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Sed0025240 (gene) of Chayote v1 genome

Gene IDSed0025240
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:5428815..5430085
RNA-Seq ExpressionSed0025240
SyntenySed0025240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577122.1 hypothetical protein SDJN03_24696, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1052.75Show/hide
Query:  MASMLLNIIKTFMLIFLIFTCP-NSGGAHGLSRKEGNFKEPNPCYQRIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRASINP
        M+SM LN   TF+LIF++F     SGGAHG                     +V RK+L  EA+LMDYNEPSANP HEPR+GSPGGRAS NP
Subjt:  MASMLLNIIKTFMLIFLIFTCP-NSGGAHGLSRKEGNFKEPNPCYQRIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRASINP
KAG6577123.1 hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1157.47Show/hide
Query:  MASMLLNIIKTFMLIFLIFTCPNSGGAHGLSRKEGNFKEPNPCYQ-RIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
        MASM      TF  IFL+FT PNSG A GL+ KEG  K PNPC Q R+ K KV RK+L  E    DY  P  N  HEPR GSPGGRA
Subjt:  MASMLLNIIKTFMLIFLIFTCPNSGGAHGLSRKEGNFKEPNPCYQ-RIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
KAG6600409.1 hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1460.47Show/hide
Query:  MASMLLNIIKTFMLIFLIFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
        MASM     KTF+ IFL+F CPNSG A GL  KEG  K PNPC Q I++ K VRK+L  E  L+DY  PS NP HEPR G+PGGRA
Subjt:  MASMLLNIIKTFMLIFLIFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
KAG6600410.1 hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1661.11Show/hide
Query:  MASMLLNIIKTFMLIFLIFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRASINP
        MASML       +  FLIFT P+SG AHG S +    ++PNP  QRI    V+RKVL M+A LMDY+EP ANPSHEPRRGSPGGRAS NP
Subjt:  MASMLLNIIKTFMLIFLIFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRASINP
KGN53437.1 hypothetical protein Csa_015314 [Cucumis sativus]7.7e-1058.02Show/hide
Query:  IKTFMLIFL-IFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVK--GKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
        IKTF+ IFL IF  PNSG AH LS K+G  K  NPC Q IV+   KV RK+L  EA   DY  P  N  HEPR G+PGGRA
Subjt:  IKTFMLIFL-IFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVK--GKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
TrEMBL top hitse value%identityAlignment
A0A0A0KYH7 Uncharacterized protein3.7e-1058.02Show/hide
Query:  IKTFMLIFL-IFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVK--GKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
        IKTF+ IFL IF  PNSG AH LS K+G  K  NPC Q IV+   KV RK+L  EA   DY  P  N  HEPR G+PGGRA
Subjt:  IKTFMLIFL-IFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVK--GKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
A0A5A7TNM7 Uncharacterized protein1.9e-0965Show/hide
Query:  LSRKEG-NFKEPNPCYQRIV--KGKVVRKVL-EMEAMLMDYNEPSANPSHEPRRGSPGGR
        +S KEG N +  NPC Q  +  KGKV+RK+L   E +LMDYNEPSANPSHEPRRG+PGGR
Subjt:  LSRKEG-NFKEPNPCYQRIV--KGKVVRKVL-EMEAMLMDYNEPSANPSHEPRRGSPGGR
A0A5D3D203 Uncharacterized protein1.4e-0956.79Show/hide
Query:  IKTFMLIFL-IFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVK--GKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
        IKTF+ IFL IFT P+SG A  LS K+G  K  NPC Q IV+   +V RK+L  E +L+DY  P  N  HEPR GSPGGRA
Subjt:  IKTFMLIFL-IFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVK--GKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATGCTTCTTAACATAATTAAAACCTTCATGCTCATCTTCCTCATCTTCACTTGCCCTAATTCAGGAGGAGCCCATGGCCTGAGCAGAAAAGAGGGTAATTT
CAAGGAACCAAATCCTTGTTATCAGAGAATTGTGAAAGGAAAAGTGGTGAGAAAGGTTTTGGAAATGGAAGCAATGTTGATGGATTATAATGAACCAAGTGCAAACCCTA
GTCATGAGCCAAGAAGAGGCAGCCCTGGAGGTCGAGCAAGCATCAATCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATGCTTCTTAACATAATTAAAACCTTCATGCTCATCTTCCTCATCTTCACTTGCCCTAATTCAGGAGGAGCCCATGGCCTGAGCAGAAAAGAGGGTAATTT
CAAGGAACCAAATCCTTGTTATCAGAGAATTGTGAAAGGAAAAGTGGTGAGAAAGGTTTTGGAAATGGAAGCAATGTTGATGGATTATAATGAACCAAGTGCAAACCCTA
GTCATGAGCCAAGAAGAGGCAGCCCTGGAGGTCGAGCAAGCATCAATCCCTGA
Protein sequenceShow/hide protein sequence
MASMLLNIIKTFMLIFLIFTCPNSGGAHGLSRKEGNFKEPNPCYQRIVKGKVVRKVLEMEAMLMDYNEPSANPSHEPRRGSPGGRASINP