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Sed0025401 (gene) of Chayote v1 genome

Gene IDSed0025401
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationLG08:34924406..34925169
RNA-Seq ExpressionSed0025401
SyntenySed0025401
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036085.1 CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa]4.7e-3480Show/hide
Query:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        MG LI RVA +LLCI  LALQPEGT+GLTNIDLALRWDK  IP F+SFKF KD SVEDDW G  AFAPAPS G DPT+LNKRRIRRGSDPIHNKC
Subjt:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

KAG6584463.1 hypothetical protein SDJN03_20395, partial [Cucurbita argyrosperma subsp. sororia]8.3e-3178.82Show/hide
Query:  ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        +LLC+  L LQPEGTSGL+NIDLALRWDK  IP FNSFKF K+ SVEDDW    AFAPAP  GFDPTRLNKRRIRRGSDPIHNKC
Subjt:  ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

KAG6607448.1 E3 ubiquitin-protein ligase MARCHF9, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2876.34Show/hide
Query:  VLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        VL  +VA +LLCIGILALQ +GT+GLTNI LALRWDK +IP  NSFK      V+DDWRG  AFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
Subjt:  VLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

KAG7037105.1 hypothetical protein SDJN02_00726, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-2478.08Show/hide
Query:  EGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        +GT+GLTNI LALRWDK +IP  NSFK      V+DDWRG  AFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
Subjt:  EGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

KGN64003.1 hypothetical protein Csa_013092 [Cucumis sativus]1.4e-3378.95Show/hide
Query:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        MG LI RV  +LLCI  LALQPEGT+GLTNIDLALRWDK  IP FNSFKF KDVSVEDDW    AFAPAPS G DPT+LNKRR+RRGSDPIHNKC
Subjt:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

TrEMBL top hitse value%identityAlignment
A0A0A0LQI0 Uncharacterized protein6.6e-3478.95Show/hide
Query:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        MG LI RV  +LLCI  LALQPEGT+GLTNIDLALRWDK  IP FNSFKF KDVSVEDDW    AFAPAPS G DPT+LNKRR+RRGSDPIHNKC
Subjt:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

A0A2P6P2N1 Uncharacterized protein2.1e-1957.89Show/hide
Query:  MGVLIQRVAILL-CIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        MG L  + AILL CIG LALQPE  SGL ++DLALRWDK    F NS    K V+VE D +   + APAP+M FDP++ NKR +R+GSDPIHN+C
Subjt:  MGVLIQRVAILL-CIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

A0A314XM06 Uncharacterized protein1.6e-1956.84Show/hide
Query:  MGVLIQRVAIL-LCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        MG L  R A+L +CIG LALQPE  SGL ++DLALRWDK  + F  S    K V+VE D +   + APAPSM FDP + NKR++R+GSDPIHN+C
Subjt:  MGVLIQRVAIL-LCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

A0A5D3BHX9 CLAVATA3/ESR (CLE)-related protein 452.3e-3480Show/hide
Query:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        MG LI RVA +LLCI  LALQPEGT+GLTNIDLALRWDK  IP F+SFKF KD SVEDDW G  AFAPAPS G DPT+LNKRRIRRGSDPIHNKC
Subjt:  MGVLIQRVA-ILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

M5WYZ5 Uncharacterized protein1.6e-1956.84Show/hide
Query:  MGVLIQRVAIL-LCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC
        MG L  R A+L +CIG LALQPE  SGL ++DLALRWDK  + F  S    K V+VE D +   + APAPSM FDP + NKR++R+GSDPIHN+C
Subjt:  MGVLIQRVAIL-LCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTTTTGATTCAAAGGGTGGCCATACTTCTCTGCATTGGGATTTTGGCTCTTCAACCAGAAGGAACCAGTGGGCTGACAAACATTGATCTAGCACTCAGATGGGA
TAAACCAGACATTCCTTTTTTTAATAGCTTCAAGTTTCAGAAGGATGTATCAGTAGAAGATGATTGGCGGGGAGCACCAGCTTTTGCACCGGCACCATCGATGGGTTTCG
ATCCTACTCGATTGAATAAAAGAAGGATTCGAAGAGGATCTGATCCCATTCACAACAAATGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTAAGCCTTGGCTCTGCATATATCACAGACATATCCTTATCCTCCAACTACTTCTCATCCTCTTCTTACTGAAGTCTGAACTCAGATACTTTAATCCTTCAGCTAGTTT
CAAGTAATAATGGGGGTTTTGATTCAAAGGGTGGCCATACTTCTCTGCATTGGGATTTTGGCTCTTCAACCAGAAGGAACCAGTGGGCTGACAAACATTGATCTAGCACT
CAGATGGGATAAACCAGACATTCCTTTTTTTAATAGCTTCAAGTTTCAGAAGGATGTATCAGTAGAAGATGATTGGCGGGGAGCACCAGCTTTTGCACCGGCACCATCGA
TGGGTTTCGATCCTACTCGATTGAATAAAAGAAGGATTCGAAGAGGATCTGATCCCATTCACAACAAATGTTGAGATGAGAAGAAATGGAGAAGGTACAAAGAAGCTTCA
TGTTGGTTTGTTTTTCAAGAAAAATAGAGTGGTGGGAAGCCCTGTTGATGAAAAAATGAAATCCCTGGTAGTTCATCAAAGATTGTTGATAGCTTTCTTTTAGAGTGGAA
GGTTGTATCTATTTGGGTAAGTGGCTTCAGTGCTGTACAAACTCAAGCTCTAACAAAACAAACAGCTTTATTTGGATGTAAGAGAAAGAAAGAAGGTTTCTACTGTCATA
CAAATAGATTGCTCTGTAGAAAAATGCAGTCCATGTTCTCTAAATATATTCTTTACCAAGATTTATTTTTTCAAGTTTTTAAGTTCATCCCTACTGTTACCCGA
Protein sequenceShow/hide protein sequence
MGVLIQRVAILLCIGILALQPEGTSGLTNIDLALRWDKPDIPFFNSFKFQKDVSVEDDWRGAPAFAPAPSMGFDPTRLNKRRIRRGSDPIHNKC