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Sed0025373 (gene) of Chayote v1 genome

Gene IDSed0025373
OrganismSechium edule (Chayote v1)
DescriptionSerine-rich protein-related
Genome locationLG12:33330129..33331006
RNA-Seq ExpressionSed0025373
SyntenySed0025373
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443918.1 PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]2.2e-3269.9Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFCLMNNHGTGF
        MA+KSGS+  K P+ AGSRKCLCSPTTHPGSFRCSFHR R K+S+  S+++     AK+NALR FL Q+IKPSSND+QRRRNF P+PSRFCLMN+HGTG 
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFCLMNNHGTGF

Query:  AVS
         VS
Subjt:  AVS

XP_022921799.1 uncharacterized protein LOC111429944 [Cucurbita moschata]7.9e-3571.43Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC
        MA+KSGS+N K  +  GSRKCLCSPTTHPGSFRCS HRNRRKVSA++S+++         ++ M AK+NALR FLQQII PSS DLQRRRNFRPKPSRFC
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC

Query:  LMNNHGTGFAVS
        LMNNHGTG AVS
Subjt:  LMNNHGTGFAVS

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]9.7e-3367.86Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC
        MATKS S NSK  +   SRKCLCSPTTHPGSFRCSFHRNRRK SA++S+++         E+ +FAK+NA+R FL  II+PSSNDLQRRRNF P+PSRFC
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC

Query:  LMNNHGTGFAVS
        LMN HGTG AVS
Subjt:  LMNNHGTGFAVS

XP_023003805.1 uncharacterized protein LOC111497277 [Cucurbita maxima]5.7e-3368.75Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC
        MATKS SANSK  +   SRKCLCSPTTHPGSFRCSFHRNRRK SA++S+++         E+ +FAK+NA+R FL  II+PSSNDLQRRRNF P+PSRFC
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC

Query:  LMNNHGTGFAVS
        LMN HGTG AVS
Subjt:  LMNNHGTGFAVS

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]5.1e-3470.54Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC
        MA+KSGS+N K  +  GSRKCLCSPTTHPGSFRCS HRNRRKVSA++S+++         ++ M AK+NALR FL QII PSS DLQRRRNFRPKPSRFC
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC

Query:  LMNNHGTGFAVS
        LMNNHGTG AVS
Subjt:  LMNNHGTGFAVS

TrEMBL top hitse value%identityAlignment
A0A1S3B8Q0 uncharacterized protein LOC1034873961.0e-3269.9Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFCLMNNHGTGF
        MA+KSGS+  K P+ AGSRKCLCSPTTHPGSFRCSFHR R K+S+  S+++     AK+NALR FL Q+IKPSSND+QRRRNF P+PSRFCLMN+HGTG 
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFCLMNNHGTGF

Query:  AVS
         VS
Subjt:  AVS

A0A5A7U6S1 Serine-rich protein-related1.0e-3269.9Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFCLMNNHGTGF
        MA+KSGS+  K P+ AGSRKCLCSPTTHPGSFRCSFHR R K+S+  S+++     AK+NALR FL Q+IKPSSND+QRRRNF P+PSRFCLMN+HGTG 
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFCLMNNHGTGF

Query:  AVS
         VS
Subjt:  AVS

A0A6J1E1K3 uncharacterized protein LOC1114299443.8e-3571.43Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC
        MA+KSGS+N K  +  GSRKCLCSPTTHPGSFRCS HRNRRKVSA++S+++         ++ M AK+NALR FLQQII PSS DLQRRRNFRPKPSRFC
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC

Query:  LMNNHGTGFAVS
        LMNNHGTG AVS
Subjt:  LMNNHGTGFAVS

A0A6J1EG01 uncharacterized protein LOC1114339804.7e-3367.86Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC
        MATKS S NSK  +   SRKCLCSPTTHPGSFRCSFHRNRRK SA++S+++         E+ +FAK+NA+R FL  II+PSSNDLQRRRNF P+PSRFC
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC

Query:  LMNNHGTGFAVS
        LMN HGTG AVS
Subjt:  LMNNHGTGFAVS

A0A6J1KSU0 uncharacterized protein LOC1114972772.7e-3368.75Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC
        MATKS SANSK  +   SRKCLCSPTTHPGSFRCSFHRNRRK SA++S+++         E+ +FAK+NA+R FL  II+PSSNDLQRRRNF P+PSRFC
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAA---------EIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFC

Query:  LMNNHGTGFAVS
        LMN HGTG AVS
Subjt:  LMNNHGTGFAVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein2.0e-0444.23Show/hide
Query:  ATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEI
        A + GS      T+     CLCSPTTHPGSFRC  HR+      K+  AA +
Subjt:  ATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEI

AT5G11090.1 serine-rich protein-related7.2e-1036.7Show/hide
Query:  KSGSANSKSPTAAG---SRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAA-----AEIAMFAKSNAL-----------RGFLQQIIKPSSNDLQRRRNFR
        KS S +   P +     SR+C+CSPTTHPGSFRCS H+N      + +A+       +   A +N+L           R  L  +I+PSS+ L+RR  ++
Subjt:  KSGSANSKSPTAAG---SRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAA-----AEIAMFAKSNAL-----------RGFLQQIIKPSSNDLQRRRNFR

Query:  PKPSRFCLM
        P+PSR  +M
Subjt:  PKPSRFCLM

AT5G20370.1 serine-rich protein-related1.0e-0837.25Show/hide
Query:  RKCLCSPTTHPGSFRCSFHR------------------NRRKVSAKASAAAEIAMFAKSNAL------------RGFLQQIIKPSSNDLQRRRNFRPKPS
        RKCLCSPTTHPGSFRCSFHR                  NR   + + +    +   A  N+L            R     + KPSS    RR  FRP+ S
Subjt:  RKCLCSPTTHPGSFRCSFHR------------------NRRKVSAKASAAAEIAMFAKSNAL------------RGFLQQIIKPSSNDLQRRRNFRPKPS

Query:  RF
        RF
Subjt:  RF

AT5G25280.1 serine-rich protein-related3.9e-0832.73Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAA-----AEIAMFAKSNAL-----------RGFLQQIIKPSSNDLQRRRNFR
        +A  S   ++        R+C+CSPTTHPGSFRCS H+N      + +A+       +   A +N+L           R  L  +I+PSS+ L+RR  + 
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAA-----AEIAMFAKSNAL-----------RGFLQQIIKPSSNDLQRRRNFR

Query:  PKPSRFCLMN
        P+ SR   M+
Subjt:  PKPSRFCLMN

AT5G25280.2 serine-rich protein-related3.9e-0832.73Show/hide
Query:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAA-----AEIAMFAKSNAL-----------RGFLQQIIKPSSNDLQRRRNFR
        +A  S   ++        R+C+CSPTTHPGSFRCS H+N      + +A+       +   A +N+L           R  L  +I+PSS+ L+RR  + 
Subjt:  MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAA-----AEIAMFAKSNAL-----------RGFLQQIIKPSSNDLQRRRNFR

Query:  PKPSRFCLMN
        P+ SR   M+
Subjt:  PKPSRFCLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACGAAATCTGGATCCGCCAATTCGAAGTCGCCGACCGCCGCCGGTTCACGGAAGTGCCTCTGTTCTCCGACCACCCACCCCGGTTCTTTCCGCTGTAGTTTTCA
CCGGAACCGCCGCAAGGTTTCCGCCAAGGCGTCGGCGGCGGCGGAGATCGCGATGTTCGCGAAATCGAATGCGTTGAGAGGATTTCTTCAGCAGATCATCAAGCCGTCGA
GTAACGATCTGCAGCGGCGGCGGAATTTCCGTCCCAAACCTTCCAGGTTTTGCTTGATGAATAATCACGGAACTGGATTCGCTGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAATCAGTTCACATAATTTCACTCCCAAATCCCACAAAAAAGTTCTTTCGAAATCTTCAATTCTCATGGCCACGAAATCTGGATCCGCCAATTCGAAGTCGCCGACC
GCCGCCGGTTCACGGAAGTGCCTCTGTTCTCCGACCACCCACCCCGGTTCTTTCCGCTGTAGTTTTCACCGGAACCGCCGCAAGGTTTCCGCCAAGGCGTCGGCGGCGGC
GGAGATCGCGATGTTCGCGAAATCGAATGCGTTGAGAGGATTTCTTCAGCAGATCATCAAGCCGTCGAGTAACGATCTGCAGCGGCGGCGGAATTTCCGTCCCAAACCTT
CCAGGTTTTGCTTGATGAATAATCACGGAACTGGATTCGCTGTTTCTTGAATCGATTTTTGTTTCCTTAGTTCGCGATGCGCTTTCGATCCTCTTCGCTGTAGATATTGC
GTTTGTGTACAGATTCAAGAGGACATTGCATTGATTCGATCTTGATTTTAGGTTTTTTCCTCTGTTTTTTTTGGCACTGATCCATAACATCTCGAAATGCGTTGAGAGGA
TTAACGATCTGCAACGGCGGAGGAATTTTTTGTCCTAAGCCTTCCAGGTTTTGCTTGATGAATGATCATGGAACTGGATTCGATGTTTCTTGAATCGATTTTAGTTTTCT
TAGTTCTTGTGATGTTCTTTCGATCCTCTTCGCTGAATTTTCTGTGTAGATATAGCGTTTGTGTATTAATTCGAGAGTACATTGTATTGATTCGATGGAGTCCTTTCTTG
AATTAGAATTAGATTTTTGTTCTCTTTTTTTCCACAGTTTTTGGCACTGATTCTTCGAAATTGCTTGATGAAATGTTTTGTTTATCAAGAACTGGCACTATTCTTCGG
Protein sequenceShow/hide protein sequence
MATKSGSANSKSPTAAGSRKCLCSPTTHPGSFRCSFHRNRRKVSAKASAAAEIAMFAKSNALRGFLQQIIKPSSNDLQRRRNFRPKPSRFCLMNNHGTGFAVS