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Sed0025305 (gene) of Chayote v1 genome

Gene IDSed0025305
OrganismSechium edule (Chayote v1)
DescriptionRibosomal protein L31
Genome locationLG11:1006043..1008534
RNA-Seq ExpressionSed0025305
SyntenySed0025305
Gene Ontology termsGO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030387.1 hypothetical protein SDJN02_08734, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-2586.49Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVYH RARRQLAESIGQIAKFKRRYEK    NDE  EKAEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
XP_022143125.1 uncharacterized protein LOC111013069 [Momordica charantia]3.9e-2584.51Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVYHFRA+RQ+AES+GQIAKFKRRYEKG  E+ E AEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK
XP_022946219.1 uncharacterized protein LOC111450371 [Cucurbita moschata]7.9e-2687.84Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVYHFRARRQLAESIGQIAKFKRRYEK    NDE  EKAEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
XP_022999184.1 uncharacterized protein LOC111493644 [Cucurbita maxima]8.7e-2585.14Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVY FRARRQLAES+GQIAKFKRRYEK    NDE  EKAEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
XP_023547264.1 uncharacterized protein LOC111806134 [Cucurbita pepo subsp. pepo]5.1e-2585.14Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVYH RARRQLAES+GQIAKFKRRYEK    NDE  EKAEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
TrEMBL top hitse value%identityAlignment
A0A2I4ESM8 uncharacterized protein LOC1089923254.7e-2486.76Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRY-EKGNDEDAE
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVYHFRA+RQ+AESIGQ+AKFKRRY EKGN ED E
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRY-EKGNDEDAE
A0A5N6RT12 Uncharacterized protein4.7e-2486.15Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDED
        MKKG+HPQ QWISYVTQSGRLMHV MTKIHH GKVYHFRA+RQ+AES+GQIAKFKRR+E GNDED
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDED
A0A6J1CPB3 uncharacterized protein LOC1110130691.9e-2584.51Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVYHFRA+RQ+AES+GQIAKFKRRYEKG  E+ E AEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK
A0A6J1G367 uncharacterized protein LOC1114503713.8e-2687.84Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVYHFRARRQLAESIGQIAKFKRRYEK    NDE  EKAEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
A0A6J1KGB8 uncharacterized protein LOC1114936444.2e-2585.14Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMTKIHH GKVY FRARRQLAES+GQIAKFKRRYEK    NDE  EKAEK
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKG---NDEDAEKAEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55125.1 Ribosomal protein L313.2e-2576.06Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMT+IHH GKVYHF A+RQ+A+SIGQIAKFKRR+   N+++AE AE+
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK
AT5G55125.2 Ribosomal protein L313.2e-2576.06Show/hide
Query:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK
        MKKG+HPQ QWISYVTQSGRLMHVMMT+IHH GKVYHF A+RQ+A+SIGQIAKFKRR+   N+++AE AE+
Subjt:  MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGGCATGCACCCTCAACAGCAGTGGATATCATATGTCACTCAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACCATACTGGTAAAGTCTATCA
CTTCAGAGCAAGGCGCCAATTGGCTGAAAGTATCGGGCAGATTGCCAAGTTCAAACGTCGTTACGAGAAGGGGAACGATGAGGACGCCGAAAAGGCTGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTCCACTTTCATGAAGGACATCAGAGTAAATTTACAACCACCCTTCATCGTCTTCCTCACTCGCCTCCCGCCGTGAACAAAACAGAGCTTCTTCTTCAATCTCTGTATCA
GAATACTAATCTCTCTCTATTTTCTTTTCATTTTTCCAATCTTATTTCTGTTTTTGCTCAATTGGAAACGGACGCATTTCAACAATCAGAGCCTTGGGGGAAGATTTTGA
CATTGCTGTTCACCCAGTTCTTCAAAACTTTAGGGTTGTCATTATCTATTTGTAGAATGAAGAAAGGCATGCACCCTCAACAGCAGTGGATATCATATGTCACTCAGAGT
GGCAGATTGATGCACGTTATGATGACCAAGATACACCATACTGGTAAAGTCTATCACTTCAGAGCAAGGCGCCAATTGGCTGAAAGTATCGGGCAGATTGCCAAGTTCAA
ACGTCGTTACGAGAAGGGGAACGATGAGGACGCCGAAAAGGCTGAAAAGTGAGGTTCCTTGCAGCTCAAGAACCAGCTGTTTTCTTGGATCATTATGGACTCGGTTTCAA
GGGCATGACCTTGTTAGTGTTAGACACTGATTTCTTTTCGTAGTATAGTATTTTGCAGTACACTAAGTTATTAATTATAATGTTTTTGATATGCTTTTACCATTAGAATA
TCTAATGTGCATTTCTAATTTCTGCTCAATAAATGTTGATCATTTTCCACCTTGTTTATCTAATTTTCTAGCCGAACTCACAGGGCTTGTTATGCTACTAAAAAACCTTA
GAATAGTGGAGTTGTTGACTTAAGTATACTGAAGTAGTATGCCTCTCCCCTTTCAGGACTCGAAGTTGGATGTACAACTTCCCG
Protein sequenceShow/hide protein sequence
MKKGMHPQQQWISYVTQSGRLMHVMMTKIHHTGKVYHFRARRQLAESIGQIAKFKRRYEKGNDEDAEKAEK