CuGenDBv2

Gene ID	Sed0025347
Organism	Sechium edule (Chayote v1)
Description	ThiF domain-containing protein
Genome location	LG05:7185890..7188129
RNA-Seq Expression	Sed0025347
Synteny	Sed0025347
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_010657296.1 PREDICTED: uncharacterized protein LOC104880884 [Vitis vinifera]

4.1e-20

47.24

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR++R   +SS+ R ++FH++LKPGALAQLRDS+I A+S + DS +Q++L RTS+P SSP+     P+I+    FP  AGR +GP CL+RKKL A KS 
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNV
        +  S    S  SD     +VD+F   +
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNV

XP_022944248.1 uncharacterized protein LOC111448755 [Cucurbita moschata]

2.0e-35

59.23

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR+++ S K  ANR + FHK+LKPGALA++RDS+I A+  +++SL+Q+YLRRT++PESSP+    Q EI++  DFP+L+GRV+GPLCLKRKK + IKST
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH
        WFPSP+LQ+  +DL  D I+D F+S+VAAH
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH

XP_022986202.1 uncharacterized protein LOC111484017 [Cucurbita maxima]

5.3e-36

61.54

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR+++LS K  ANR + FHKFLKPGALA++RDS+I A+S +++SL+Q++LRRT++ ESSP+    Q EI++  DFP+L+GRV+GPLCLKRKKLA IK+T
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH
        WFPSP+LQ+  +DL  D IVD F+S+VAAH
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH

XP_023513131.1 uncharacterized protein LOC111777660 [Cucurbita pepo subsp. pepo]

1.8e-36

60.77

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR+++ S K  ANR + FHK+LKPGALA++RDS+I A+S +++SL+Q+YLRRT++ ESSP+    Q EI++  DFP+LAGRV+GPLCLKRKK A IKST
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH
        WFPSP+LQ+  +DL  +PI+D F+S+VAAH
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH

XP_038902395.1 uncharacterized protein LOC120089036 [Benincasa hispida]

3.0e-39

64.62

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        M RKL+ SPK  A+R + FHK+LKPGALAQ+RDSQI AK  +F+SL+Q+YLRRTS   SSP+    Q EI++  DFP+LAGR +GP CLKRKKLAAIK+T
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH
        WFPSP+LQ+  +D+ RDP+VDVF+S+VAAH
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH

TrEMBL top hits

e value

%identity

Alignment

A0A2P5EE91 Uncharacterized protein

2.6e-20

48.46

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR+ R   +SS +R + F K+LKPGALAQ+RDS+I A+S +  SLAQ+   R+S P S P     Q  +     FP  +GRVFGP C +RKKL A K+ 
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH
         FPS +  S   D   DPI+DVFS+++AAH
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH

A0A438EFG1 Uncharacterized protein

2.0e-20

47.24

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR++R   +SS+ R ++FH++LKPGALAQLRDS+I A+S + DS +Q++L RTS+P SSP+     P+I+    FP  AGR +GP CL+RKKL A KS 
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNV
        +  S    S  SD     +VD+F   +
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNV

A0A6J1FXV4 uncharacterized protein LOC111448755

9.7e-36

59.23

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR+++ S K  ANR + FHK+LKPGALA++RDS+I A+  +++SL+Q+YLRRT++PESSP+    Q EI++  DFP+L+GRV+GPLCLKRKK + IKST
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH
        WFPSP+LQ+  +DL  D I+D F+S+VAAH
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH

A0A6J1J6X7 uncharacterized protein LOC111484017

2.6e-36

61.54

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR+++LS K  ANR + FHKFLKPGALA++RDS+I A+S +++SL+Q++LRRT++ ESSP+    Q EI++  DFP+L+GRV+GPLCLKRKKLA IK+T
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH
        WFPSP+LQ+  +DL  D IVD F+S+VAAH
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNVAAH

A5C5X4 Uncharacterized protein

5.7e-20

46.46

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Query:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST
        MNR++R   +SS+ R ++FH++LKPGALAQLRDS+I A+S + DS +Q++L RTS+P SSP+     P+I+    FP  AGR +GP CL+RKKL A KS 
Subjt:  MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKST

Query:  WFPSPDLQSSASDLVRDPIVDVFSSNV
        +  S    S  S+     +VD+F   +
Subjt:  WFPSPDLQSSASDLVRDPIVDVFSSNV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

6.1e-06

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Query:  KSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKSTWF---PSPD
        +S   R   FH+++KPGALAQ+R+++I      F     +         SS   I+  P+       P L  +++GP  + RKKL   +S      PSP+
Subjt:  KSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKSTWF---PSPD

AT5G54970.1 unknown protein

1.4e-07

32.56

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Query:  KSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAG--------DFPALAGRVFGPLCLKRKKLAAIKSTW
        KS A R   FH++LKPGALAQ+R+S+I A+     S   +  R + +    P+  S+    E A           P L  +++GP   +RKKLAA +S  
Subjt:  KSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAG--------DFPALAGRVFGPLCLKRKKLAAIKSTW

Query:  FPSPDLQSSASDLVRDPIVDVFSSNVAAH
          S  +  + +  +   +V+  SS+V AH
Subjt:  FPSPDLQSSASDLVRDPIVDVFSSNVAAH

Sequences

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CDS sequence

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ATGAATCGCAAGCTTCGATTATCGCCCAAATCATCTGCAAATCGGCCGAAATCCTTCCACAAGTTCTTGAAGCCCGGCGCATTGGCGCAGTTGCGAGACTCGCAAATCGT
CGCCAAATCGTGCCAGTTCGATTCGCTCGCTCAGATGTACCTCCGCCGTACTTCCGCTCCGGAATCGTCTCCTGTTTTCATTTCCGATCAGCCGGAGATTGAAATGGCCG
GCGATTTCCCTGCTTTGGCCGGTAGGGTTTTTGGCCCCTTGTGTCTCAAGAGGAAGAAGCTTGCGGCGATTAAGTCCACATGGTTTCCGAGCCCTGATTTGCAGAGTTCT
GCTTCGGATTTAGTTCGAGATCCGATTGTCGACGTGTTTAGTAGCAATGTTGCTGCGCATTGA

mRNA sequence

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AATATTTTCAAACCACCGGCCTGAAGTCTCCATTATTCAATTTCCCTCCATCACGGTCCCGCCGATCCGCCTCTTTCTTTCCCAGCCCTCGAACTCTAAACCCTAACCCT
TCATCCATCTTGAACTATGAATCGCAAGCTTCGATTATCGCCCAAATCATCTGCAAATCGGCCGAAATCCTTCCACAAGTTCTTGAAGCCCGGCGCATTGGCGCAGTTGC
GAGACTCGCAAATCGTCGCCAAATCGTGCCAGTTCGATTCGCTCGCTCAGATGTACCTCCGCCGTACTTCCGCTCCGGAATCGTCTCCTGTTTTCATTTCCGATCAGCCG
GAGATTGAAATGGCCGGCGATTTCCCTGCTTTGGCCGGTAGGGTTTTTGGCCCCTTGTGTCTCAAGAGGAAGAAGCTTGCGGCGATTAAGTCCACATGGTTTCCGAGCCC
TGATTTGCAGAGTTCTGCTTCGGATTTAGTTCGAGATCCGATTGTCGACGTGTTTAGTAGCAATGTTGCTGCGCATTGATTGTGGATCTTCATGTTTGCTGGATAGTTCT
AATTTGAGGTATGGAAGTAAACAAGAAGTTTTTTCAACTGAATCAGGATCTTGGAGAACATGCATTGGGTAAACATCTCTTCAGTTTACTTGAGTTGCTTTCGGGATCAC
GATTGGCCTAATGAACAAGAGTGTCTTTGGAGAATAAAAATGAAATAACCACTCACCTAAAAACTAATTTCTTACATAATTCTTTGACAACCAAATAATGTAGAGTAAGA
CGGTTTGTTCTGCACTAATGCCTCTATATAACTGGGCATGGAACATGATTTCATTTGTATCGCGACTTTTCCATTATACT

Protein sequence

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MNRKLRLSPKSSANRPKSFHKFLKPGALAQLRDSQIVAKSCQFDSLAQMYLRRTSAPESSPVFISDQPEIEMAGDFPALAGRVFGPLCLKRKKLAAIKSTWFPSPDLQSS
ASDLVRDPIVDVFSSNVAAH

Sed0025347 (gene) of Chayote v1 genome