCCATAATGAAATAA
Protein sequenceShow/hide protein sequence
MMSTYKENKQWSEKKMEIGEGLKTLECLRGRLLAERQASRSAKEEEELMGKKLIELENRIRKETELRNKAEKRLQLLIKKLESLNIPSTSATSENSNSSEISTKNSSATK
EMIDQESRSDKNLVSSISENQGEKAPEITTEKKPNQIRSSPNSKSPNNFYIDLRGSSQISQIKDQSFSAEVKEREKENYMDKLAAPITGASPAAKSEAGAMKLKGIHEST
TEIHDALKRIRGNVESSFGRRNHMKAIMK