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Sed0025296 (gene) of Chayote v1 genome

Gene IDSed0025296
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:2231024..2231314
RNA-Seq ExpressionSed0025296
SyntenySed0025296
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1224144.1 hypothetical protein CJ030_MR2G024451 [Morella rubra]6.8e-0540.45Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPNEKYITHFCHFYVQL
        ML+R ++A S+ S+ST L GW R RR               RRGFCLGS+ VV+      P RMLK++I+ +APN ++I  +    V L
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPNEKYITHFCHFYVQL

KAG2669707.1 hypothetical protein I3760_14G045800 [Carya illinoinensis]4.0e-0546.67Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPN
        MLRR ++  S+ S+ST LVGW RPRR               RRG CLGSR VV+      P RMLK++I+ +APN
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPN

OAY34862.1 hypothetical protein MANES_12G052800v8 [Manihot esculenta]2.3e-0540.96Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGS------RVVVRPFRMLKRLILKLAPNEKYITHFC
        M +R ++A S+ S+ST LVGW RPRR               RRGFCLGS      RV++ P RMLK++I+K+  N +++   C
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGS------RVVVRPFRMLKRLILKLAPNEKYITHFC

XP_018827516.1 uncharacterized protein LOC108996201 [Juglans regia]4.0e-0546.67Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPN
        MLRR ++  S+ S+ST LVGW RPRR               RRG CLGSR VV+      P RMLK++I+ +APN
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPN

XP_034916044.1 uncharacterized protein LOC118049962 [Populus alba]3.4e-0441.3Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSR------VVVRPFRMLKRLILKLAPNEKYITHFCHFYVQLCFL
        ML+R  ++ S+ S+ST LVGW R RR               RRGFCL SR      V+V P RMLK +I+ +APN ++I     +Y+ L FL
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSR------VVVRPFRMLKRLILKLAPNEKYITHFCHFYVQLCFL

TrEMBL top hitse value%identityAlignment
A0A0A0K5B5 Uncharacterized protein6.6e-1463.01Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPR---------------RRRGFCLGSRVVVRPFRMLKRLILKLAPNEKYI
        ML+RE +A S+CS+S GLVGW RPR               RRRGFCLGSRVVV PFRMLKRLI++LAPNEK I
Subjt:  MLRRETMAASICSSSTGLVGWSRPR---------------RRRGFCLGSRVVVRPFRMLKRLILKLAPNEKYI

A0A2C9UTZ0 Uncharacterized protein1.1e-0540.96Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGS------RVVVRPFRMLKRLILKLAPNEKYITHFC
        M +R ++A S+ S+ST LVGW RPRR               RRGFCLGS      RV++ P RMLK++I+K+  N +++   C
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGS------RVVVRPFRMLKRLILKLAPNEKYITHFC

A0A2I4F790 uncharacterized protein LOC1089962011.9e-0546.67Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPN
        MLRR ++  S+ S+ST LVGW RPRR               RRG CLGSR VV+      P RMLK++I+ +APN
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPN

A0A6A1WFY9 Uncharacterized protein3.3e-0540.45Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPNEKYITHFCHFYVQL
        ML+R ++A S+ S+ST L GW R RR               RRGFCLGS+ VV+      P RMLK++I+ +APN ++I  +    V L
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR---------------RRGFCLGSRVVVR------PFRMLKRLILKLAPNEKYITHFCHFYVQL

A0A6J1BM94 uncharacterized protein LOC1104289932.1e-0440.43Show/hide
Query:  MLRRETMAASICSSSTGLVGWSRPRR-----------------RRGFCLGSR------VVVRPFRMLKRLILKLAPNEKYITHFCHFYVQLCFL
        ML+R +M  S+  +ST LVGW R RR                 RRGFCLGSR      V+V P RMLK++I+++ P  K+I     +Y+ L FL
Subjt:  MLRRETMAASICSSSTGLVGWSRPRR-----------------RRGFCLGSR------VVVRPFRMLKRLILKLAPNEKYITHFCHFYVQLCFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGAGAGAAACCATGGCCGCATCCATATGCTCGAGCTCGACGGGGCTAGTTGGTTGGAGTCGCCCACGCCGACGGAGAGGGTTCTGTCTCGGGTCTCGAGTTGT
TGTCAGGCCTTTCCGAATGCTCAAGAGGTTGATTTTGAAGTTGGCTCCAAATGAGAAGTATATTACTCATTTTTGCCATTTTTACGTCCAACTGTGTTTCCTCTTAGTTG
ATGAATGTTGTTATTATGTGAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGAGAGAAACCATGGCCGCATCCATATGCTCGAGCTCGACGGGGCTAGTTGGTTGGAGTCGCCCACGCCGACGGAGAGGGTTCTGTCTCGGGTCTCGAGTTGT
TGTCAGGCCTTTCCGAATGCTCAAGAGGTTGATTTTGAAGTTGGCTCCAAATGAGAAGTATATTACTCATTTTTGCCATTTTTACGTCCAACTGTGTTTCCTCTTAGTTG
ATGAATGTTGTTATTATGTGAATGAATGA
Protein sequenceShow/hide protein sequence
MLRRETMAASICSSSTGLVGWSRPRRRRGFCLGSRVVVRPFRMLKRLILKLAPNEKYITHFCHFYVQLCFLLVDECCYYVNE