CuGenDBv2

Gene ID	Sed0025365
Organism	Sechium edule (Chayote v1)
Description	Photosystem II CP43 reaction center protein
Genome location	Contig00297:159021..160294
RNA-Seq Expression	Sed0025365
Synteny	Sed0025365
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0010242 - oxygen evolving activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR036001 - Photosystem antenna protein-like superfamily IPR044900 - Photosystem II CP43 reaction centre protein superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAB4072161.1 unnamed protein product [Lactuca saligna]

2.2e-180

79.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA G             PS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSL A+SVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFF FVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLLTETADLMLE
        VL MTLL ET D  LE
Subjt:  VLFMTLLTETADLMLE

YP_009525182.1 photosystem II CP43 chlorophyll apoprotein [Hodgsonia macrocarpa]

8.5e-180

81.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

YP_009560831.1 PsbC [Trichosanthes kirilowii]

8.5e-180

81.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

YP_009751649.1 photosystem II 43 kDa protein [Hodgsonia heteroclita]

8.5e-180

81.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

YP_009751902.1 photosystem II 43 kDa protein [Cyclanthera pedata]

1.1e-179

81.33

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGG+YDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

TrEMBL top hits

e value

%identity

Alignment

A0A346QNW2 Photosystem II CP43 reaction center protein

4.1e-180

81.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

A0A6H0EPV8 Photosystem II CP43 reaction center protein

4.1e-180

81.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

A0A6M3RTR9 Photosystem II CP43 reaction center protein

4.1e-180

81.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

A0A6M3RWB3 Photosystem II CP43 reaction center protein

4.1e-180

81.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

A0A6S7KQP6 Uncharacterized protein

1.1e-180

79.57

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA G             PS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSL A+SVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFF FVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLLTETADLMLE
        VL MTLL ET D  LE
Subjt:  VLFMTLLTETADLMLE

SwissProt top hits

e value

%identity

Alignment

A1XFV1 Photosystem II CP43 reaction center protein

2.1e-181

80.34

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA G             PS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWHILTKPFAWARRA VW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFF FVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

B1NWE6 Photosystem II CP43 reaction center protein

2.1e-181

80.84

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Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VL MT L
Subjt:  VLFMTLL

Q2QD93 Photosystem II CP43 reaction center protein

2.5e-182

81.08

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Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGAN+          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

Q2VEI0 Photosystem II CP43 reaction center protein

2.1e-181

80.34

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA G             PS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGAL+VFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFF FVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VLFMT L
Subjt:  VLFMTLL

Q68S10 Photosystem II CP43 reaction center protein

2.7e-181

80.59

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Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA G             PS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSLGALSVFGFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VL MT L
Subjt:  VLFMTLL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00280.1 photosystem II reaction center protein C

5.3e-180

79.85

Show/hide

Query:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA G             PSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICI GGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWARG------------IPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL
        SGEAYLSYSL ALSV GFIACCFVWFNNTAYP+          SQAQAFTFLVRDQRLGANV          K L++      +F GETMRFWDLR  WL
Subjt:  SGEAYLSYSLGALSVFGFIACCFVWFNNTAYPT----------SQAQAFTFLVRDQRLGANVDPL-------KDLLK------LFWGETMRFWDLRVLWL

Query:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP
        EPLRGPNGLDLS                        SLNSVGGVATEINAVNYVSPRSWL+TSHFVLGFFLFVGHLWHAGRA  AAAAGFEKGIDRDFEP
Subjt:  EPLRGPNGLDLS------------------------SLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAGFEKGIDRDFEP

Query:  VLFMTLL
        VL MT L
Subjt:  VLFMTLL

Sequences

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CDS sequence

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ATGAACCTATTCGAAGTGGCTCATTTCGTACCGGAGAAGCCCATGTATGAACAAGGATTAATTTTACTTCCTCACCTAGCTACTCTAGGTTGGGGGGTAGGTCCCGGTGG
GGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTGTTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCC
TTGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTCTAGGTGCTTTTCTTCTAGTA
TTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCCCGGGGGATCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGAGGAGAAGGATGGATTGT
TAGTGTGGACGATTTGGAAGATATAGTTGGGGGACATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCC
GCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCG
ACTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGATCCGCTCAAGGACCTACTGAAGTTATTTTGGGGAGAGACTATGCGTTT
TTGGGATCTCCGTGTTCTTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTAGACTTGAGTTCTTTAAATTCCGTGGGTGGTGTAGCTACCGAAATTAATGCAGTCAATT
ATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTTTCTGTGCAGCGGCCGCAGGA
TTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTGTTCATGACTCTCTTAACTGAGACAGCAGATCTAATGCTTGAAGTCAAAATCAATTTGATTCCACCATACAT
ATCAGGTTGA

mRNA sequence

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Protein sequence

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MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLV
FKALYFGGVYDTWARGIPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYP
TSQAQAFTFLVRDQRLGANVDPLKDLLKLFWGETMRFWDLRVLWLEPLRGPNGLDLSSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRAFCAAAAG
FEKGIDRDFEPVLFMTLLTETADLMLEVKINLIPPYISG

Sed0025365 (gene) of Chayote v1 genome