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Sed0025387 (gene) of Chayote v1 genome

Gene IDSed0025387
OrganismSechium edule (Chayote v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG01:57903639..57910623
RNA-Seq ExpressionSed0025387
SyntenySed0025387
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038349.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.3e-0830.77Show/hide
Query:  QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM------EKSRKASESRSK
        QA PTPR  A        SR +ELER V I G+I + + P  +K +  +  RFS  I V VR  F I    +  V  E+ ++      E+SR    +R K
Subjt:  QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM------EKSRKASESRSK

Query:  VRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEGLSQND
          +NH++G+KSF   L++ Y         +  +ELFRETH + G  + S+  E+A+N+MLE+Q + T   S P+ E EI   VLG R    K  GLS   
Subjt:  VRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEGLSQND

Query:  REILVQLREENERRRKEKAGRLEEEACRREEETRHQEEETRSQEEETRRQEEETRRVHKMFE--EGQRRSNEKIA----NLEALIQSMMHNQGGSQEGP
                       K KA R           T      + S  + T ++ E   ++H+  E  E Q R+++ +A    +++ +I+ +   Q GS   P
Subjt:  REILVQLREENERRRKEKAGRLEEEACRREEETRHQEEETRSQEEETRRQEEETRRVHKMFE--EGQRRSNEKIA----NLEALIQSMMHNQGGSQEGP

KAA0054540.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.9e-0828.34Show/hide
Query:  QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKD-------------------
        Q  PTPR  A        SR +ELER V I G+I + + P  +K +  +  RFS  I V +R  FP+R   +  V  E+ +                   
Subjt:  QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKD-------------------

Query:  ---------------------------------------MEKSRKASESRSKVRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWP
                                               +E+SR    +R K  +NH++G+KSF   L++ Y         +  +ELFRETH + G  + 
Subjt:  ---------------------------------------MEKSRKASESRSKVRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWP

Query:  SKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEG
        S+  E+A+N+ML++Q + T   S P+ E EI   VLG R    KG G
Subjt:  SKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEG

KAA0057011.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.1e-1231.98Show/hide
Query:  NDAMRIFEEQVNVNVIA--------------QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIR-
        ND    FE+ ++ N+                QA PTPR  A        SR +ELER V I G+I + + P  +K +  +  RFS  I V VR  FP+R 
Subjt:  NDAMRIFEEQVNVNVIA--------------QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIR-

Query:  --------IPTY------------------EAVAEEHKDMEKSRKASESRSKVRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWP
                + T+                  EA A     +E+SR    +R K  +NH++G+KSF   L++ Y         +  +ELFRETH +  + + 
Subjt:  --------IPTY------------------EAVAEEHKDMEKSRKASESRSKVRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWP

Query:  SKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEG
        S+  E+A+N+MLE+Q + T   S P+ E EI   VLG R    KG G
Subjt:  SKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEG

TYK29140.1 uncharacterized protein E5676_scaffold120G002850 [Cucumis melo var. makuwa]1.6e-1132.22Show/hide
Query:  EQVNVNVIAQAPPTPRAAAMNYRTRGI---SRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKD-----ME
        EQ N   I  + P+        R RG+    R+IEL++ V+ +GKI+I ++ +  K V     + +L I   VR   P+    ++AV    ++     +E
Subjt:  EQVNVNVIAQAPPTPRAAAMNYRTRGI---SRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKD-----ME

Query:  KSRKASE-SRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIE-AEIRAHVLGTRS---
        K R+ ++ SRS V+ NH TGAKSF  V   L+K     + EIE+F ETH++E +GW + + ++AY +M  +  EST +    I  A+    VLG+RS   
Subjt:  KSRKASE-SRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIE-AEIRAHVLGTRS---

Query:  -DSVKGEGLSQN-------DREILVQLREENERRRKEKA
         +   GE L  N       ++  +  L+E NE+   E A
Subjt:  -DSVKGEGLSQN-------DREILVQLREENERRRKEKA

XP_019081922.1 PREDICTED: uncharacterized protein LOC100261419 isoform X1 [Vitis vinifera]4.1e-0734.75Show/hide
Query:  MEKSRKA----SESRSKVRHNHTTGAKSFTYVLEKNYL--------GEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSH-PMIEAEIRAHVL
        +EK +K     SE+R K+  NH  G+K F +  + N +        GE+ELFR THY E KGW +   +  Y +M ++QE+ST     P+ + EI   VL
Subjt:  MEKSRKA----SESRSKVRHNHTTGAKSFTYVLEKNYL--------GEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSH-PMIEAEIRAHVL

Query:  GTRSDSVKGEGL-SQNDREILVQLREENERRRKEKAGRLEE
        G RS  ++G G  S+  R    +  +E   R +++  +LEE
Subjt:  GTRSDSVKGEGL-SQNDREILVQLREENERRRKEKAGRLEE

TrEMBL top hitse value%identityAlignment
A0A5A7T3V0 CACTA en-spm transposon protein1.7e-0628.14Show/hide
Query:  YRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM-----------------------EKSRKAS
        Y   G  R+IEL++ V  +GK++I +  +  K V       +L I   VR   P+     +AV  + K++                       +K     
Subjt:  YRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM-----------------------EKSRKAS

Query:  ESRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIEAEIRAHVLGTRS----DSVKGEG
        +SRS V+ NH T AKSF  V   L+K     + E+E+F ETH++E +GW + + + AY  + E  E    +       EI   VLG+RS    +   GE 
Subjt:  ESRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIEAEIRAHVLGTRS----DSVKGEG

Query:  LSQN-------DREILVQLREENERRRKEKA
        L  N       ++  +  L+E NE+   E A
Subjt:  LSQN-------DREILVQLREENERRRKEKA

A0A5A7TAG5 CACTA en-spm transposon protein6.2e-0930.77Show/hide
Query:  QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM------EKSRKASESRSK
        QA PTPR  A        SR +ELER V I G+I + + P  +K +  +  RFS  I V VR  F I    +  V  E+ ++      E+SR    +R K
Subjt:  QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM------EKSRKASESRSK

Query:  VRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEGLSQND
          +NH++G+KSF   L++ Y         +  +ELFRETH + G  + S+  E+A+N+MLE+Q + T   S P+ E EI   VLG R    K  GLS   
Subjt:  VRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEGLSQND

Query:  REILVQLREENERRRKEKAGRLEEEACRREEETRHQEEETRSQEEETRRQEEETRRVHKMFE--EGQRRSNEKIA----NLEALIQSMMHNQGGSQEGP
                       K KA R           T      + S  + T ++ E   ++H+  E  E Q R+++ +A    +++ +I+ +   Q GS   P
Subjt:  REILVQLREENERRRKEKAGRLEEEACRREEETRHQEEETRSQEEETRRQEEETRRVHKMFE--EGQRRSNEKIA----NLEALIQSMMHNQGGSQEGP

A0A5A7UU28 CACTA en-spm transposon protein5.4e-1331.98Show/hide
Query:  NDAMRIFEEQVNVNVIA--------------QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIR-
        ND    FE+ ++ N+                QA PTPR  A        SR +ELER V I G+I + + P  +K +  +  RFS  I V VR  FP+R 
Subjt:  NDAMRIFEEQVNVNVIA--------------QAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIR-

Query:  --------IPTY------------------EAVAEEHKDMEKSRKASESRSKVRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWP
                + T+                  EA A     +E+SR    +R K  +NH++G+KSF   L++ Y         +  +ELFRETH +  + + 
Subjt:  --------IPTY------------------EAVAEEHKDMEKSRKASESRSKVRHNHTTGAKSFTYVLEKNY---------LGEIELFRETHYKEGKGWP

Query:  SKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEG
        S+  E+A+N+MLE+Q + T   S P+ E EI   VLG R    KG G
Subjt:  SKETEEAYNKMLEMQEEST-TSSHPMIEAEIRAHVLGTRSDSVKGEG

A0A5D3B974 DUF4216 domain-containing protein1.7e-0628.14Show/hide
Query:  YRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM-----------------------EKSRKAS
        Y   G  R+IEL++ V  +GK++I +  +  K V       +L I   VR   P+     +AV  + K++                       +K     
Subjt:  YRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDM-----------------------EKSRKAS

Query:  ESRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIEAEIRAHVLGTRS----DSVKGEG
        +SRS V+ NH T AKSF  V   L+K     + E+E+F ETH++E +GW + + + AY  + E  E    +       EI   VLG+RS    +   GE 
Subjt:  ESRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIEAEIRAHVLGTRS----DSVKGEG

Query:  LSQN-------DREILVQLREENERRRKEKA
        L  N       ++  +  L+E NE+   E A
Subjt:  LSQN-------DREILVQLREENERRRKEKA

A0A5D3E0V3 Uncharacterized protein7.8e-1232.22Show/hide
Query:  EQVNVNVIAQAPPTPRAAAMNYRTRGI---SRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKD-----ME
        EQ N   I  + P+        R RG+    R+IEL++ V+ +GKI+I ++ +  K V     + +L I   VR   P+    ++AV    ++     +E
Subjt:  EQVNVNVIAQAPPTPRAAAMNYRTRGI---SRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKD-----ME

Query:  KSRKASE-SRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIE-AEIRAHVLGTRS---
        K R+ ++ SRS V+ NH TGAKSF  V   L+K     + EIE+F ETH++E +GW + + ++AY +M  +  EST +    I  A+    VLG+RS   
Subjt:  KSRKASE-SRSKVRHNHTTGAKSFTYV---LEKNY---LGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIE-AEIRAHVLGTRS---

Query:  -DSVKGEGLSQN-------DREILVQLREENERRRKEKA
         +   GE L  N       ++  +  L+E NE+   E A
Subjt:  -DSVKGEGLSQN-------DREILVQLREENERRRKEKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGACGACAAGGTAACGATGCTATGCGTATTTTTGAAGAACAAGTGAATGTGAATGTTATAGCGCAAGCTCCTCCTACTCCTCGTGCAGCTGCTATGAATTATAG
GACTAGAGGAATCTCGAGGAGTATTGAGTTGGAACGCATAGTTCGAATATATGGAAAAATTCGAATAATAGTACACCCGCAACATAAGAAACATGTATGCGATAATTTTG
CACGATTCAGTCTTCAGATTGAGGTTCTTGTGAGGGCGATATTTCCAATTCGAATCCCAACATACGAGGCAGTGGCCGAAGAGCATAAGGACATGGAAAAATCTCGAAAA
GCTAGTGAATCTCGCAGCAAAGTGCGACACAATCATACAACTGGTGCAAAAAGCTTCACATACGTACTAGAGAAAAATTATTTGGGAGAGATTGAGTTGTTCCGTGAAAC
TCACTATAAAGAAGGAAAAGGATGGCCTTCCAAAGAAACTGAAGAGGCTTATAATAAAATGTTGGAGATGCAAGAAGAGTCTACAACAAGTTCTCATCCAATGATAGAAG
CTGAGATACGTGCACATGTGTTGGGCACTCGATCAGATAGTGTTAAAGGAGAGGGATTATCTCAAAATGATCGAGAAATACTAGTTCAACTAAGAGAAGAAAATGAACGA
CGTCGAAAAGAAAAGGCAGGTCGTTTAGAAGAAGAGGCATGTCGCCGAGAAGAAGAGACACGTCATCAAGAAGAAGAGACACGGAGTCAAGAAGAAGAGACACGACGTCA
AGAAGAAGAGACACGTCGAGTACATAAAATGTTTGAAGAGGGACAGAGAAGATCGAACGAGAAGATAGCAAATCTTGAGGCTTTGATCCAATCAATGATGCATAACCAAG
GTGGATCACAAGAAGGACCATCTAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGGACGACAAGGTAACGATGCTATGCGTATTTTTGAAGAACAAGTGAATGTGAATGTTATAGCGCAAGCTCCTCCTACTCCTCGTGCAGCTGCTATGAATTATAG
GACTAGAGGAATCTCGAGGAGTATTGAGTTGGAACGCATAGTTCGAATATATGGAAAAATTCGAATAATAGTACACCCGCAACATAAGAAACATGTATGCGATAATTTTG
CACGATTCAGTCTTCAGATTGAGGTTCTTGTGAGGGCGATATTTCCAATTCGAATCCCAACATACGAGGCAGTGGCCGAAGAGCATAAGGACATGGAAAAATCTCGAAAA
GCTAGTGAATCTCGCAGCAAAGTGCGACACAATCATACAACTGGTGCAAAAAGCTTCACATACGTACTAGAGAAAAATTATTTGGGAGAGATTGAGTTGTTCCGTGAAAC
TCACTATAAAGAAGGAAAAGGATGGCCTTCCAAAGAAACTGAAGAGGCTTATAATAAAATGTTGGAGATGCAAGAAGAGTCTACAACAAGTTCTCATCCAATGATAGAAG
CTGAGATACGTGCACATGTGTTGGGCACTCGATCAGATAGTGTTAAAGGAGAGGGATTATCTCAAAATGATCGAGAAATACTAGTTCAACTAAGAGAAGAAAATGAACGA
CGTCGAAAAGAAAAGGCAGGTCGTTTAGAAGAAGAGGCATGTCGCCGAGAAGAAGAGACACGTCATCAAGAAGAAGAGACACGGAGTCAAGAAGAAGAGACACGACGTCA
AGAAGAAGAGACACGTCGAGTACATAAAATGTTTGAAGAGGGACAGAGAAGATCGAACGAGAAGATAGCAAATCTTGAGGCTTTGATCCAATCAATGATGCATAACCAAG
GTGGATCACAAGAAGGACCATCTAGCTAG
Protein sequenceShow/hide protein sequence
MYGRQGNDAMRIFEEQVNVNVIAQAPPTPRAAAMNYRTRGISRSIELERIVRIYGKIRIIVHPQHKKHVCDNFARFSLQIEVLVRAIFPIRIPTYEAVAEEHKDMEKSRK
ASESRSKVRHNHTTGAKSFTYVLEKNYLGEIELFRETHYKEGKGWPSKETEEAYNKMLEMQEESTTSSHPMIEAEIRAHVLGTRSDSVKGEGLSQNDREILVQLREENER
RRKEKAGRLEEEACRREEETRHQEEETRSQEEETRRQEEETRRVHKMFEEGQRRSNEKIANLEALIQSMMHNQGGSQEGPSS