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Sed0025399 (gene) of Chayote v1 genome

Gene IDSed0025399
OrganismSechium edule (Chayote v1)
DescriptionProtein YLS9
Genome locationLG02:41952027..41952728
RNA-Seq ExpressionSed0025399
SyntenySed0025399
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043818.1 protein YLS9 [Cucumis melo var. makuwa]3.3e-8167.73Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        M +T  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYKIS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKV-QENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-
        RERRRKV  +NE  YYF           Q KKK    NV+LLRRN G+ENELLSG +SP +  +EYE+R R+LQLE  KYL+ + ++NLT+ G GDGGR 
Subjt:  RERRRKV-QENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-

Query:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKE
           RS T +CR C+ A+E G VAAGFHCCA D VT GFRS AGPIARPV++
Subjt:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKE

KAG6580743.1 hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia]6.3e-8066.01Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMN-STKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        MVET GGVSFP++FHDGE+D  IGSV+VSSS + KNFQS LSKMIGISSHQFTVYLAEYKIS++ STKIRRRIPITGKVNFGAIS EK+ FFLVVLKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMN-STKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKVQE-NENGYYFEQSKK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGG--
        RERRRKV + NE+ YY   + K              +NV+LLRRNAG+EN++LSG ISPA+  ++YE+R R+LQLE   Y   VGL NLT GG GDGG  
Subjt:  RERRRKVQE-NENGYYFEQSKK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGG--

Query:  --RRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD
           +S T  CR CL A+E+G  A GFHCCA D VT GFRS AGPIARP+KES+
Subjt:  --RRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

KAG6596614.1 hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia]7.2e-8470.4Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNST-KIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        MVET G VSFPV+FHDGERD+D+GSV VSSS E KNFQSILSKMIGISSHQFTVYLAEYKISM+ST KIRRRIPITGKVNFGAI+ EK+CFFLVVLKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNST-KIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKVQENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSG--DGGR
        RERRRK+Q NE+ Y              SKKK    NV+LL+RN G+ENELL G ISPA   FEY++RF +LQLE  KYL+ +G  NL +GG G  +G  
Subjt:  RERRRKVQENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSG--DGGR

Query:  RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD
        R  TAVC  CL A+E+G VAAGFHCCA+D VTTGFRS AGPIARPVKESD
Subjt:  RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

KAG7028150.1 hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-8370Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNST-KIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        MVET G VSFPV+FHDGERD+D+GSV VSSS E KNFQSILSKMIGISSHQFTVYLAEYKISM+ST KIRRRIPITGKVNFGAI+ EK+CFFLVVLKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNST-KIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKVQENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSG--DGGR
        RERRRK+Q NE+ Y F            SKKK    NV+LL+RN G+ENELL G ISP    FEY++RF +LQLE  KYL+ +G  NL +GG G  +G  
Subjt:  RERRRKVQENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSG--DGGR

Query:  RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD
        R  TAVC  CL A+E+G VAAGFHCCA+D VT GFRS AGPIARPVKESD
Subjt:  RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

XP_031739121.1 uncharacterized protein LOC116402855 [Cucumis sativus]1.1e-8167.19Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        M ET  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYKIS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKV-QENENGYYFEQSKK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-
        RERRRKV  +NE  YYF  + K              +NV+LLRRN G+ENELL+G ISP +  +EYE R R+LQLE+ KYL+ + +SNL +G  GDGGR 
Subjt:  RERRRKV-QENENGYYFEQSKK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-

Query:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD
           RS   +C  CL A+E G VAAGFHCCA D VT GFRS AGPIARPVKES+
Subjt:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

TrEMBL top hitse value%identityAlignment
A0A0A0LER6 Uncharacterized protein5.5e-8267.19Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        M ET  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYKIS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKV-QENENGYYFEQSKK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-
        RERRRKV  +NE  YYF  + K              +NV+LLRRN G+ENELL+G ISP +  +EYE R R+LQLE+ KYL+ + +SNL +G  GDGGR 
Subjt:  RERRRKV-QENENGYYFEQSKK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-

Query:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD
           RS   +C  CL A+E G VAAGFHCCA D VT GFRS AGPIARPVKES+
Subjt:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

A0A540NAB7 Uncharacterized protein1.5e-4748.24Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRR
        M+E   GVSFPV+F DGE ++DIG +VV   ++   F S+LS+ IGI   QFTV+L       +S + R+RIPITGKVNF AIS EK+CFFLV LKRSRR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRR

Query:  ERRRKVQENENGYYFEQSKK---------------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSG
        ERRRK    +  ++ +  ++                     +NV+LL+R  G+E E ++GL  P  G  EYE R R LQ+E  +YL+ +GL      G G
Subjt:  ERRRKVQENENGYYFEQSKK---------------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSG

Query:  DG-GRRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD
         G GRRSG  VC  C +A E G    GFH CAYD VT GFRS AGPI+RPVK SD
Subjt:  DG-GRRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

A0A5A7TLT1 Protein YLS91.6e-8167.73Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        M +T  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYKIS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKV-QENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-
        RERRRKV  +NE  YYF           Q KKK    NV+LLRRN G+ENELLSG +SP +  +EYE+R R+LQLE  KYL+ + ++NLT+ G GDGGR 
Subjt:  RERRRKV-QENENGYYF----------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGR-

Query:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKE
           RS T +CR C+ A+E G VAAGFHCCA D VT GFRS AGPIARPV++
Subjt:  ---RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKE

A0A6A1UKZ8 Uncharacterized protein9.2e-5349.4Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRR
        MVE   GVSFPV+F DGER+S+IG+V+VS S++ K+FQSI+S+ IGIS HQF+VYLA      + ++  R+IPITGK NFG I  +K CFFLVVLKRSRR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRR

Query:  ERRRKVQ--ENENGYYFEQSK--------KKNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGG------RR
        ER+R+ Q    E+ YY              +NV+LLRRN  + ++   G  SP +    YEKR R LQ+E  +YL  +GL  L +G   +GG       R
Subjt:  ERRRKVQ--ENENGYYFEQSK--------KKNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGG------RR

Query:  SGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD
        +G   C  C++A+  G    GFH C YD VT+GFRS AGPIARPVK S+
Subjt:  SGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

A0A6P9E6Z6 uncharacterized protein LOC1183479051.9e-5351.98Show/hide
Query:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLA-EYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR
        MV    GVSFPV+F DGER++ IG VVV  S+  KNFQSILS+ IGIS HQF+VYLA +Y+     ++  R+IPITGKVNF AIS EK CFFLV+LKRSR
Subjt:  MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLA-EYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSR

Query:  RERRRKVQE--NENGYY------FEQSKKK---NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTV-----GGSGDGG-
        RER+R+ ++   E  YY       ++  KK   NV+LLRR+AG E +   G +SP +    YEKR + LQ+E  +YL+ +GLS L++     GG G+ G 
Subjt:  RERRRKVQE--NENGYY------FEQSKKK---NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTV-----GGSGDGG-

Query:  RRSGT--AVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKES
         R+G     C  C++A++ G    GFH C YDTVT GFRS AGPIARPVK S
Subjt:  RRSGT--AVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAACCGGCGGCGGCGTTTCGTTTCCGGTCATTTTCCACGACGGCGAACGAGATTCCGACATCGGCTCCGTCGTCGTGTCATCTTCCATGGAGTTGAAGAATTT
TCAGTCGATTTTGAGCAAGATGATCGGAATCTCTTCGCATCAGTTCACGGTTTACCTAGCGGAGTATAAGATCTCTATGAATTCGACGAAGATCCGGCGGAGGATTCCTA
TCACCGGGAAGGTCAACTTCGGAGCGATCTCCGGCGAAAAGAGCTGTTTCTTTCTCGTGGTTTTGAAGCGGTCGAGACGCGAGCGGAGGCGGAAGGTACAAGAAAACGAA
AACGGATACTATTTTGAACAATCGAAGAAGAAGAATGTGGTGTTGTTGAGACGAAACGCCGGCGTTGAAAACGAATTGCTCTCCGGCTTAATCTCGCCGGCAATTGGCGG
ATTTGAATACGAAAAGCGATTTCGGAGGCTGCAATTGGAGGAGGCGAAATACTTGCTCGGCGTAGGGTTAAGCAATCTGACGGTTGGCGGTAGCGGAGACGGCGGCCGGA
GATCGGGAACGGCGGTCTGTAGGCACTGCCTGAAGGCGGAAGAGAGCGGCGTGGTGGCGGCCGGCTTTCACTGCTGCGCCTACGACACCGTGACGACCGGGTTCCGGTCT
CGGGCCGGTCCGATTGCCCGGCCCGTAAAAGAATCGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAACCGGCGGCGGCGTTTCGTTTCCGGTCATTTTCCACGACGGCGAACGAGATTCCGACATCGGCTCCGTCGTCGTGTCATCTTCCATGGAGTTGAAGAATTT
TCAGTCGATTTTGAGCAAGATGATCGGAATCTCTTCGCATCAGTTCACGGTTTACCTAGCGGAGTATAAGATCTCTATGAATTCGACGAAGATCCGGCGGAGGATTCCTA
TCACCGGGAAGGTCAACTTCGGAGCGATCTCCGGCGAAAAGAGCTGTTTCTTTCTCGTGGTTTTGAAGCGGTCGAGACGCGAGCGGAGGCGGAAGGTACAAGAAAACGAA
AACGGATACTATTTTGAACAATCGAAGAAGAAGAATGTGGTGTTGTTGAGACGAAACGCCGGCGTTGAAAACGAATTGCTCTCCGGCTTAATCTCGCCGGCAATTGGCGG
ATTTGAATACGAAAAGCGATTTCGGAGGCTGCAATTGGAGGAGGCGAAATACTTGCTCGGCGTAGGGTTAAGCAATCTGACGGTTGGCGGTAGCGGAGACGGCGGCCGGA
GATCGGGAACGGCGGTCTGTAGGCACTGCCTGAAGGCGGAAGAGAGCGGCGTGGTGGCGGCCGGCTTTCACTGCTGCGCCTACGACACCGTGACGACCGGGTTCCGGTCT
CGGGCCGGTCCGATTGCCCGGCCCGTAAAAGAATCGGATTAA
Protein sequenceShow/hide protein sequence
MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQENE
NGYYFEQSKKKNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGRRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRS
RAGPIARPVKESD