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Sed0025236 (gene) of Chayote v1 genome

Gene IDSed0025236
OrganismSechium edule (Chayote v1)
Descriptionsodium/potassium/calcium exchanger 1-like
Genome locationLG04:46055958..46056751
RNA-Seq ExpressionSed0025236
SyntenySed0025236
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589100.1 hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia]7.2e-4370.81Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVENGLIEKEEE
        MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S D  S G  RG EA  A+M  GS +IESKVE    ++EE 
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVENGLIEKEEE

Query:  IERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
           LI +DEE ER    D+D +++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Subjt:  IERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

KAG7022808.1 hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4469.46Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL
        MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S D  S G  RG EA  A+M  GS +IESKVE      NGL
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL

Query:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
        I+K+EE ER I+ED           D++++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Subjt:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

XP_022928452.1 uncharacterized protein LOC111435260 [Cucurbita moschata]7.7e-4570.06Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL
        MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S D  S G  RG EA  A+M  GS +IESKVE      NGL
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL

Query:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
        I+K+EE ER I+ED+        D D++++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Subjt:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

XP_023530308.1 uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]2.9e-4469.46Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL
        MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S D  S G  RG EA  AAM  GS +IESKVE      NGL
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL

Query:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
        I+K+EE ER I+ED           D+++++EEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Subjt:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

XP_038888415.1 histone H3.v1-like [Benincasa hispida]6.8e-4977.38Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKV------ENGL
        MKLVISA+LLSAMVFYSSLLPFLHSLNLYIS TIHKNYMFLLCNG+LVF+VRNSGLIGNS DE    SGR +EA GAAM  G+R+IESKV      ENGL
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKV------ENGL

Query:  IEKEEEIERLIIEDE-EEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
        I KEEE E LI +DE EEERFNFY+E+EEEEEEE+     EELNKKCEEFIRKMK GIKFESQQV VL
Subjt:  IEKEEEIERLIIEDE-EEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein1.0e-4269.82Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAA-MGAGSREIESKVE------NG
        MKLVISA+LLSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNG+LVF+VRNSGLIGN+ DE S     G+EA GAA M  G+R+IESKVE      NG
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAA-MGAGSREIESKVE------NG

Query:  LIEKEEEIERLIIEDE-EEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
        L+  E++IE LI ++E EEERF  Y+E+EEEE +       EELNKKCEEFIRKMKAGIKFESQQ+ +L
Subjt:  LIEKEEEIERLIIEDE-EEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

A0A1S3CG16 gem-associated protein 2-like1.1e-3664.2Show/hide
Query:  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE--------NGLIEKEEEIERL
        MVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNG+LVF+VRNSGLIGN+ +E    S R +      M  G+R+IESKVE        NGL+  EE+ E L
Subjt:  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE--------NGLIEKEEEIERL

Query:  IIEDE-EEERFNFYDEDEEEEEEEVGALS----TEELNKKCEEFIRKMKAGIKFESQQVLVL
        I ++E EEERF  Y+E+EEEEEEE          EELNKKCEEFIRKMKAGIKFESQQ+ +L
Subjt:  IIEDE-EEERFNFYDEDEEEEEEEVGALS----TEELNKKCEEFIRKMKAGIKFESQQVLVL

A0A6J1C4P4 ATP-dependent RNA helicase MAK54.9e-3766.27Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKV------ENGL
        MK++ISA+LLSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNG+LVF+VRNSGLIG        GSG   E QG     G  ++ESKV      ENGL
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKV------ENGL

Query:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLV
        + ++EE E+LI EDEE        E+EEEEEEE G LS EELN+KCEEFIRKMKA IKFE QQVLV
Subjt:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLV

A0A6J1EJY9 uncharacterized protein LOC1114352603.7e-4570.06Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL
        MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S D  S G  RG EA  A+M  GS +IESKVE      NGL
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGL

Query:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
        I+K+EE ER I+ED+        D D++++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Subjt:  IEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like1.6e-4066.27Show/hide
Query:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSG-RGDEAQGAAMGAGSREIESKVENG------
        MKLVISA++LSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNG+LVF+VRNSGLI +S  E   G G R  EA GAAM   +  IE KVE+G      
Subjt:  MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSG-RGDEAQGAAMGAGSREIESKVENG------

Query:  -LIEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL
         + E+E+E ERL+ E+E+++      E+E+ E EEVGALS EEL+KK EEFIRKMKAGIK ESQQVL+L
Subjt:  -LIEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04495.1 unknown protein6.8e-0732.8Show/hide
Query:  KLVISATLLSAMVFYSSLLPF----LHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGS------REIESKVE
        K++  A++ S ++ YSSL+      LH L++Y S  + K YMFLLCNGI+ F++   G    + +  S+G       Q   +G         +++ + +E
Subjt:  KLVISATLLSAMVFYSSLLPF----LHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGS------REIESKVE

Query:  NGLIEKEEEIE----RLI----IEDEEEERFNFYDE------------DEEEEEEEV--GALSTEELNKKCEEFIRKMKAGIKFESQQV
           + KEEE E    R++    IE+EE       DE            D+  ++EE+    LS E+LNKKCE+FIRKMKA I+F  + +
Subjt:  NGLIEKEEEIE----RLI----IEDEEEERFNFYDE------------DEEEEEEEV--GALSTEELNKKCEEFIRKMKAGIKFESQQV

AT2G04515.1 unknown protein4.0e-0731.69Show/hide
Query:  KLVISATLLSAMVFYSSLLPF----LHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGS------REIESKVE
        K++  A++ S ++ YSSL+      LH L +Y S  + K YMFLLCNGI+ F++   G    + D  S G       Q   +G          ++ + +E
Subjt:  KLVISATLLSAMVFYSSLLPF----LHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGS------REIESKVE

Query:  NGLIEKEEEIERLIIEDEEEERFNFYDEDE----------------EEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQV
           + KEEE   ++  +EEEE      EDE                +++      LS+E+LNKKCE+FIRKMKA I++  + +
Subjt:  NGLIEKEEEIERLIIEDEEEERFNFYDEDE----------------EEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQV

AT3G13130.1 unknown protein4.9e-0531.72Show/hide
Query:  TLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSR------DEPSRGSGRGDEAQGAAMGAGSREIESKVENGL-------
        +LL++  FY  L  F+  L   ++  + KNYMFLLCNG++V V + SGL+ +S+          +    GD      +     E+E K ++G+       
Subjt:  TLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSR------DEPSRGSGRGDEAQGAAMGAGSREIESKVENGL-------

Query:  --IEKEEEIERLIIEDEEEERFN---FYDED------------EEEEEEEVGALST--EELNKKCEEFIRKMKAGIKFESQQVLVL
          +  EE+ +    ED EEE  +     D D             EEEE  VG +++  EE+NKK +EFIRKMK  ++ E+++ L+L
Subjt:  --IEKEEEIERLIIEDEEEERFN---FYDED------------EEEEEEEVGALST--EELNKKCEEFIRKMKAGIKFESQQVLVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTGTGATCTCAGCTACTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTCCTCCCATTCCTCCACTCATTGAACCTTTATATCTCTGCAACAATCCACAAGAA
CTATATGTTCTTGCTCTGCAATGGCATCCTCGTCTTCGTTGTTCGAAATTCCGGTCTCATCGGCAACTCCCGCGACGAACCGAGCCGGGGAAGTGGCAGGGGAGATGAAG
CTCAAGGGGCTGCAATGGGGGCTGGCAGCAGAGAAATTGAAAGCAAAGTTGAAAATGGGTTGATTGAAAAAGAAGAAGAAATTGAAAGATTGATTATAGAGGATGAAGAA
GAAGAGAGATTTAATTTTTATGATGAAGATGAAGAAGAAGAAGAAGAAGAAGTTGGGGCATTGAGCACAGAGGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAAT
GAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
CAAGATCCTTCAAAAAAGTCCCAACATTTTTCAAAAAAAAAAAAAAAAAAGTTTCAATTTTTGTGAAAAATTTGAAGAACCCAATTGACCCAATTGGCCAAAATCATCAA
ATCTTCAATCAAATTCTTCAAATATTTTAGCAAATTTCCACAATGAAGCTTGTGATCTCAGCTACTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTCCTCCCATTCCT
CCACTCATTGAACCTTTATATCTCTGCAACAATCCACAAGAACTATATGTTCTTGCTCTGCAATGGCATCCTCGTCTTCGTTGTTCGAAATTCCGGTCTCATCGGCAACT
CCCGCGACGAACCGAGCCGGGGAAGTGGCAGGGGAGATGAAGCTCAAGGGGCTGCAATGGGGGCTGGCAGCAGAGAAATTGAAAGCAAAGTTGAAAATGGGTTGATTGAA
AAAGAAGAAGAAATTGAAAGATTGATTATAGAGGATGAAGAAGAAGAGAGATTTAATTTTTATGATGAAGATGAAGAAGAAGAAGAAGAAGAAGTTGGGGCATTGAGCAC
AGAGGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGTAATTTGTAACTAAGAATTTATTGA
ACAAAATTTATGACTTGTAATTTTTAGTCTCTATTGGGTATAGAAATAATTTTATCTTTTAAATTTTGGTGGGAGGTGTTGTTTTCATATTGGCAAGATTTTCATGAATT
CTCATGATATTAATTAATATAAAC
Protein sequenceShow/hide protein sequence
MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVENGLIEKEEEIERLIIEDEE
EERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL