; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025258 (gene) of Chayote v1 genome

Gene IDSed0025258
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:14728755..14736359
RNA-Seq ExpressionSed0025258
SyntenySed0025258
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2875.76Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKN+NKKK+SGA+SMDI+E+   +LPQAMDVSESAV   AS A+NLKLKKGRPMKRS+NVRKT A+AKAI K+EQSA+K+LKNQ KT+RI SAKTLYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]1.4e-2875.76Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKNRNKKK+ GAVSMD++E+++H+LPQAMDVS S V   AS A++LKLKKGRPMKRS+NVRKTKA AKAI KSEQS +K+LKNQ KT+RIQSAKTLYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]1.1e-2875.76Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKN+NKKK+SGA+SMDI+E+   +LPQAMDVSESAV   AS A+NLKLKKGRPMKRS+NVRKT A+AKAI K+EQSA+K+LKNQ KT+RI SAKTLYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

XP_023538255.1 uncharacterized protein LOC111799087 [Cucurbita pepo subsp. pepo]4.0e-2879.21Show/hide
Query:  MAKNRNKKKK-SGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKK-GRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLY
        MAKNRNKKKK SGA+SMDI+E+++H+LPQAMDVSESAV   AS A+NLKLKK GR MKRS+NVRKTKA AKAI KSEQSA+K+LKNQGKT+RI SAKTLY
Subjt:  MAKNRNKKKK-SGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKK-GRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLY

Query:  E
        E
Subjt:  E

XP_038903593.1 uncharacterized protein LOC120090147 [Benincasa hispida]2.1e-2976.77Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKNRNKKK+SG VSMD++E+ +H+LPQAMDVSESAV    S A+NLKLKKGRPMKRS+NVRKTKA AKAI KSEQS +K+LKNQ KT+RIQSAK LYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A1S3BUB2 uncharacterized protein LOC1034933626.7e-2975.76Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKNRNKKK+ GAVSMD++E+++H+LPQAMDVS S V   AS A++LKLKKGRPMKRS+NVRKTKA AKAI KSEQS +K+LKNQ KT+RIQSAKTLYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

A0A4D6NBD5 Uncharacterized protein8.8e-2163Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLK-KGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKNRNKKK++G VSMD S+  + + PQAMD SES V N  S AIN+K+K KGRPMKRS+NVRK KA AKA+  +E+S +KV KN+ K SR++SAK+LYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLK-KGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

A0A6A6MLZ5 Uncharacterized protein1.0e-2167.68Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKNRNKKKK+GAVSMDI+E  +  +PQAMD SES V  +AS   N K+ KGRPMKRS+NVRK KA AKAI K+EQS +KVLKN+ KT+R QSAK LY+
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

A0A6J1EMH0 uncharacterized protein LOC1114358675.2e-2975.76Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKN+NKKK+SGA+SMDI+E+   +LPQAMDVSESAV   AS A+NLKLKKGRPMKRS+NVRKT A+AKAI K+EQSA+K+LKNQ KT+RI SAKTLYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833164.4e-2875.76Show/hide
Query:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE
        MAKN+N KK+SGA+SMDI+E+  H+LPQAMDVSESAV   AS A+NLKLKKGRPMKRS+NVRKT A+AKAI K+EQSA+K+LKNQ KT+RI SAKTLYE
Subjt:  MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAATAGGAACAAAAAGAAGAAAAGTGGGGCTGTTTCAATGGACATATCCGAAGATGCACTTCACCAGCTCCCTCAAGCCATGGATGTGTCTGAGTCTGCGGT
TCCAAATACAGCTTCTGCCGCTATCAATCTGAAGTTGAAGAAGGGAAGACCGATGAAGCGATCACAAAATGTTCGGAAAACAAAAGCCAGGGCAAAAGCCATACGTAAGA
GCGAGCAGTCAGCCCAGAAAGTATTGAAAAATCAGGGTAAAACTTCCAGAATTCAGTCTGCAAAAACATTGTATGAATGA
mRNA sequenceShow/hide mRNA sequence
GTTATCCCTAAAAAGAAGGTAGGCGGGCCAATTGAGCCCAACTAATTTTAGGGGCCGAGAAAACAGCCCAAATGGTGTACCTAATTCACCCTTTAAAATCCGACCAAGGG
AATGCTTCTTCATTCTTTCCGTCTTTAGGGTTTTCTTTGGCAATCTCCCGGCGATGGCGAAGAATAGGAACAAAAAGAAGAAAAGTGGGGCTGTTTCAATGGACATATCC
GAAGATGCACTTCACCAGCTCCCTCAAGCCATGGATGTGTCTGAGTCTGCGGTTCCAAATACAGCTTCTGCCGCTATCAATCTGAAGTTGAAGAAGGGAAGACCGATGAA
GCGATCACAAAATGTTCGGAAAACAAAAGCCAGGGCAAAAGCCATACGTAAGAGCGAGCAGTCAGCCCAGAAAGTATTGAAAAATCAGGGTAAAACTTCCAGAATTCAGT
CTGCAAAAACATTGTATGAATGATAGAAGTTGTTAGCCCGATCATTTATGAAGAAATATGCCCTTATATTGTAAAATTGAGTGAACAAAAAGAATTTTGAATAGCTATAC
GTGTTTAGGTTGAGATTTGGAAATTCATTCTAATTTAAAAAGCTTTTTATAA
Protein sequenceShow/hide protein sequence
MAKNRNKKKKSGAVSMDISEDALHQLPQAMDVSESAVPNTASAAINLKLKKGRPMKRSQNVRKTKARAKAIRKSEQSAQKVLKNQGKTSRIQSAKTLYE