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Sed0025226 (gene) of Chayote v1 genome

Gene IDSed0025226
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:1015693..1016158
RNA-Seq ExpressionSed0025226
SyntenySed0025226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061609.1 uncharacterized protein E6C27_scaffold41G001740 [Cucumis melo var. makuwa]9.4e-1860.18Show/hide
Query:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISSVHFAEDLIKSNEEL--QKGLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGI
        SSSILSS     +MAMAFAALS    ++ LS ++HKSHPSISS  F+     S EEL  +K +IL SS    R     LT  GGGGGGMPANR ALYNGI
Subjt:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISSVHFAEDLIKSNEEL--QKGLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGI

Query:  LRDRLVQRMAYSL
        LRDRLV R+AYSL
Subjt:  LRDRLVQRMAYSL

KGN60682.1 hypothetical protein Csa_019276 [Cucumis sativus]4.2e-1852.31Show/hide
Query:  MSSSILSSHGMDMAMAMAFAALSGTLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSGG
        MSSSILSS     +MAMAFA     ++ LSF++HKSHPSISS                VHF++DL    S ++L  +K ++L SS P+ R P   LT+ G
Subjt:  MSSSILSSHGMDMAMAMAFAALSGTLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSGG

Query:  GGGGGMPANRVALYNGILRDRLVQRMAYSL
        GGGGG+PANR ALYNGILR+RLV R+AYSL
Subjt:  GGGGGMPANRVALYNGILRDRLVQRMAYSL

XP_008457539.1 PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo]3.2e-1854.96Show/hide
Query:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSG
        SSSILSS     +MAMAFAALS    ++ LS ++HKSHPSISS                VHF++DL    S EEL  +K +IL SS    R     LT  
Subjt:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSG

Query:  GGGGGGMPANRVALYNGILRDRLVQRMAYSL
        GGGGGGMPANR ALYNGILRDRLV R+AYSL
Subjt:  GGGGGGMPANRVALYNGILRDRLVQRMAYSL

XP_022946911.1 uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]3.2e-1861.26Show/hide
Query:  MAMAFAALSGTL-IFLSFFIHKSHPSISS-----------VHFAED-LIKSNEELQK--GLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGILR
        MAMA AALSG + + LSF   KS  S+SS           VHFA+D  + S EELQ+  GLIL  S P  R PP  LTS GGGG GMPANRVALYNGILR
Subjt:  MAMAFAALSGTL-IFLSFFIHKSHPSISS-----------VHFAED-LIKSNEELQK--GLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGILR

Query:  DRLVQRMAYSL
        DRLV RMAYSL
Subjt:  DRLVQRMAYSL

XP_038890799.1 uncharacterized protein LOC120080255 [Benincasa hispida]2.6e-2363.85Show/hide
Query:  MSSSILSSHGMDMAMAMAFAALSGT-LIFLSFFIHKSHPSISS----------------VHFAEDL-IKSNEELQ--KGLILSSSSPATRTPPSCLTSGG
        MSSSILSS     +MAMAFAALSGT ++ LSF +HKS PSISS                VHFA+DL I   EELQ  KGLIL SS P  R P   LTS G
Subjt:  MSSSILSSHGMDMAMAMAFAALSGT-LIFLSFFIHKSHPSISS----------------VHFAEDL-IKSNEELQ--KGLILSSSSPATRTPPSCLTSGG

Query:  GGGGGMPANRVALYNGILRDRLVQRMAYSL
        GGGGGMPANRVALYNGILRDRLV R+AYSL
Subjt:  GGGGGMPANRVALYNGILRDRLVQRMAYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LIY8 Uncharacterized protein2.0e-1852.31Show/hide
Query:  MSSSILSSHGMDMAMAMAFAALSGTLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSGG
        MSSSILSS     +MAMAFA     ++ LSF++HKSHPSISS                VHF++DL    S ++L  +K ++L SS P+ R P   LT+ G
Subjt:  MSSSILSSHGMDMAMAMAFAALSGTLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSGG

Query:  GGGGGMPANRVALYNGILRDRLVQRMAYSL
        GGGGG+PANR ALYNGILR+RLV R+AYSL
Subjt:  GGGGGMPANRVALYNGILRDRLVQRMAYSL

A0A1S3C5Q6 uncharacterized protein LOC1034972021.6e-1854.96Show/hide
Query:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSG
        SSSILSS     +MAMAFAALS    ++ LS ++HKSHPSISS                VHF++DL    S EEL  +K +IL SS    R     LT  
Subjt:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISS----------------VHFAEDL--IKSNEEL--QKGLILSSSSPATRTPPSCLTSG

Query:  GGGGGGMPANRVALYNGILRDRLVQRMAYSL
        GGGGGGMPANR ALYNGILRDRLV R+AYSL
Subjt:  GGGGGGMPANRVALYNGILRDRLVQRMAYSL

A0A5A7V7G5 Uncharacterized protein4.5e-1860.18Show/hide
Query:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISSVHFAEDLIKSNEEL--QKGLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGI
        SSSILSS     +MAMAFAALS    ++ LS ++HKSHPSISS  F+     S EEL  +K +IL SS    R     LT  GGGGGGMPANR ALYNGI
Subjt:  SSSILSSHGMDMAMAMAFAALSG--TLIFLSFFIHKSHPSISSVHFAEDLIKSNEEL--QKGLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGI

Query:  LRDRLVQRMAYSL
        LRDRLV R+AYSL
Subjt:  LRDRLVQRMAYSL

A0A6J1G4X1 uncharacterized protein LOC111450851 isoform X21.6e-1861.26Show/hide
Query:  MAMAFAALSGTL-IFLSFFIHKSHPSISS-----------VHFAED-LIKSNEELQK--GLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGILR
        MAMA AALSG + + LSF   KS  S+SS           VHFA+D  + S EELQ+  GLIL  S P  R PP  LTS GGGG GMPANRVALYNGILR
Subjt:  MAMAFAALSGTL-IFLSFFIHKSHPSISS-----------VHFAED-LIKSNEELQK--GLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGILR

Query:  DRLVQRMAYSL
        DRLV RMAYSL
Subjt:  DRLVQRMAYSL

A0A6J1G5C3 uncharacterized protein LOC111450851 isoform X11.3e-1757.14Show/hide
Query:  MAMAFAALSGTL-IFLSFFIHKSHPSISS-------------------VHFAED-LIKSNEELQK--GLILSSSSPATRTPPSCLTSGGGGGGGMPANRV
        MAMA AALSG + + LSF   KS  S+SS                   VHFA+D  + S EELQ+  GLIL  S P  R PP  LTS GGGG GMPANRV
Subjt:  MAMAFAALSGTL-IFLSFFIHKSHPSISS-------------------VHFAED-LIKSNEELQK--GLILSSSSPATRTPPSCLTSGGGGGGGMPANRV

Query:  ALYNGILRDRLVQRMAYSL
        ALYNGILRDRLV RMAYSL
Subjt:  ALYNGILRDRLVQRMAYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCTTCCATTTTGAGCTCCCATGGTATGGATATGGCTATGGCTATGGCTTTTGCAGCTCTTTCAGGCACTCTCATCTTCCTCTCCTTTTTCATCCATAAATCCCA
TCCCTCAATTTCTTCTGTTCACTTTGCAGAGGATTTGATCAAAAGTAATGAAGAGTTGCAAAAAGGCTTGATTTTGAGTTCATCGTCGCCGGCGACAAGAACTCCGCCGT
CGTGTCTGACGAGCGGCGGCGGAGGCGGCGGCGGGATGCCGGCCAATCGGGTGGCGCTGTATAATGGAATCTTGAGGGATCGTTTGGTTCAAAGGATGGCATATTCTCTT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCTTCCATTTTGAGCTCCCATGGTATGGATATGGCTATGGCTATGGCTTTTGCAGCTCTTTCAGGCACTCTCATCTTCCTCTCCTTTTTCATCCATAAATCCCA
TCCCTCAATTTCTTCTGTTCACTTTGCAGAGGATTTGATCAAAAGTAATGAAGAGTTGCAAAAAGGCTTGATTTTGAGTTCATCGTCGCCGGCGACAAGAACTCCGCCGT
CGTGTCTGACGAGCGGCGGCGGAGGCGGCGGCGGGATGCCGGCCAATCGGGTGGCGCTGTATAATGGAATCTTGAGGGATCGTTTGGTTCAAAGGATGGCATATTCTCTT
TGA
Protein sequenceShow/hide protein sequence
MSSSILSSHGMDMAMAMAFAALSGTLIFLSFFIHKSHPSISSVHFAEDLIKSNEELQKGLILSSSSPATRTPPSCLTSGGGGGGGMPANRVALYNGILRDRLVQRMAYSL