; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025334 (gene) of Chayote v1 genome

Gene IDSed0025334
OrganismSechium edule (Chayote v1)
DescriptionProtein IDA-like 4
Genome locationLG10:3168906..3169507
RNA-Seq ExpressionSed0025334
SyntenySed0025334
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7998278.1 hypothetical protein FH972_002837 [Carpinus fangiana]9.5e-1556.1Show/hide
Query:  MFVCGRRTSRTKQLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        M VC R  +R   L+W+ L+   ++  C+ S   T   FK KP   + GHF GFLPRRIPIPASGPSRKHNDIGL+ SWRSP
Subjt:  MFVCGRRTSRTKQLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

KAE8647464.1 hypothetical protein Csa_004278 [Cucumis sativus]1.0e-1654.95Show/hide
Query:  VCGRRT-------SRTKQLVW-MILILFLLVN--------CCNASSP--PTKQP----------FKSKPK---VHYFGHFFGFLPRRIPIPASGPSRKHN
        VC RR+       SR K + W M+LI+ LL+N        CCNASSP    KQ            K KPK    +Y+GHFFGFLPRRIPIPASGPSRKHN
Subjt:  VCGRRT-------SRTKQLVW-MILILFLLVN--------CCNASSP--PTKQP----------FKSKPK---VHYFGHFFGFLPRRIPIPASGPSRKHN

Query:  DIGLRSSWRSP
        DIGLR SWRSP
Subjt:  DIGLRSSWRSP

KAF3970106.1 hypothetical protein CMV_006161 [Castanea mollissima]2.5e-1562.86Show/hide
Query:  QLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        +L+W+ L+L  +V  C+ S       FK KPK  Y GHF GFLPRRIPIPASGPSRKHNDIGL+ SWRSP
Subjt:  QLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

KAG7034431.1 Protein IDA-LIKE 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1765Show/hide
Query:  RTKQLVWMILILFL----LVNCCNASSPPTKQP--FKSKP-KVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        RT++L WM+L++ L    L+ CCN    PTK    FK KP K H +GHFFGFLPRRIPIPASGPSRKHNDIGLR SWR+P
Subjt:  RTKQLVWMILILFL----LVNCCNASSPPTKQP--FKSKP-KVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

PRQ49277.1 hypothetical protein RchiOBHm_Chr2g0120121 [Rosa chinensis]3.3e-1556.84Show/hide
Query:  MFVCGRRTSRTKQL--VWMIL-ILFLLVNCCNASSPPTKQ---------PFKSKPKVH-YFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        M  C RR   TK L  VW+ L  +F+LVNC + S   T+Q          FK KPK H Y GHF GFLPRRIPIPASGPSRKHN IGL+ +WRSP
Subjt:  MFVCGRRTSRTKQL--VWMIL-ILFLLVNCCNASSPPTKQ---------PFKSKPKVH-YFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ3 Uncharacterized protein4.6e-1559.55Show/hide
Query:  MILILFLLVN--------CCNASSP--PTKQP----------FKSKPK---VHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        M+LI+ LL+N        CCNASSP    KQ            K KPK    +Y+GHFFGFLPRRIPIPASGPSRKHNDIGLR SWRSP
Subjt:  MILILFLLVN--------CCNASSP--PTKQP----------FKSKPK---VHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

A0A2P6RS79 Uncharacterized protein1.6e-1556.84Show/hide
Query:  MFVCGRRTSRTKQL--VWMIL-ILFLLVNCCNASSPPTKQ---------PFKSKPKVH-YFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        M  C RR   TK L  VW+ L  +F+LVNC + S   T+Q          FK KPK H Y GHF GFLPRRIPIPASGPSRKHN IGL+ +WRSP
Subjt:  MFVCGRRTSRTKQL--VWMIL-ILFLLVNCCNASSPPTKQ---------PFKSKPKVH-YFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

A0A5N6QG36 Uncharacterized protein4.6e-1556.1Show/hide
Query:  MFVCGRRTSRTKQLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        M VC R  +R   L+W+ L+   ++  C+ S   T   FK KP   + GHF GFLPRRIPIPASGPSRKHNDIGL+ SWRSP
Subjt:  MFVCGRRTSRTKQLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

A0A7N2LYR6 Uncharacterized protein1.2e-1562.86Show/hide
Query:  QLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        +L+W+ L+L  +V  C+ S       FK KPK  Y GHF GFLPRRIPIPASGPSRKHNDIGL+ SWRSP
Subjt:  QLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

M5W2Q5 Uncharacterized protein1.3e-1462.32Show/hide
Query:  LVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP
        L+  + + F+  N  N  +  T Q FK KPK  + GHF GFLPRRIPIPASGPSRKHNDIGLR SWRSP
Subjt:  LVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP

SwissProt top hitse value%identityAlignment
Q6DUW6 Protein IDA-LIKE 45.6e-1041.77Show/hide
Query:  RRTSRTKQLVWMILILFL-LVNCCNASSPPTKQPFKSKPKVHYF------GHFFGFLPRRIPIPASGPSRKHNDIGLRS
        RR S  +   +++LIL L  ++ C+AS   +   F   P   +       GHF GFLPR +P+PAS PSRKHNDIG+++
Subjt:  RRTSRTKQLVWMILILFL-LVNCCNASSPPTKQPFKSKPKVHYF------GHFFGFLPRRIPIPASGPSRKHNDIGLRS

Q6DUW7 Protein IDA-LIKE 31.4e-0839.24Show/hide
Query:  MILILFLLVNCC---------NASSPPTKQPFKSKPKVHYFG--------HFFGFLPRRIPIPASGPSRKHNDIGLRSS
        ++++L +L++CC         N SSPP ++   S P  H            F G LPR+ P+P SGPSRKHN+IGL S+
Subjt:  MILILFLLVNCC---------NASSPPTKQPFKSKPKVHYFG--------HFFGFLPRRIPIPASGPSRKHNDIGLRSS

Q6DUW9 Protein IDA-LIKE 21.6e-0951.39Show/hide
Query:  MILILFLLVNCCNASSPPTKQPFKSKP-KVHYFG------HFFGFLPRRIPIPASGPSRKHNDIGLRSSWRS
        ++L+L LL+  CN +   T   F SKP K H          F GFLPR  P+PASGPSRKHNDIGL S  RS
Subjt:  MILILFLLVNCCNASSPPTKQPFKSKP-KVHYFG------HFFGFLPRRIPIPASGPSRKHNDIGLRSSWRS

Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein8.0e-0435.48Show/hide
Query:  LVWMILILFLLV--NCCNASSPPTKQPFKSKPKVHYF--GHFFGFLPRRIPIPASGPSRKHN
        +V +  +LFL    +C  A+        K   K   F   H FG+LP+ +PIP S PS++HN
Subjt:  LVWMILILFLLV--NCCNASSPPTKQPFKSKPKVHYF--GHFFGFLPRRIPIPASGPSRKHN

AT1G76952.1 inflorescence deficient in abscission (IDA)-like 54.7e-0465.38Show/hide
Query:  FFGFLPRRIPIPASGPSRKHNDIGLR
        F GFLP+ +PIP S PSRKHN  GL+
Subjt:  FFGFLPRRIPIPASGPSRKHNDIGLR

AT3G18715.1 inflorescence deficient in abscission (IDA)-like 44.0e-1141.77Show/hide
Query:  RRTSRTKQLVWMILILFL-LVNCCNASSPPTKQPFKSKPKVHYF------GHFFGFLPRRIPIPASGPSRKHNDIGLRS
        RR S  +   +++LIL L  ++ C+AS   +   F   P   +       GHF GFLPR +P+PAS PSRKHNDIG+++
Subjt:  RRTSRTKQLVWMILILFL-LVNCCNASSPPTKQPFKSKPKVHYF------GHFFGFLPRRIPIPASGPSRKHNDIGLRS

AT5G09805.1 inflorescence deficient in abscission (IDA)-like 39.8e-1039.24Show/hide
Query:  MILILFLLVNCC---------NASSPPTKQPFKSKPKVHYFG--------HFFGFLPRRIPIPASGPSRKHNDIGLRSS
        ++++L +L++CC         N SSPP ++   S P  H            F G LPR+ P+P SGPSRKHN+IGL S+
Subjt:  MILILFLLVNCC---------NASSPPTKQPFKSKPKVHYFG--------HFFGFLPRRIPIPASGPSRKHNDIGLRSS

AT5G64667.1 inflorescence deficient in abscission (IDA)-like 21.2e-1051.39Show/hide
Query:  MILILFLLVNCCNASSPPTKQPFKSKP-KVHYFG------HFFGFLPRRIPIPASGPSRKHNDIGLRSSWRS
        ++L+L LL+  CN +   T   F SKP K H          F GFLPR  P+PASGPSRKHNDIGL S  RS
Subjt:  MILILFLLVNCCNASSPPTKQPFKSKP-KVHYFG------HFFGFLPRRIPIPASGPSRKHNDIGLRSSWRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTTGTGGAAGAAGAACATCAAGAACAAAGCAGCTTGTTTGGATGATCTTGATATTATTTCTATTGGTAAATTGTTGCAATGCTTCTTCTCCCCCAACCAAACA
GCCCTTCAAATCAAAGCCAAAGGTTCATTATTTTGGGCATTTTTTTGGGTTCTTGCCAAGAAGAATACCAATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTG
GCTTGAGATCATCTTGGAGATCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
CTTGTGCAAGCAGAAGCATCTGATTTGTTTAAAGTCATCATCTTTCTCTCTCTTTCTCTTTCTATTTCTCTCTCTCCATTTTGATATCAATTTTCTTATTTTCATTTGCT
CCATTGATATCATGTTTGTTTGTGGAAGAAGAACATCAAGAACAAAGCAGCTTGTTTGGATGATCTTGATATTATTTCTATTGGTAAATTGTTGCAATGCTTCTTCTCCC
CCAACCAAACAGCCCTTCAAATCAAAGCCAAAGGTTCATTATTTTGGGCATTTTTTTGGGTTCTTGCCAAGAAGAATACCAATTCCTGCCTCTGGTCCTTCAAGAAAACA
CAATGATATTGGCTTGAGATCATCTTGGAGATCTCCTTGAAGAAGATTCAATATTTTTTTTTTCTTTTTTTTTTATTCAAATGAAAAAGGTAATTGTTCATCTTGTTTAA
TTGCCTTTTTTTTTCTTTTGGGGGATGAAAATTTGAGAGATGGGTTCATATTGTATATCGGATTGTTTTCATGGGTTAGTCTAATTTTTTTTTTTTTTAACATGTTTCAC
ACTATTGTTAGTTTTTTTTCTTATAATATATATGTATGTAATGGATGTTTAA
Protein sequenceShow/hide protein sequence
MFVCGRRTSRTKQLVWMILILFLLVNCCNASSPPTKQPFKSKPKVHYFGHFFGFLPRRIPIPASGPSRKHNDIGLRSSWRSP