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Sed0025211 (gene) of Chayote v1 genome

Gene IDSed0025211
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationLG01:65675082..65680500
RNA-Seq ExpressionSed0025211
SyntenySed0025211
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143640.2 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus]1.0e-8998.1Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIG FWR LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_008467243.1 PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis melo]1.1e-8897.47Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIG FWR LKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022159660.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Momordica charantia]7.2e-8894.3Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRG+LKSIKDKGIGNFWR LKEEGYLKCL DGNLLQTKIHNIGATLVG+DKFGNKYYQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+E IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022958111.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]2.5e-8896.2Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGI+KSIKDKGIG FWR LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_038875755.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincasa hispida]1.3e-8998.1Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIG FWR LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

TrEMBL top hitse value%identityAlignment
A0A0A0KNC9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.9e-9098.1Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIG FWR LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A1S3CUD4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 125.4e-8997.47Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIG FWR LKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A5A7ULJ6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 125.4e-8997.47Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGILKSIKDKGIG FWR LKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1DZD3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.5e-8894.3Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRG+LKSIKDKGIGNFWR LKEEGYLKCL DGNLLQTKIHNIGATLVG+DKFGNKYYQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+E IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1H155 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.2e-8896.2Show/hide
Query:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MASVVRGI+KSIKDKGIG FWR LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

SwissProt top hitse value%identityAlignment
Q0MQ85 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-1141.49Show/hide
Query:  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH ITD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q0MQ86 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.6e-1140.43Show/hide
Query:  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +TD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.1e-1344.87Show/hide
Query:  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSG
        TLVGVDK GN+YY+  + +  YGRHRWVEY +    + + +PPE+H W+HH++D    E+L   P+ Y   H  N +G
Subjt:  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSG

Q9M9M9 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.3e-7175.64Show/hide
Query:  SVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ++  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  SVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

Q9N2W7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.4e-1439.04Show/hide
Query:  IGNFWRGLKEEGYLKCLPDGNLLQ--TKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLK
        I  F + +KE G +K +     L   T++     TLVG D FGN+YY+  +      R+RWVE+ +K    Y+A+QVPPEWH WLHHIT    D+   +K
Subjt:  IGNFWRGLKEEGYLKCLPDGNLLQ--TKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLK

Query:  P---SRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQP
        P     + +EHKEN S      IY  K +   P     T+ Q WQP
Subjt:  P---SRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQP

Arabidopsis top hitse value%identityAlignment
AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit9.2e-7375.64Show/hide
Query:  SVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ++  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  SVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

AT3G03100.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit4.5e-7275Show/hide
Query:  SVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ++  +TQYG HRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  SVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAGTGGTGCGGGGGATTCTGAAGTCAATCAAAGACAAAGGGATCGGCAATTTCTGGCGAGGGCTCAAGGAAGAAGGCTACCTGAAATGCCTACCCGATGGGAA
TCTATTGCAAACCAAAATCCACAACATTGGTGCGACGCTTGTGGGTGTTGATAAGTTTGGCAATAAATATTACCAGAGGGTTGATGAAGAGACGCAATATGGAAGACACA
GGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCAGAATGGCATGGTTGGCTCCACCACATAACTGATCACACAGGAGATGAGCTTCTGATG
CTGAAACCCAGTAGGTATGGAATAGAACATAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATCTACCATTCCAAAGGACATGCTCTTAATCCCGGTCAGAGAGATTG
GACTCGATATCAGTCGTGGCAACCAACCAAGTCCTAA
mRNA sequenceShow/hide mRNA sequence
GTTTTACCCAAAAGTTCCGAAGTAGGCCGGATCATTCCACGCTCATCTTCATTCGATTCGTGAGCTGAATCGGAAACGCAAGAACAGCGCGGAAGAAAAATGGCGTCAGT
GGTGCGGGGGATTCTGAAGTCAATCAAAGACAAAGGGATCGGCAATTTCTGGCGAGGGCTCAAGGAAGAAGGCTACCTGAAATGCCTACCCGATGGGAATCTATTGCAAA
CCAAAATCCACAACATTGGTGCGACGCTTGTGGGTGTTGATAAGTTTGGCAATAAATATTACCAGAGGGTTGATGAAGAGACGCAATATGGAAGACACAGGTGGGTTGAA
TATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCAGAATGGCATGGTTGGCTCCACCACATAACTGATCACACAGGAGATGAGCTTCTGATGCTGAAACCCAG
TAGGTATGGAATAGAACATAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATCTACCATTCCAAAGGACATGCTCTTAATCCCGGTCAGAGAGATTGGACTCGATATC
AGTCGTGGCAACCAACCAAGTCCTAAGTAATTTATTTATCAACCCCTTTGGTTTGTTGCTTCTGAATAAGTGACTTGTTTTCTATGCAAGCTGTGAATTATTTTCATCAT
GCTTTGCTACACAACAGCACGTATGACAGATTTTCAGCATGTTTCTGGTTTTCTAAATTCCAACAAATTCATTGTTGTTCCATTTCTTGCCTGGCTCTGTTCTTTTGTGC
AATGTTTTAGCAACCACTGAGATATAGAATGTTGTCATGATAGTGGATCAGATTCGTAATTTGATCTCTACAATTTGAGACCATCATTGTTTTTTAATAAACATTTTATG
GTTTGCTATGA
Protein sequenceShow/hide protein sequence
MASVVRGILKSIKDKGIGNFWRGLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLM
LKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS