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Sed0025460 (gene) of Chayote v1 genome

Gene IDSed0025460
OrganismSechium edule (Chayote v1)
Descriptionpalmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
Genome locationLG09:32214304..32216461
RNA-Seq ExpressionSed0025460
SyntenySed0025460
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0009979 - 16:0 monogalactosyldiacylglycerol desaturase activity (molecular function)
GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (molecular function)
InterPro domainsIPR015876 - Acyl-CoA desaturase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451258.1 PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]3.6e-4175.73Show/hide
Query:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP
        TSM+NSVCH WG +PW T DLS NNW+VA+ TFGEGWHNNHHAFEYSAR GHEWWQ+D+GWY IKFLQ+IG ATNVKLPS   KQK AAL+KSK T LKP
Subjt:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP

Query:  IFD
        + D
Subjt:  IFD

XP_008451259.1 PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]6.2e-4178.22Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK
        +TSMVNSVCH WG +PW T DLS NNWMVALLTFGEGWHNNHHAFEYSAR G EWWQ+D+GWYFI+FL++IGLATNVK PS   KQK+AAL+KSK T LK
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK

Query:  P
        P
Subjt:  P

XP_011659261.2 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus]3.6e-4176.92Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK
        +TSMVNSVCH WG +PW T DLS NNWMVALLTFGEGWHNNHHAFEYSAR GHEWWQ+D+GWY I+FLQ+IGLATNVKLPS   KQK+AAL+KSK   LK
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK

Query:  PIFD
         + D
Subjt:  PIFD

XP_011659770.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus]2.8e-4176.7Show/hide
Query:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP
        TSM+NSVCH WG +PW T DLS NNW+VA+ TFGEGWHNNHHAFEYSAR GHEWWQ+D GWY IKFLQ+IGLATNVKLPS   KQKMAAL+KSK T L+P
Subjt:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP

Query:  IFD
        + D
Subjt:  IFD

XP_038899717.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida]1.3e-4379.81Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK
        +TSMVNSVCH WG++PW T DLS NNWMVA+LTFGEGWHNNHHAFEYSAR GHEWWQ+DFGWY IKFLQ+IGLATNVKLPS   KQK+AAL+KSK T LK
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK

Query:  PIFD
        P+ D
Subjt:  PIFD

TrEMBL top hitse value%identityAlignment
A0A0A0K8P8 FA_desaturase domain-containing protein1.3e-4176.7Show/hide
Query:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP
        TSM+NSVCH WG +PW T DLS NNW+VA+ TFGEGWHNNHHAFEYSAR GHEWWQ+D GWY IKFLQ+IGLATNVKLPS   KQKMAAL+KSK T L+P
Subjt:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP

Query:  IFD
        + D
Subjt:  IFD

A0A0A0KAB1 FA_desaturase domain-containing protein1.8e-4176.92Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK
        +TSMVNSVCH WG +PW T DLS NNWMVALLTFGEGWHNNHHAFEYSAR GHEWWQ+D+GWY I+FLQ+IGLATNVKLPS   KQK+AAL+KSK   LK
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK

Query:  PIFD
         + D
Subjt:  PIFD

A0A1S3BQG5 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like3.0e-4178.22Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK
        +TSMVNSVCH WG +PW T DLS NNWMVALLTFGEGWHNNHHAFEYSAR G EWWQ+D+GWYFI+FL++IGLATNVK PS   KQK+AAL+KSK T LK
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLK

Query:  P
        P
Subjt:  P

A0A1S3BS49 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like1.8e-4175.73Show/hide
Query:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP
        TSM+NSVCH WG +PW T DLS NNW+VA+ TFGEGWHNNHHAFEYSAR GHEWWQ+D+GWY IKFLQ+IG ATNVKLPS   KQK AAL+KSK T LKP
Subjt:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKP

Query:  IFD
        + D
Subjt:  IFD

A0A6J1JX80 delta-9 acyl-lipid desaturase 2-like2.8e-3977.55Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTL
        +TSM+NSVCH WG++PW T DLS NNWMVAL+TFGEGWHNNHHAFEYSAR GHEWW++DFGWY IKFLQ IGLAT VKLPS    QK+AAL+KSKS L
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTL

SwissProt top hitse value%identityAlignment
P0DOW2 Acyl-CoA C20 Delta5-desaturase6.9e-3569.77Show/hide
Query:  MVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA
        +VNSVCH WG RPW T DLSTNNW +A+LT GEGWHNNHHAFEYSAR G EWWQ+D  WY IK L+ +GLAT++K+PS  HK+KM+
Subjt:  MVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA

P0DOW3 Acyl-CoA 5-desaturase AL211.9e-3267.44Show/hide
Query:  MVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA
        +VNSVCH +G + W T DLSTNNW +A+LT GEGWHNNHHAFEYSAR G EWWQ+D  WY IK L+ +GLAT+VK+PS  HK+KM+
Subjt:  MVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA

Q949X0 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic2.9e-3368.54Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA
        +T +VNS CH WG++ W T DLS NNW VA L FGEGWHNNHHAFE+SAR G EWWQ+D  WY +KFLQ IGLAT+VKLPS   KQ+MA
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA

Q9FV68 Icosanoyl-CoA 5-desaturase (Fragment)2.5e-3268.54Show/hide
Query:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAA
        T  +NSVCH WG RPW T DLSTNN  VAL  FGEGWHNNHHAFE SAR G EWW++D  WY I+ LQ IGLATNVKLP+   KQK+ A
Subjt:  TSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAA

Q9LVZ3 Probable lipid desaturase ADS3.2, chloroplastic1.8e-3069.14Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPS
        +T +VNSVCH WG R W T+D S NNW VA+LT GEGWHNNHHAFE+SAR G EWWQ+D  W  I+FL+ IGLATNVKLP+
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPS

Arabidopsis top hitse value%identityAlignment
AT1G06080.1 delta 9 desaturase 12.8e-3158.43Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA
        +T ++NS+CH WG R WKT D S N W +++ +FGE WHNNHHAFE SAR G EWWQ+D  WY ++FL++IGLAT+VKLPS   +++MA
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA

AT1G06360.1 Fatty acid desaturase family protein4.0e-3060.67Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA
        +T +VNS CH WG R WKT D S N W ++L T GE WHNNHHAFE SAR G EWWQ+D  WY I+  +++GLAT+VKLPS   KQK+A
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA

AT2G31360.1 16:0delta9 desaturase 26.9e-3055.06Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA
        +T ++NS+CH WG R WKT D S N W +++ +FGE WHNNHHAFE SAR G EWWQ+D  WY ++F ++IGLAT+VK+P+   +++MA
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA

AT3G15850.1 fatty acid desaturase 52.1e-3468.54Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA
        +T +VNS CH WG++ W T DLS NNW VA L FGEGWHNNHHAFE+SAR G EWWQ+D  WY +KFLQ IGLAT+VKLPS   KQ+MA
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMA

AT3G15870.1 Fatty acid desaturase family protein1.3e-3169.14Show/hide
Query:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPS
        +T +VNSVCH WG R W T+D S NNW VA+LT GEGWHNNHHAFE+SAR G EWWQ+D  W  I+FL+ IGLATNVKLP+
Subjt:  MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTATGGTAAATTCAGTATGCCATAATTGGGGAGAGCGACCATGGAAAACTGCTGATTTGTCTACAAACAATTGGATGGTGGCTTTACTTACCTTTGGAGAAGG
ATGGCACAATAATCACCATGCTTTTGAATATTCAGCCAGGCTTGGCCATGAATGGTGGCAGGTTGATTTTGGTTGGTACTTTATTAAGTTTCTTCAACTCATTGGATTGG
CCACTAATGTCAAATTACCTTCTCACAAGCACAAGCAAAAGATGGCTGCTTTGGACAAATCAAAATCTACCTTGCTTAAGCCTATCTTTGATAAAGATTACAATAATTAT
TGTTGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTATGGTAAATTCAGTATGCCATAATTGGGGAGAGCGACCATGGAAAACTGCTGATTTGTCTACAAACAATTGGATGGTGGCTTTACTTACCTTTGGAGAAGG
ATGGCACAATAATCACCATGCTTTTGAATATTCAGCCAGGCTTGGCCATGAATGGTGGCAGGTTGATTTTGGTTGGTACTTTATTAAGTTTCTTCAACTCATTGGATTGG
CCACTAATGTCAAATTACCTTCTCACAAGCACAAGCAAAAGATGGCTGCTTTGGACAAATCAAAATCTACCTTGCTTAAGCCTATCTTTGATAAAGATTACAATAATTAT
TGTTGCTTCTAA
Protein sequenceShow/hide protein sequence
MTSMVNSVCHNWGERPWKTADLSTNNWMVALLTFGEGWHNNHHAFEYSARLGHEWWQVDFGWYFIKFLQLIGLATNVKLPSHKHKQKMAALDKSKSTLLKPIFDKDYNNY
CCF