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Sed0025429 (gene) of Chayote v1 genome

Gene IDSed0025429
OrganismSechium edule (Chayote v1)
DescriptionTransducin/WD40 repeat-like superfamily protein, putative
Genome locationLG03:46858232..46859331
RNA-Seq ExpressionSed0025429
SyntenySed0025429
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027328.1 hypothetical protein SDJN02_11340, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-4266.47Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM
        GGGDGGFSPRATVEDIQRRLLRP S+ SPPPTP   FSR K  QGRN SQF               GE A +KRKLEDYLDP LLSAVSSK+   +K+  
Subjt:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM

Query:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTAL
        M  K EVRDFEWPV ELRMLM++S VGK KI+ VNLGND SD+LT  DE+G  +FSTPFQKFE TAL
Subjt:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTAL

XP_022962693.1 uncharacterized protein LOC111463108 [Cucurbita moschata]1.7e-4265.09Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM
        GGGDGGFSPRA+VEDIQRRLLRP S+ SPPPTP   FSR K  QGRN SQF               GE A +KRKLEDYLDP LLSAVSSK+   +K+  
Subjt:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM

Query:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLTD--EDGVDQFSTPFQKFEHTALVI
        M  K EVRDFEWPV ELRMLM++S VGK KI++VNLGND SD+LT+  E+G  +FSTPFQKFE TALV+
Subjt:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLTD--EDGVDQFSTPFQKFEHTALVI

XP_022972790.1 uncharacterized protein LOC111471294 isoform X1 [Cucurbita maxima]7.7e-4365.68Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM
        GGGDGGFSPRATVEDIQRRLLRP S+ SPPPTP   FSR K  QGRN SQF               GE AS+KRKLEDYLDP LLSAVSSK+   +K+  
Subjt:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM

Query:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTALVI
        M  K EVRDFEWPV ELRMLM++S VGK K ++VNLGND SD+LT  DE+G  + STPFQKFE TALV+
Subjt:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTALVI

XP_023518840.1 uncharacterized protein LOC111782239 [Cucurbita pepo subsp. pepo]5.3e-4466.86Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM
        GGGDGGFSPRATVEDIQRRLLRP S+ SPPPTP   FSR K  QGRN SQF               GE AS+KRKLEDYLDP LLSAVSSK+   +K+  
Subjt:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM

Query:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTALVI
        M  K EVRDFEWPV ELRMLM++S VGK KI++VNLGND SD+LT  DE+G  +FSTPFQKFE TALV+
Subjt:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTALVI

XP_038877636.1 uncharacterized protein LOC120069887 isoform X1 [Benincasa hispida]9.1e-4464.91Show/hide
Query:  PEGGGDGGFSPRATVEDIQRRLLRP-PSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKVRKI--
        P GGGDGGFSPRATVEDIQRRL+RP  SL S PPTP   FSR K AQGR  SQF               GE ASKKRKLEDYLDP LLSAVSSK+ ++  
Subjt:  PEGGGDGGFSPRATVEDIQRRLLRP-PSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKVRKI--

Query:  ---AMMKPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVDQFSTPFQKFEHTALVI
             +K EVRDFEWPV+ELRMLME++ VGKEKID+VNLGND+ + +  +EDG  +FSTPFQKFEHTALV+
Subjt:  ---AMMKPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVDQFSTPFQKFEHTALVI

TrEMBL top hitse value%identityAlignment
A0A1S3BHM2 uncharacterized protein LOC103490160 isoform X21.9e-3961.54Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRP-PSLRSPPPTPS-----FSFSRSKYAQGRNPSQF----------GEAASKKRKLEDYLDPALLSAVSSKVRKI----
        GGGDGGFSPRATVEDIQRRLLRP  SL SPPP P+     F FS  K AQ RN SQF           E +SK+RKLEDYLDP LLSA+SSK+ +     
Subjt:  GGGDGGFSPRATVEDIQRRLLRP-PSLRSPPPTPS-----FSFSRSKYAQGRNPSQF----------GEAASKKRKLEDYLDPALLSAVSSKVRKI----

Query:  -AMMKPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVDQFSTPFQKFEHTALVI
           +K EVRDFEW VDELRM  E++ VGKEKID+VNLGNDS + +  D DG  +FSTPFQKFE  ALV+
Subjt:  -AMMKPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVDQFSTPFQKFEHTALVI

A0A5A7STW4 Putative Transducin/WD40 repeat-like superfamily protein1.9e-3961.54Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRP-PSLRSPPPTPS-----FSFSRSKYAQGRNPSQF----------GEAASKKRKLEDYLDPALLSAVSSKVRKI----
        GGGDGGFSPRATVEDIQRRLLRP  SL SPPP P+     F FS  K AQ RN SQF           E +SK+RKLEDYLDP LLSA+SSK+ +     
Subjt:  GGGDGGFSPRATVEDIQRRLLRP-PSLRSPPPTPS-----FSFSRSKYAQGRNPSQF----------GEAASKKRKLEDYLDPALLSAVSSKVRKI----

Query:  -AMMKPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVDQFSTPFQKFEHTALVI
           +K EVRDFEW VDELRM  E++ VGKEKID+VNLGNDS + +  D DG  +FSTPFQKFE  ALV+
Subjt:  -AMMKPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVDQFSTPFQKFEHTALVI

A0A6J1CRN4 uncharacterized protein LOC1110135632.9e-4066.04Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF----GEAAS-KKRKLEDYLDPALLSAVSSKV---RKIAMMKP--EVRDF
        GGGDG FSPRATVEDIQRRLLRP SL SP PTPS SFSR K  Q RN  Q     GE  S KK+KLEDYLDP LLSA +SK+   +K+  M P  EV DF
Subjt:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF----GEAAS-KKRKLEDYLDPALLSAVSSKV---RKIAMMKP--EVRDF

Query:  EWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVD-QFSTPFQKFEHTALVI
         WPVDELRMLME+S VGKEKID+V L  DS + +  DEDG D +FSTPFQKFE TAL++
Subjt:  EWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHL-TDEDGVD-QFSTPFQKFEHTALVI

A0A6J1HFI5 uncharacterized protein LOC1114631088.3e-4365.09Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM
        GGGDGGFSPRA+VEDIQRRLLRP S+ SPPPTP   FSR K  QGRN SQF               GE A +KRKLEDYLDP LLSAVSSK+   +K+  
Subjt:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM

Query:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLTD--EDGVDQFSTPFQKFEHTALVI
        M  K EVRDFEWPV ELRMLM++S VGK KI++VNLGND SD+LT+  E+G  +FSTPFQKFE TALV+
Subjt:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLTD--EDGVDQFSTPFQKFEHTALVI

A0A6J1I9M7 uncharacterized protein LOC111471294 isoform X13.7e-4365.68Show/hide
Query:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM
        GGGDGGFSPRATVEDIQRRLLRP S+ SPPPTP   FSR K  QGRN SQF               GE AS+KRKLEDYLDP LLSAVSSK+   +K+  
Subjt:  GGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQF---------------GEAASKKRKLEDYLDPALLSAVSSKV---RKIAM

Query:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTALVI
        M  K EVRDFEWPV ELRMLM++S VGK K ++VNLGND SD+LT  DE+G  + STPFQKFE TALV+
Subjt:  M--KPEVRDFEWPVDELRMLMEESPVGKEKIDSVNLGNDSSDHLT--DEDGVDQFSTPFQKFEHTALVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTGCCGGAAGGAGGCGGAGATGGAGGTTTCAGCCCACGCGCCACCGTGGAAGACATACAGAGACGCCTACTCCGACCACCGTCGCTTCGCTCTCCTCCGCCGAC
GCCTTCATTCTCGTTTTCTCGCAGCAAATACGCTCAAGGCCGAAATCCATCGCAATTCGGAGAAGCCGCGAGCAAGAAGAGGAAGCTCGAGGATTACTTGGATCCGGCTC
TTCTCTCTGCGGTTTCTTCGAAGGTTCGTAAGATCGCGATGATGAAGCCGGAGGTTAGGGATTTCGAGTGGCCGGTCGATGAATTGAGGATGTTGATGGAGGAATCGCCG
GTTGGTAAGGAGAAAATTGATTCTGTTAATCTTGGTAATGACAGCTCTGATCATCTTACAGATGAAGACGGAGTTGATCAATTCTCTACTCCGTTTCAAAAGTTTGAGCA
CACTGCGTTGGTAATAATAATAATAAAGGAGGACACGAAACTTCGAGTGTCGAGCACATGTCCAAAAAGTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTGCCGGAAGGAGGCGGAGATGGAGGTTTCAGCCCACGCGCCACCGTGGAAGACATACAGAGACGCCTACTCCGACCACCGTCGCTTCGCTCTCCTCCGCCGAC
GCCTTCATTCTCGTTTTCTCGCAGCAAATACGCTCAAGGCCGAAATCCATCGCAATTCGGAGAAGCCGCGAGCAAGAAGAGGAAGCTCGAGGATTACTTGGATCCGGCTC
TTCTCTCTGCGGTTTCTTCGAAGGTTCGTAAGATCGCGATGATGAAGCCGGAGGTTAGGGATTTCGAGTGGCCGGTCGATGAATTGAGGATGTTGATGGAGGAATCGCCG
GTTGGTAAGGAGAAAATTGATTCTGTTAATCTTGGTAATGACAGCTCTGATCATCTTACAGATGAAGACGGAGTTGATCAATTCTCTACTCCGTTTCAAAAGTTTGAGCA
CACTGCGTTGGTAATAATAATAATAAAGGAGGACACGAAACTTCGAGTGTCGAGCACATGTCCAAAAAGTGTCTGA
Protein sequenceShow/hide protein sequence
MELPEGGGDGGFSPRATVEDIQRRLLRPPSLRSPPPTPSFSFSRSKYAQGRNPSQFGEAASKKRKLEDYLDPALLSAVSSKVRKIAMMKPEVRDFEWPVDELRMLMEESP
VGKEKIDSVNLGNDSSDHLTDEDGVDQFSTPFQKFEHTALVIIIIKEDTKLRVSSTCPKSV