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Sed0025411 (gene) of Chayote v1 genome

Gene IDSed0025411
OrganismSechium edule (Chayote v1)
DescriptionB box-type domain-containing protein
Genome locationLG05:41075145..41076871
RNA-Seq ExpressionSed0025411
SyntenySed0025411
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042428.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]1.7e-4671.22Show/hide
Query:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT
        MC+GV EGN            RGGCRQ    +KGD   A V+MCELC+S ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILC+ CQNLTQKYLMGT
Subjt:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT

Query:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL
        STEVLLPTI+ CT+AN C NNG L+ C S M KRPFLFL
Subjt:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL

KAG6570870.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4374.62Show/hide
Query:  MCKGVGE-GNRGGCRQFSGAEK-GDTAE--VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIV
        MC+GV E  + GGCR+FS AEK GD+AE  VVMCELCDS ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILCN CQNLT KYLMGTST+VLLPTIV
Subjt:  MCKGVGE-GNRGGCRQFSGAEK-GDTAE--VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIV

Query:  TCTE-ANQCN-NGGLDNCSSTMFKRPFLFL
        TC +  N CN N  L  C S   K P LFL
Subjt:  TCTE-ANQCN-NGGLDNCSSTMFKRPFLFL

KGN63276.1 hypothetical protein Csa_022167 [Cucumis sativus]5.8e-4775.19Show/hide
Query:  MCKGVGEGNRG------GCRQFSGAEKG--DTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLL
        MC+GV EGN G      GCRQ    +KG    A VVMCELC+S ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILCN CQNLTQKYLMGTSTEVLL
Subjt:  MCKGVGEGNRG------GCRQFSGAEKG--DTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLL

Query:  PTIVTCTEANQCNNGGLDN-CSSTMFKRPFLFL
        PTI+ C EAN CNN G  N C S MFKRPFLFL
Subjt:  PTIVTCTEANQCNNGGLDN-CSSTMFKRPFLFL

TYK13446.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]1.7e-4671.22Show/hide
Query:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT
        MC+GV EGN            RGGCRQ    +KGD   A V+MCELC+S ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILC+ CQNLTQKYLMGT
Subjt:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT

Query:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL
        STEVLLPTI+ CT+AN C NNG L+ C S M KRPFLFL
Subjt:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL

XP_023512381.1 B-box domain protein 31-like [Cucurbita pepo subsp. pepo]4.3e-4273.08Show/hide
Query:  MCKGVGE-GNRGGCRQFSGAEK-GDTAE--VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIV
        MC+GV E  + GGCR+FS AEK GD+AE  V+MCELCDS ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILCN CQ LT KYLMGTST+VLLPTIV
Subjt:  MCKGVGE-GNRGGCRQFSGAEK-GDTAE--VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIV

Query:  TCTE-ANQCN-NGGLDNCSSTMFKRPFLFL
        TC +  N CN N  L  C S   K P LFL
Subjt:  TCTE-ANQCN-NGGLDNCSSTMFKRPFLFL

TrEMBL top hitse value%identityAlignment
A0A0A0LTB0 B box-type domain-containing protein2.8e-4775.19Show/hide
Query:  MCKGVGEGNRG------GCRQFSGAEKG--DTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLL
        MC+GV EGN G      GCRQ    +KG    A VVMCELC+S ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILCN CQNLTQKYLMGTSTEVLL
Subjt:  MCKGVGEGNRG------GCRQFSGAEKG--DTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLL

Query:  PTIVTCTEANQCNNGGLDN-CSSTMFKRPFLFL
        PTI+ C EAN CNN G  N C S MFKRPFLFL
Subjt:  PTIVTCTEANQCNNGGLDN-CSSTMFKRPFLFL

A0A5A7TI11 Zinc finger protein CONSTANS-LIKE 148.1e-4771.22Show/hide
Query:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT
        MC+GV EGN            RGGCRQ    +KGD   A V+MCELC+S ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILC+ CQNLTQKYLMGT
Subjt:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT

Query:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL
        STEVLLPTI+ CT+AN C NNG L+ C S M KRPFLFL
Subjt:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL

A0A5D3CSP7 Zinc finger protein CONSTANS-LIKE 148.1e-4771.22Show/hide
Query:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT
        MC+GV EGN            RGGCRQ    +KGD   A V+MCELC+S ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILC+ CQNLTQKYLMGT
Subjt:  MCKGVGEGN------------RGGCRQFSGAEKGD--TAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT

Query:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL
        STEVLLPTI+ CT+AN C NNG L+ C S M KRPFLFL
Subjt:  STEVLLPTIVTCTEANQC-NNGGLDNCSSTMFKRPFLFL

A0A5N6RAT0 B box-type domain-containing protein2.7e-3460Show/hide
Query:  MCKGVGEGNRGG-CRQFSGAEKGDTAEV-----VMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPT
        MCKG+GEG  GG CRQ    +   + +      V CELC S ASLYCQADDA+LCRKCDK VHGANFLA RHIRC LCN CQNLTQ+YL+G S EV+LPT
Subjt:  MCKGVGEGNRGG-CRQFSGAEKGDTAEV-----VMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPT

Query:  IVTCTEANQCNNGGLDNCSSTMFKRPFLFL
        +V+ TE ++C N  ++  S +  K PFLFL
Subjt:  IVTCTEANQCNNGGLDNCSSTMFKRPFLFL

A0A6J1JGF8 B-box domain protein 30-like4.6e-4273.08Show/hide
Query:  MCKGVGE-GNRGGCRQFSGAEK-GDTAE--VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIV
        MC+GV E  + GGCR FS AEK GD+AE  VVMCELC+S ASLYCQADDAYLCRKCDK VHGANFLALRHIRCILC+ CQNLT KYLMGTST+VLLPTIV
Subjt:  MCKGVGE-GNRGGCRQFSGAEK-GDTAE--VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIV

Query:  TCTE-ANQCN-NGGLDNCSSTMFKRPFLFL
        TC +  N CN N  L+ C S   K P LFL
Subjt:  TCTE-ANQCN-NGGLDNCSSTMFKRPFLFL

SwissProt top hitse value%identityAlignment
O22800 Zinc finger protein CONSTANS-LIKE 143.2e-0836.56Show/hide
Query:  TAEVVMCELC-DSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGLDNCSST
        T  VV CE C + TA L+C+AD A LC  CD+ VH AN L+ +H+R  +C+ C           S       +V C E +   +G   +CSS+
Subjt:  TAEVVMCELC-DSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGLDNCSST

O82256 Zinc finger protein CONSTANS-LIKE 133.2e-0843.75Show/hide
Query:  MCELCDSTASL-YCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVL
        +C+ CDS+ +L YC+AD A LC  CDK VH AN L  +H R +LC+ C          T   VL
Subjt:  MCELCDSTASL-YCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVL

Q1G3I2 B-box domain protein 301.3e-1737.98Show/hide
Query:  MCKGVGE-----GNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTI
        MC+G  +      + GGC++            V CELC   A++YC+AD A+LCRKCD+ VH ANFLA RH+R ++C  C+ LT++ L+G +  V+LP I
Subjt:  MCKGVGE-----GNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTI

Query:  VTCTEANQCNNGGLDNCSSTMFKRPFLFL
               +          S+  K PF+FL
Subjt:  VTCTEANQCNNGGLDNCSSTMFKRPFLFL

Q9LJB7 B-box zinc finger protein 322.2e-1238.89Show/hide
Query:  VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGLDNCSSTM
        V  CELC + A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G    +  P   TC     C+     +C S++
Subjt:  VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGLDNCSSTM

Q9LRM4 B-box domain protein 312.5e-2143.08Show/hide
Query:  MCKGVG-----EGNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT-STEVLLPT
        MC+G+        + GGCR          +  V CELCD  AS++C+AD A+LCRKCD+ VHGANFLA RH+R +LC  CQ LT++ L+G     V+LP+
Subjt:  MCKGVG-----EGNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT-STEVLLPT

Query:  IVTCTEANQCNNGGLDNCSSTMFKRPFLFL
        + T  E    N    DN      + PF+FL
Subjt:  IVTCTEANQCNNGGLDNCSSTMFKRPFLFL

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 321.5e-1338.89Show/hide
Query:  VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGLDNCSSTM
        V  CELC + A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G    +  P   TC     C+     +C S++
Subjt:  VVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGLDNCSSTM

AT3G21890.1 B-box type zinc finger family protein1.8e-2243.08Show/hide
Query:  MCKGVG-----EGNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT-STEVLLPT
        MC+G+        + GGCR          +  V CELCD  AS++C+AD A+LCRKCD+ VHGANFLA RH+R +LC  CQ LT++ L+G     V+LP+
Subjt:  MCKGVG-----EGNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGT-STEVLLPT

Query:  IVTCTEANQCNNGGLDNCSSTMFKRPFLFL
        + T  E    N    DN      + PF+FL
Subjt:  IVTCTEANQCNNGGLDNCSSTMFKRPFLFL

AT4G15248.1 B-box type zinc finger family protein9.3e-1937.98Show/hide
Query:  MCKGVGE-----GNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTI
        MC+G  +      + GGC++            V CELC   A++YC+AD A+LCRKCD+ VH ANFLA RH+R ++C  C+ LT++ L+G +  V+LP I
Subjt:  MCKGVGE-----GNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTI

Query:  VTCTEANQCNNGGLDNCSSTMFKRPFLFL
               +          S+  K PF+FL
Subjt:  VTCTEANQCNNGGLDNCSSTMFKRPFLFL

AT4G27310.1 B-box type zinc finger family protein6.9e-1444.3Show/hide
Query:  CELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGG
        C+LC+  A +YC++D A LC  CD  VHGANFL  +H RC+LC+ CQ+LT     G     L PT   C       N G
Subjt:  CELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGG

AT5G54470.1 B-box type zinc finger family protein2.0e-1341.25Show/hide
Query:  CELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGL
        CELC   A +YC++D A LC  CD  VHGANFL  +H+RC+LC+ CQ+ T     G +    +    +C    + NN  L
Subjt:  CELCDSTASLYCQADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCTTATCTTATTAAGCACAACATGAAACATACATGGACACGCAAACCATACTATGACAGAGAGAAAGATGTGGAGGAAGCATATGTTGGTCCTCCATCAATTTC
ATTTACACAACTAGATTTTGTGGCTATATATACCACCTTTAATCCCTCTAAGTCTTCCCACATTAAGATTTGTATTTCAGTTTGTTTTGTGAAAATGTGTAAAGGTGTAG
GAGAGGGAAACCGTGGTGGTTGCAGGCAGTTTTCGGGGGCCGAGAAGGGCGATACGGCGGAGGTGGTGATGTGCGAGCTCTGCGACTCGACGGCTTCATTGTACTGCCAA
GCAGATGATGCTTATCTATGTAGAAAATGTGATAAAATGGTTCATGGTGCTAATTTCTTAGCACTAAGGCATATTAGATGTATTCTCTGTAATGGTTGCCAAAACCTTAC
GCAAAAATACCTCATGGGAACTTCTACTGAGGTTCTTCTTCCCACCATTGTCACCTGCACCGAAGCTAATCAATGTAACAATGGCGGTCTTGACAATTGTTCTTCAACAA
TGTTCAAAAGGCCTTTTCTTTTTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCTTATCTTATTAAGCACAACATGAAACATACATGGACACGCAAACCATACTATGACAGAGAGAAAGATGTGGAGGAAGCATATGTTGGTCCTCCATCAATTTC
ATTTACACAACTAGATTTTGTGGCTATATATACCACCTTTAATCCCTCTAAGTCTTCCCACATTAAGATTTGTATTTCAGTTTGTTTTGTGAAAATGTGTAAAGGTGTAG
GAGAGGGAAACCGTGGTGGTTGCAGGCAGTTTTCGGGGGCCGAGAAGGGCGATACGGCGGAGGTGGTGATGTGCGAGCTCTGCGACTCGACGGCTTCATTGTACTGCCAA
GCAGATGATGCTTATCTATGTAGAAAATGTGATAAAATGGTTCATGGTGCTAATTTCTTAGCACTAAGGCATATTAGATGTATTCTCTGTAATGGTTGCCAAAACCTTAC
GCAAAAATACCTCATGGGAACTTCTACTGAGGTTCTTCTTCCCACCATTGTCACCTGCACCGAAGCTAATCAATGTAACAATGGCGGTCTTGACAATTGTTCTTCAACAA
TGTTCAAAAGGCCTTTTCTTTTTTTATGAATCTAAAC
Protein sequenceShow/hide protein sequence
MFAYLIKHNMKHTWTRKPYYDREKDVEEAYVGPPSISFTQLDFVAIYTTFNPSKSSHIKICISVCFVKMCKGVGEGNRGGCRQFSGAEKGDTAEVVMCELCDSTASLYCQ
ADDAYLCRKCDKMVHGANFLALRHIRCILCNGCQNLTQKYLMGTSTEVLLPTIVTCTEANQCNNGGLDNCSSTMFKRPFLFL