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Sed0025262 (gene) of Chayote v1 genome

Gene IDSed0025262
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG08:32574042..32575160
RNA-Seq ExpressionSed0025262
SyntenySed0025262
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064730.1 putative transmembrane protein [Cucumis melo var. makuwa]6.4e-4958.14Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS--SSPKRQDE----------STLGCAATKACTGESVKEGEG-TQELPLPPKM
        MVR+   D+N +IHP ISL LL AGMAA IAMITTLCGVRS+R    S  SSP   +           +T    AT A   +   E EG  +ELPLPPKM
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS--SSPKRQDE----------STLGCAATKACTGESVKEGEG-TQELPLPPKM

Query:  QQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQ----KSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMS
        QQ+ S      + KSASER+LN ++S+S+KVPRSLS V+NHL+EGRQ    K K +DSIWTKTIILG+KCKVS++EDG+IYEGKGKKI+AYHPRA + MS
Subjt:  QQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQ----KSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMS

Query:  NISMSTQGSAIHAES
         ISMS Q SA  AE+
Subjt:  NISMSTQGSAIHAES

KAG6585751.1 hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3551.78Show/hide
Query:  LVAGMAAIIAMITTLCGVRSQ-------RGWAASSSPKRQD-----ESTLGCAATKACTGESVKEGEGTQ----ELPLPPKMQQLASPRAATHMSKSASE
        + AGM A IAMIT LCGVRS+          ++ ++ K+QD      +T   A T    GES  +G  T+    ELPLPPKMQQ+ASP   + ++KSASE
Subjt:  LVAGMAAIIAMITTLCGVRSQ-------RGWAASSSPKRQD-----ESTLGCAATKACTGESVKEGEGTQ----ELPLPPKMQQLASPRAATHMSKSASE

Query:  RRLNRVKSLSMKVPRSLSFVKNHLEEG----RQKSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNISMSTQGSAIHAES
        RRL  + SL+MKVPRS S  +  LEEG    ++K   ++ IW KTIILG+KC+VS++EDGVIYEGKGK+ISAYHPR+ + MS IS+S Q SAI AE+
Subjt:  RRLNRVKSLSMKVPRSLSFVKNHLEEG----RQKSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNISMSTQGSAIHAES

KAG6598610.1 hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4858.17Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS--SSPKRQDESTLGCAA--TKACTGESVKEG--EGTQELPLPPKMQQLASPR
        MVR+   DEN +IHP ISLSLL AGMAA IAMITTLCG RS++   AS  SSP   D      A+       GE+  +G  +G +ELPLPPKMQQL S  
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS--SSPKRQDESTLGCAA--TKACTGESVKEG--EGTQELPLPPKMQQLASPR

Query:  AATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQKS----KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNISMSTQ
          T +SKSASER+L  +KS+++ VPRSLS  +++L++GR K     K +DSIWTKTIILG+KCKV+++EDG+IYEGKGKKISAYHPRA + MS  S+S Q
Subjt:  AATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQKS----KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNISMSTQ

Query:  GSAIHAES
        GSAI AE+
Subjt:  GSAIHAES

KGN47811.2 hypothetical protein Csa_018925 [Cucumis sativus]5.8e-5057.75Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS------SSPKRQDE-----STLGCAATKACTGESVKEGEGTQELPLPPKMQQ
        MVR+   D+N +IHP I L LL AGMAA I+MITTLCGVRS+R    S      ++  + DE     +T    A     GE+  EGE  +ELPLPPKMQQ
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS------SSPKRQDE-----STLGCAATKACTGESVKEGEGTQELPLPPKMQQ

Query:  LASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQKS----KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNI
        +AS    + +SKSASER+LN ++S+S+KVPRSLS V+NHL+EGRQ+     K +DSIWTKTIILG+KCKVS++EDG+IYEGKGKKI+AYHPRA + MS I
Subjt:  LASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQKS----KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNI

Query:  SMSTQGSAIHAES
        SMS Q SA+ AE+
Subjt:  SMSTQGSAIHAES

XP_023002698.1 uncharacterized protein LOC111496482 [Cucurbita maxima]2.6e-4251.39Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS-----SSPKRQD-----ESTLGCAATKACTGESVKEGEGTQ----ELPLPPK
        MV +   DEN +IHP ISL+L+ AGM   IAMIT LCGVRS+R  + S     ++ K+QD      +T   A      G+S  +G  T+    ELPLPPK
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS-----SSPKRQD-----ESTLGCAATKACTGESVKEGEGTQ----ELPLPPK

Query:  MQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEG----RQKSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVM
        MQQ+ASP   + ++KSASERRL  +  ++M+VPRS S  +  LEEG    ++K K ++ IW KTIILG+KC+VS++EDGVIYEGKGK+ISAYHPR+ + M
Subjt:  MQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEG----RQKSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVM

Query:  SNISMSTQGSAIHAES
        S IS+S Q SAI AE+
Subjt:  SNISMSTQGSAIHAES

TrEMBL top hitse value%identityAlignment
A0A0A0KD46 Uncharacterized protein1.2e-4057.69Show/hide
Query:  MITTLCGVRSQRGWAAS------SSPKRQDE-----STLGCAATKACTGESVKEGEGTQELPLPPKMQQLASPRAATHMSKSASERRLNRVKSLSMKVPR
        MITTLCGVRS+R    S      ++  + DE     +T    A     GE+  EGE  +ELPLPPKMQQ+AS    + +SKSASER+LN ++S+S+KVPR
Subjt:  MITTLCGVRSQRGWAAS------SSPKRQDE-----STLGCAATKACTGESVKEGEGTQELPLPPKMQQLASPRAATHMSKSASERRLNRVKSLSMKVPR

Query:  SLSFVKNHLEEGRQKS----KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNISMSTQGSAIHAES
        SLS V+NHL+EGRQ+     K +DSIWTKTIILG+KCKVS++EDG+IYEGKGKKI+AYHPRA + MS ISMS Q SA+ AE+
Subjt:  SLSFVKNHLEEGRQKS----KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNISMSTQGSAIHAES

A0A5A7VC31 Putative transmembrane protein3.1e-4958.14Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS--SSPKRQDE----------STLGCAATKACTGESVKEGEG-TQELPLPPKM
        MVR+   D+N +IHP ISL LL AGMAA IAMITTLCGVRS+R    S  SSP   +           +T    AT A   +   E EG  +ELPLPPKM
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS--SSPKRQDE----------STLGCAATKACTGESVKEGEG-TQELPLPPKM

Query:  QQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQ----KSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMS
        QQ+ S      + KSASER+LN ++S+S+KVPRSLS V+NHL+EGRQ    K K +DSIWTKTIILG+KCKVS++EDG+IYEGKGKKI+AYHPRA + MS
Subjt:  QQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQ----KSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMS

Query:  NISMSTQGSAIHAES
         ISMS Q SA  AE+
Subjt:  NISMSTQGSAIHAES

A0A6A1WQ24 Uncharacterized protein1.7e-2640.09Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAASSSP----------KRQDESTLGCAATKACTGES---------VKEGEGT---
        MVR +  +E  + HP +S SLL  G+AA IA IT LCG R    W   S P          ++ D S L  A T   T ++           E EGT   
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAASSSP----------KRQDESTLGCAATKACTGES---------VKEGEGT---

Query:  -----QELPLPPKMQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQKS-KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKIS
             +ELPLPP M  +   ++   ++KS+S+R  N  K+L+MK+PRSLS  +      R+K   ++DSIW KTIILG+KCKV +++D VIY+GKGK+IS
Subjt:  -----QELPLPPKMQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEGRQKS-KADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKIS

Query:  AYHPRAHTVMSNISMSTQGSAIHAESK
         YHP+     S IS+S +GS    E++
Subjt:  AYHPRAHTVMSNISMSTQGSAIHAESK

A0A6J1KUB9 uncharacterized protein LOC1114964821.3e-4251.39Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS-----SSPKRQD-----ESTLGCAATKACTGESVKEGEGTQ----ELPLPPK
        MV +   DEN +IHP ISL+L+ AGM   IAMIT LCGVRS+R  + S     ++ K+QD      +T   A      G+S  +G  T+    ELPLPPK
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAAS-----SSPKRQD-----ESTLGCAATKACTGESVKEGEGTQ----ELPLPPK

Query:  MQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEG----RQKSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVM
        MQQ+ASP   + ++KSASERRL  +  ++M+VPRS S  +  LEEG    ++K K ++ IW KTIILG+KC+VS++EDGVIYEGKGK+ISAYHPR+ + M
Subjt:  MQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVKNHLEEG----RQKSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVM

Query:  SNISMSTQGSAIHAES
        S IS+S Q SAI AE+
Subjt:  SNISMSTQGSAIHAES

A0A7N2KRH9 Uncharacterized protein2.5e-3044.71Show/hide
Query:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAASSSP---KRQDESTLGCAATKACTGESVKEGEGTQ-------------ELPLP
        M R + +DEN +IHPE S SLL  GM A IAMIT LCGVRS++  +  SSP   K+++ S +  +A+   T  S K  E  +             ELPLP
Subjt:  MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAASSSP---KRQDESTLGCAATKACTGESVKEGEGTQ-------------ELPLP

Query:  PKMQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVK----NHLEEGRQKSKAD----DSIWTKTIILGDKCKVSEQED-GVIYEGKGKKISAYH
        P M+ +    +   ++KS+SERRL    SLSMK+PRSLS  K       EE  Q+ K D    D++W KTIILG+KCKV  ++D  VIY+GKG +ISAYH
Subjt:  PKMQQLASPRAATHMSKSASERRLNRVKSLSMKVPRSLSFVK----NHLEEGRQKSKAD----DSIWTKTIILGDKCKVSEQED-GVIYEGKGKKISAYH

Query:  PRAHTVMS
        P+  ++ S
Subjt:  PRAHTVMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAAATTTGGCAGCGGATGAGAACCAAATAATCCATCCTGAGATCTCCCTCTCCCTTTTGGTGGCCGGAATGGCGGCGATCATCGCCATGATCACGACGCTGTG
CGGCGTCCGATCCCAGCGAGGATGGGCAGCGTCATCATCTCCCAAAAGACAAGACGAAAGCACATTAGGGTGTGCGGCGACAAAGGCATGTACCGGAGAGTCAGTAAAAG
AGGGGGAGGGAACACAAGAGCTTCCCCTGCCACCCAAAATGCAGCAATTGGCGAGCCCGAGGGCGGCGACCCACATGTCGAAATCGGCATCGGAGAGAAGGCTGAACCGG
GTGAAGAGCCTGAGCATGAAAGTCCCGAGAAGCCTTTCGTTTGTGAAGAACCATTTGGAGGAAGGGAGGCAGAAGAGCAAAGCGGACGACTCGATATGGACGAAGACGAT
AATATTAGGCGACAAATGCAAGGTTTCAGAGCAAGAAGATGGGGTTATCTATGAAGGTAAAGGGAAGAAGATTTCAGCTTATCATCCCAGAGCTCATACTGTCATGTCCA
ATATTTCTATGTCAACGCAAGGTTCTGCCATTCATGCTGAATCTAAATAA
mRNA sequenceShow/hide mRNA sequence
GTTAATTTTGTTGGATAAAACACCAAATTGAAAAATCATAATTTCACCACAAAATTAAGCAGTCCCATTTGGGCTGTCATAAAATTTGATGAAGAAACACACCAAATTTG
TTATTTTTAGAATACCAAGAAGAATTTCAAAAGAAATTTTATTTACTCAAGCTTCTCCACCTCTGTTTCTCTCCCATTTTCTCCTTTATTCAAGCATTCTGTTTCGCTTT
CTTTTATTAAAAGAAACACACACAGAGCCCAAAAAAAGAATTCCTTTTTCCTTTTTCCCCCTCATTCCTAATCTCATTTCCTTGCAAAAAAAAATTAAAAAAAAAATTCA
ATTTTTGCCACTTTCTTGTTACCCACTTGGGTGTAAGAAAAAACAGAGCATCCCCAGAAAAATGAACAAACAAAAACAGAGCATCTCAATTGGGTACAACTTTCCTCTGT
TTTTATAAATGTTTTAGCCATGGTGAGAAATTTGGCAGCGGATGAGAACCAAATAATCCATCCTGAGATCTCCCTCTCCCTTTTGGTGGCCGGAATGGCGGCGATCATCG
CCATGATCACGACGCTGTGCGGCGTCCGATCCCAGCGAGGATGGGCAGCGTCATCATCTCCCAAAAGACAAGACGAAAGCACATTAGGGTGTGCGGCGACAAAGGCATGT
ACCGGAGAGTCAGTAAAAGAGGGGGAGGGAACACAAGAGCTTCCCCTGCCACCCAAAATGCAGCAATTGGCGAGCCCGAGGGCGGCGACCCACATGTCGAAATCGGCATC
GGAGAGAAGGCTGAACCGGGTGAAGAGCCTGAGCATGAAAGTCCCGAGAAGCCTTTCGTTTGTGAAGAACCATTTGGAGGAAGGGAGGCAGAAGAGCAAAGCGGACGACT
CGATATGGACGAAGACGATAATATTAGGCGACAAATGCAAGGTTTCAGAGCAAGAAGATGGGGTTATCTATGAAGGTAAAGGGAAGAAGATTTCAGCTTATCATCCCAGA
GCTCATACTGTCATGTCCAATATTTCTATGTCAACGCAAGGTTCTGCCATTCATGCTGAATCTAAATAACACACTTCAACGCTTTTGCTGCTGATGTCTTCTTTCTTCCT
TTGCTTTCCATTAAGTTAC
Protein sequenceShow/hide protein sequence
MVRNLAADENQIIHPEISLSLLVAGMAAIIAMITTLCGVRSQRGWAASSSPKRQDESTLGCAATKACTGESVKEGEGTQELPLPPKMQQLASPRAATHMSKSASERRLNR
VKSLSMKVPRSLSFVKNHLEEGRQKSKADDSIWTKTIILGDKCKVSEQEDGVIYEGKGKKISAYHPRAHTVMSNISMSTQGSAIHAESK