; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025197 (gene) of Chayote v1 genome

Gene IDSed0025197
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG10:7562440..7566816
RNA-Seq ExpressionSed0025197
SyntenySed0025197
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]4.3e-0954.1Show/hide
Query:  DYPWCIGGDFNEALWSNEKKGGSLDDSGSMEHFRKMIGDMCLQDLGFFGDKFTWCNSFVGN
        D PW +GGDFNE L  NEK+GG       ME FR +I D  L+DLGF G K+TWCN   G+
Subjt:  DYPWCIGGDFNEALWSNEKKGGSLDDSGSMEHFRKMIGDMCLQDLGFFGDKFTWCNSFVGN

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]5.6e-0926.75Show/hide
Query:  SGSMEHFRKMIGDMCLQDLGFFGDKFTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKIN-LKS
        + ++E +R+++GD  +Q +             V +   I++ L  S+ +  F    +  W +W +RN ++         D   W++N+  EF+  N L  
Subjt:  SGSMEHFRKMIGDMCLQDLGFFGDKFTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKIN-LKS

Query:  VLVADHSPPAPLMSSKVWMPPRRGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIA
          V  H P         W  P+RG FK++ DA+ +    K G GVI+RD++G  I A
Subjt:  VLVADHSPPAPLMSSKVWMPPRRGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIA

XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]3.2e-1232.85Show/hide
Query:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSV---LVADHSPPAPLMSSKVWMPPRR
        F  C+ F  + QD L+ L  SLST DF+   V VW IWNDRN +  +  I     R+ W+  Y+++FQ  ++ S+    + + +          W PP  
Subjt:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSV---LVADHSPPAPLMSSKVWMPPRR

Query:  GAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAH
        G  K++VDA C+ +  + G G++ R+ +G  + AA+H
Subjt:  GAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAH

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]7.4e-0929.5Show/hide
Query:  GDKFTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLK----SVLVADHSPPAPLMSSKVWM
        G  F W  +   N  D L+ L+   S  + E    ++W IW +RN++I  +   + V  A +  NYL  +     K          + PPAP+  S  W 
Subjt:  GDKFTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLK----SVLVADHSPPAPLMSSKVWM

Query:  PPRRGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAA
        PP  G+ K++VDA    + +++G G ++R+ +G  +IAA
Subjt:  PPRRGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAA

XP_030498035.1 uncharacterized protein LOC115713693 [Cannabis sativa]7.9e-1132.37Show/hide
Query:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV----WMPPR
        F    + VG   D +  LA  LS Q+ E   V++WVIW DRNK+   E+    +  A +  NY++ + K N +   V +   PA + +       W PP 
Subjt:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV----WMPPR

Query:  RGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAHL
            KL+VDA   P    +G G IVR+++G  + A + L
Subjt:  RGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAHL

TrEMBL top hitse value%identityAlignment
A0A6J1CTE3 uncharacterized protein LOC1110145781.5e-1232.85Show/hide
Query:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSV---LVADHSPPAPLMSSKVWMPPRR
        F  C+ F  + QD L+ L  SLST DF+   V VW IWNDRN +  +  I     R+ W+  Y+++FQ  ++ S+    + + +          W PP  
Subjt:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSV---LVADHSPPAPLMSSKVWMPPRR

Query:  GAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAH
        G  K++VDA C+ +  + G G++ R+ +G  + AA+H
Subjt:  GAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAH

A0A803PE40 Uncharacterized protein3.8e-1132.37Show/hide
Query:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV----WMPPR
        F    + VG   D +  LA  LS Q+ E   V++WVIW DRNK+   E+    +  A +  NY++ + K N +   V +   PA + +       W PP 
Subjt:  FTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV----WMPPR

Query:  RGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAHL
            KL+VDA   P    +G G IVR+++G  + A + L
Subjt:  RGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAHL

A0A803PLQ2 Uncharacterized protein2.1e-0931.75Show/hide
Query:  DILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV-------WMPPRRGAFKLSVD
        D L+ L+  LS QDFE    ++W IW DRNK++             +   +L++F +    +   A  S   P  SS         W PP+   FK++VD
Subjt:  DILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV-------WMPPRRGAFKLSVD

Query:  ATCRPNCSKIGCGVIVRDHRGFGIIA
        A       K+G G ++RDH G  I A
Subjt:  ATCRPNCSKIGCGVIVRDHRGFGIIA

A0A803PQV1 Uncharacterized protein5.5e-1034.15Show/hide
Query:  DILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV----WMPPRRGAFKLSVDATC
        D +  LA  LS Q+ E   V++WVIW DRNK+   E+    +  A +  NY+  +QK       V++ + P   ++  +    W PP     KL+VDA  
Subjt:  DILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKV----WMPPRRGAFKLSVDATC

Query:  RPNCSKIGCGVIVRDHRGFGIIA
         P    +G G IVR+H G  I A
Subjt:  RPNCSKIGCGVIVRDHRGFGIIA

A0A803Q8J4 Uncharacterized protein1.2e-0932.8Show/hide
Query:  NAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKVWMPPRRGAFKLSVDATCR
        N +D L +++ + +  + E     +W IW+DRN +I  ++       +   +N+L  ++     S L A  SPPA    SK W PP     KL+VDA   
Subjt:  NAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADHSPPAPLMSSKVWMPPRRGAFKLSVDATCR

Query:  PNCSKIGCGVIVRDHRGFGIIAAAH
          C+KIG G I+RD  G    A +H
Subjt:  PNCSKIGCGVIVRDHRGFGIIAAAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCAATTGTTGGTGTATATGATGGAAAAGAGCATTATGAAGGAGGTAACACAGGGAGAAATGATTATGGAGGAAGAAGTAATAAGCCTCATTGGAGAATCAAAAA
TGCTAAAATAGATGGTAATGTTGAAAGGATTGAGATGGAGGACAATGCAAAACAGATAATGGATTTAAAAACTAACAGCAAGAGGGATTTGAACCCAGATATAGAAAAGG
AGGCAGAGAGTTCAGAAAATAATAGTGGAAAAACTCACATTGATTATAATGCAATGAACAACAGGAGATCTACTAAAATGATGGAGGAAGTTATGACTGCAAATATAGAC
CCAGAGACTTTAAAAATTGATGATGTTGAAGAGTTTGTTTGGCCAAAAGATTTAAATAGTACAGAAACTAGGGTGGTGAACTGTGTAAAAATTAGAAAATTTAAAGGATT
GAAGAGGGAAGAAAATCCTTCGGCAATGAAGATTGTAGAGTACAATGGAGAAAAAGCCCCACCTAGAGCCATGAAAACGATTTGTTGGAACGTCCGAGGGATTGATTCTA
TTAAAGCTCGATTGCAATTTGAGTTTGGGTTTGCGGTGGATAGCAAAGATTATCCGTGGTGTATTGGTGGAGACTTTAATGAAGCATTGTGGTCTAATGAAAAGAAAGGT
GGTTCATTAGATGATTCTGGTTCTATGGAACATTTTAGAAAGATGATTGGGGATATGTGTCTCCAAGATTTGGGCTTTTTTGGTGATAAATTTACCTGGTGTAACAGTTT
TGTTGGGAATGCTCAAGATATTTTAATTAGGCTTGCTGGATCTTTGTCTACTCAGGATTTCGAAAAAGCCTGCGTTGTTGTATGGGTTATTTGGAATGATAGAAATAAGT
TGATCAGAAAGGAGAATATTTTAACAGAAGTTGATAGAGCTTATTGGGTGGAAAATTACCTAAAAGAGTTTCAGAAAATTAATCTAAAAAGTGTTCTTGTTGCTGATCAT
TCCCCGCCAGCGCCATTGATGTCTTCGAAAGTTTGGATGCCGCCTAGAAGGGGTGCTTTTAAGCTGTCGGTGGATGCAACTTGTCGACCGAATTGCTCTAAAATAGGTTG
CGGCGTGATTGTTCGGGATCATCGCGGTTTTGGTATTATTGCTGCTGCTCATCTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCAATTGTTGGTGTATATGATGGAAAAGAGCATTATGAAGGAGGTAACACAGGGAGAAATGATTATGGAGGAAGAAGTAATAAGCCTCATTGGAGAATCAAAAA
TGCTAAAATAGATGGTAATGTTGAAAGGATTGAGATGGAGGACAATGCAAAACAGATAATGGATTTAAAAACTAACAGCAAGAGGGATTTGAACCCAGATATAGAAAAGG
AGGCAGAGAGTTCAGAAAATAATAGTGGAAAAACTCACATTGATTATAATGCAATGAACAACAGGAGATCTACTAAAATGATGGAGGAAGTTATGACTGCAAATATAGAC
CCAGAGACTTTAAAAATTGATGATGTTGAAGAGTTTGTTTGGCCAAAAGATTTAAATAGTACAGAAACTAGGGTGGTGAACTGTGTAAAAATTAGAAAATTTAAAGGATT
GAAGAGGGAAGAAAATCCTTCGGCAATGAAGATTGTAGAGTACAATGGAGAAAAAGCCCCACCTAGAGCCATGAAAACGATTTGTTGGAACGTCCGAGGGATTGATTCTA
TTAAAGCTCGATTGCAATTTGAGTTTGGGTTTGCGGTGGATAGCAAAGATTATCCGTGGTGTATTGGTGGAGACTTTAATGAAGCATTGTGGTCTAATGAAAAGAAAGGT
GGTTCATTAGATGATTCTGGTTCTATGGAACATTTTAGAAAGATGATTGGGGATATGTGTCTCCAAGATTTGGGCTTTTTTGGTGATAAATTTACCTGGTGTAACAGTTT
TGTTGGGAATGCTCAAGATATTTTAATTAGGCTTGCTGGATCTTTGTCTACTCAGGATTTCGAAAAAGCCTGCGTTGTTGTATGGGTTATTTGGAATGATAGAAATAAGT
TGATCAGAAAGGAGAATATTTTAACAGAAGTTGATAGAGCTTATTGGGTGGAAAATTACCTAAAAGAGTTTCAGAAAATTAATCTAAAAAGTGTTCTTGTTGCTGATCAT
TCCCCGCCAGCGCCATTGATGTCTTCGAAAGTTTGGATGCCGCCTAGAAGGGGTGCTTTTAAGCTGTCGGTGGATGCAACTTGTCGACCGAATTGCTCTAAAATAGGTTG
CGGCGTGATTGTTCGGGATCATCGCGGTTTTGGTATTATTGCTGCTGCTCATCTTTTTTAG
Protein sequenceShow/hide protein sequence
MGSIVGVYDGKEHYEGGNTGRNDYGGRSNKPHWRIKNAKIDGNVERIEMEDNAKQIMDLKTNSKRDLNPDIEKEAESSENNSGKTHIDYNAMNNRRSTKMMEEVMTANID
PETLKIDDVEEFVWPKDLNSTETRVVNCVKIRKFKGLKREENPSAMKIVEYNGEKAPPRAMKTICWNVRGIDSIKARLQFEFGFAVDSKDYPWCIGGDFNEALWSNEKKG
GSLDDSGSMEHFRKMIGDMCLQDLGFFGDKFTWCNSFVGNAQDILIRLAGSLSTQDFEKACVVVWVIWNDRNKLIRKENILTEVDRAYWVENYLKEFQKINLKSVLVADH
SPPAPLMSSKVWMPPRRGAFKLSVDATCRPNCSKIGCGVIVRDHRGFGIIAAAHLF