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Sed0025204 (gene) of Chayote v1 genome

Gene IDSed0025204
OrganismSechium edule (Chayote v1)
DescriptionL-threonine dehydratase
Genome locationLG10:11270073..11275244
RNA-Seq ExpressionSed0025204
SyntenySed0025204
Gene Ontology termsGO:0009097 - isoleucine biosynthetic process (biological process)
GO:0004794 - L-threonine ammonia-lyase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsIPR036052 - Tryptophan synthase beta subunit-like PLP-dependent enzyme


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604379.1 Threonine dehydratase biosynthetic, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.3e-0764Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
        M +  P+ K+KKGVIC+SA NHAQ VAL+ ++L   AHIVMPTTTPQIK+
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
KAG7034531.1 Threonine dehydratase biosynthetic, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]6.3e-0764Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
        M +  P+ K+KKGVIC+SA NHAQ VAL+ ++L   AHIVMPTTTPQIK+
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
RRT76439.1 hypothetical protein B296_00007390 [Ensete ventricosum]2.7e-1059.7Show/hide
Query:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
        ++ KGVICSSA NHAQ VAL+A+KLH  A IVMP TTP+IKVKI GVE +D N++A +L   + + L
Subjt:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
RWV88718.1 hypothetical protein GW17_00049172 [Ensete ventricosum]2.7e-1059.7Show/hide
Query:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
        ++ KGVICSSA NHAQ VAL+A+KLH  A IVMP TTP+IKVKI GVE +D N++A +L   + + L
Subjt:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
XP_023543122.1 threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita pepo subsp. pepo]2.8e-0750.67Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK----------VKIFGVESNDENSIAQ
        M +  P+ K+KKGVIC+SA NHAQ VAL+ ++L   AHIVMPTTTPQIK          V +FG + N+    AQ
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK----------VKIFGVESNDENSIAQ
TrEMBL top hitse value%identityAlignment
A0A2U0Z0Z8 L-threonine dehydratase6.8e-0770Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
        M   TPQ ++KKGVIC+SA NHAQ VA+SA+KL A A IVMPTTTPQ+KV
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
A0A427AJK6 Threonine ammonia-lyase1.3e-1059.7Show/hide
Query:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
        ++ KGVICSSA NHAQ VAL+A+KLH  A IVMP TTP+IKVKI GVE +D N++A +L   + + L
Subjt:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
A0A444CS94 Threonine ammonia-lyase1.3e-1059.7Show/hide
Query:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
        ++ KGVICSSA NHAQ VAL+A+KLH  A IVMP TTP+IKVKI GVE +D N++A +L   + + L
Subjt:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNL
A0A6J1EGE8 Threonine dehydratase4.0e-0749.33Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK----------VKIFGVESNDENSIAQ
        M +  P+ K+KKGVIC+SA NHAQ VAL+ ++L   AHIVMP TTPQIK          V++FG + N+    AQ
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK----------VKIFGVESNDENSIAQ
A0A6J1IJC6 Threonine dehydratase8.9e-0748Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV----KIFGVESNDENSIAQALVRDK
        M +  P+ ++KKG+IC+SA NHAQ VALS ++L   A+IVMPTTTPQIK+    ++ G+     NS  +A  R K
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV----KIFGVESNDENSIAQALVRDK
SwissProt top hitse value%identityAlignment
A0FKE6 Threonine dehydratase 1 biosynthetic, chloroplastic2.9e-0760.78Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVK
        M    P+ +++KGVICSSA NHAQ VALSA++L   A IVMP TTP IK K
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVK
P25306 Threonine dehydratase 2 biosynthetic, chloroplastic3.3e-0661.9Show/hide
Query:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
        ++ KGVI +SA NHAQ VAL+ ++L+  A IVMPTTTPQIK+
Subjt:  KVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKV
Q5HMF5 L-threonine dehydratase biosynthetic IlvA2.8e-0557.69Show/hide
Query:  KGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK---VKIFGVESNDE
        KG+ C+SA NHAQ VA +AKKL+  A I MP TTP+ K   VK FG +SN E
Subjt:  KGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK---VKIFGVESNDE
Q9AXU4 Threonine dehydratase1.6e-0550.98Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVK
        M T   + ++++GVI +SA NHAQ VAL A++L   A IVMP TTP+IK++
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVK
Q9ZSS6 Threonine dehydratase biosynthetic, chloroplastic2.9e-0763.27Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK
        M    P  ++ KGVICSSA NHAQ VALSA KL   A IVMP TTP+IK
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK
Arabidopsis top hitse value%identityAlignment
AT3G10050.1 L-O-methylthreonine resistant 12.1e-0863.27Show/hide
Query:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK
        M    P  ++ KGVICSSA NHAQ VALSA KL   A IVMP TTP+IK
Subjt:  MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACAACTACACCCCAAATTAAGGTGAAAAAAGGGGTTATCTGTTCATCAGCTGAAAATCATGCCCAAAGGGTTGCATTATCTGCTAAGAAATTACATGCTGCTGC
CCACATTGTTATGCCAACAACTACACCCCAAATTAAGGTGAAGATATTTGGAGTTGAATCAAATGACGAAAACTCCATAGCTCAAGCCTTGGTTCGCGATAAGATAGTGA
ATCTGTTCAACAAGTTGGTGAAGAGACTTTTCGAATTTGTCGAGAAGTCCTCAATGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACAACTACACCCCAAATTAAGGTGAAAAAAGGGGTTATCTGTTCATCAGCTGAAAATCATGCCCAAAGGGTTGCATTATCTGCTAAGAAATTACATGCTGCTGC
CCACATTGTTATGCCAACAACTACACCCCAAATTAAGGTGAAGATATTTGGAGTTGAATCAAATGACGAAAACTCCATAGCTCAAGCCTTGGTTCGCGATAAGATAGTGA
ATCTGTTCAACAAGTTGGTGAAGAGACTTTTCGAATTTGTCGAGAAGTCCTCAATGATGTAA
Protein sequenceShow/hide protein sequence
MPTTTPQIKVKKGVICSSAENHAQRVALSAKKLHAAAHIVMPTTTPQIKVKIFGVESNDENSIAQALVRDKIVNLFNKLVKRLFEFVEKSSMM