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Sed0025463 (gene) of Chayote v1 genome

Gene IDSed0025463
OrganismSechium edule (Chayote v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationLG03:6309301..6309786
RNA-Seq ExpressionSed0025463
SyntenySed0025463
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.7e-5075.66Show/hide
Query:  MNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAF
        MNELYSFITAINERNPEI+S      LPICITM  P PA +    NN+GK ILGLTFQAVLALFI+ P+S PPL THLF AA+LISFAVSFAG+FLQN F
Subjt:  MNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAF

Query:  PRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK
        PRI+LLF KIGALIAAIGVCI+A  LLIHQ+FAWISWLA GFSL+ FVLSF+
Subjt:  PRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3466.95Show/hide
Query:  MHMPPPAKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAW
        +H  P A+   NNLGK++ GLTFQAVLALFIS P+S+PPL  +LF AAMLIS A+S A LFLQ AFPRI+L FGKIGA++AA+G CI+A LLL HQ+F+W
Subjt:  MHMPPPAKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAW

Query:  ISWLACGFSLVTFVLSFK
        I WLACGF+L+ F+LSFK
Subjt:  ISWLACGFSLVTFVLSFK

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3565.12Show/hide
Query:  DGLPICITMHMPPP---AKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIA
        DGLP    M  PPP   +    NNLGK++ GLTFQAVLALFISPP+S PPL  H+F AAMLISFA+S A LFLQ A+PRI+L  GKIGAL+AAIG C I 
Subjt:  DGLPICITMHMPPP---AKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIA

Query:  GLLLIHQSFAWISWLACGFSLVTFVLSFK
         +LL HQ F+WI WLACGF+L+ F+LSFK
Subjt:  GLLLIHQSFAWISWLACGFSLVTFVLSFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]1.8e-4969.33Show/hide
Query:  MEPNSDQITLDMNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAV
        ME +S QI++DMN LYS IT+INERNPEI      +GLPICI M    PA +    NN+G  ILGLTFQAVLALFI+  +S PPL THLFGAA+LISFAV
Subjt:  MEPNSDQITLDMNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAV

Query:  SFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK
        SF G+FLQ+ FPRI+LLF KIGALIAAIGVCI+A  LLIHQ+FAWISWLACGFSL+ F+LSF+
Subjt:  SFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]1.2e-3454.27Show/hide
Query:  MEPNSDQITLDMNELYSFITAINERNPEISSIAW-GDGLPICITMHMPPPAKTPPN-NLGKMILGLTFQAVLALFI-SPPSSYPPLWTHLFGAAMLISFA
        M   S Q +LDM+   SFI  I++RN  +       + LP+ I M   P A    +  LGK+IL L+FQAVLALFI SPP+S PPL  H F AA+ ISFA
Subjt:  MEPNSDQITLDMNELYSFITAINERNPEISSIAW-GDGLPICITMHMPPPAKTPPN-NLGKMILGLTFQAVLALFI-SPPSSYPPLWTHLFGAAMLISFA

Query:  VSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK
        VSFA LFL N+FPR + LF K+GAL +A GVC IA  LL+HQ+FAWI W+AC FS++ F LSFK
Subjt:  VSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein8.6e-5069.33Show/hide
Query:  MEPNSDQITLDMNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAV
        ME +S QI++DMN LYS IT+INERNPEI      +GLPICI M    PA +    NN+G  ILGLTFQAVLALFI+  +S PPL THLFGAA+LISFAV
Subjt:  MEPNSDQITLDMNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAV

Query:  SFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK
        SF G+FLQ+ FPRI+LLF KIGALIAAIGVCI+A  LLIHQ+FAWISWLACGFSL+ F+LSF+
Subjt:  SFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK

A0A0A0KJP2 Uncharacterized protein6.0e-3554.27Show/hide
Query:  MEPNSDQITLDMNELYSFITAINERNPEISSIAW-GDGLPICITMHMPPPAKTPPN-NLGKMILGLTFQAVLALFI-SPPSSYPPLWTHLFGAAMLISFA
        M   S Q +LDM+   SFI  I++RN  +       + LP+ I M   P A    +  LGK+IL L+FQAVLALFI SPP+S PPL  H F AA+ ISFA
Subjt:  MEPNSDQITLDMNELYSFITAINERNPEISSIAW-GDGLPICITMHMPPPAKTPPN-NLGKMILGLTFQAVLALFI-SPPSSYPPLWTHLFGAAMLISFA

Query:  VSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK
        VSFA LFL N+FPR + LF K+GAL +A GVC IA  LL+HQ+FAWI W+AC FS++ F LSFK
Subjt:  VSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.3e-5075.66Show/hide
Query:  MNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAF
        MNELYSFITAINERNPEI+S      LPICITM  P PA +    NN+GK ILGLTFQAVLALFI+ P+S PPL THLF AA+LISFAVSFAG+FLQN F
Subjt:  MNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKT--PPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAF

Query:  PRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK
        PRI+LLF KIGALIAAIGVCI+A  LLIHQ+FAWISWLA GFSL+ FVLSF+
Subjt:  PRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter9.0e-3150Show/hide
Query:  EPNSDQITLDMNELYSFITAINERNPEISSIAWG----DGLPICITMHMPPPAKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFA
        E    +I+LDMNELYSFITA+  RNP ISS  WG    D LPI I M  P P  +P    G   +   FQA+L LF++ P S PPL + L G  ML +F 
Subjt:  EPNSDQITLDMNELYSFITAINERNPEISSIAWG----DGLPICITMHMPPPAKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFA

Query:  VSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK
         SF G+ LQ  FP+I+ L    GAL+AAIGVCI+ G  L+H +  WI WLACG  L  F+ SFK
Subjt:  VSFAGLFLQNAFPRISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK

A0A6J1CY58 uncharacterized protein LOC1110156584.0e-3166.4Show/hide
Query:  MEPNSDQITLDMNELYSFITAINERNPEISSIAWGDG-------LPICITMHMPPPAKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAML
        M     Q ++DMN L SFITAINERN  ISS  WG G       LPICI M  PPPAK+   +LGK ILGLTFQAVLALFIS PSS P L T LFGAA+L
Subjt:  MEPNSDQITLDMNELYSFITAINERNPEISSIAWGDG-------LPICITMHMPPPAKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAML

Query:  ISFAVSFAGLFLQNAFPRISLLFGK
        ISFAVSFAGLFLQ A+PR++LLF K
Subjt:  ISFAVSFAGLFLQNAFPRISLLFGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCAAATTCAGACCAAATTACCCTTGATATGAATGAACTATATTCCTTCATCACTGCAATTAATGAAAGAAATCCTGAAATCAGCAGTATTGCCTGGGGAGATGG
CCTTCCAATTTGCATCACAATGCACATGCCTCCACCAGCCAAGACACCTCCGAATAATCTTGGCAAGATGATTCTCGGCCTTACTTTTCAGGCAGTTCTGGCCTTGTTCA
TCAGCCCACCTAGTTCGTATCCTCCGCTTTGGACACATCTCTTTGGTGCTGCTATGTTGATCAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCC
AGAATCTCGCTTTTGTTCGGAAAGATCGGTGCTCTTATTGCTGCCATTGGTGTGTGCATCATAGCCGGTCTTCTTCTAATCCATCAGAGTTTTGCTTGGATCTCTTGGCT
GGCATGTGGCTTCTCCTTGGTAACCTTTGTTCTATCATTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCAAATTCAGACCAAATTACCCTTGATATGAATGAACTATATTCCTTCATCACTGCAATTAATGAAAGAAATCCTGAAATCAGCAGTATTGCCTGGGGAGATGG
CCTTCCAATTTGCATCACAATGCACATGCCTCCACCAGCCAAGACACCTCCGAATAATCTTGGCAAGATGATTCTCGGCCTTACTTTTCAGGCAGTTCTGGCCTTGTTCA
TCAGCCCACCTAGTTCGTATCCTCCGCTTTGGACACATCTCTTTGGTGCTGCTATGTTGATCAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCC
AGAATCTCGCTTTTGTTCGGAAAGATCGGTGCTCTTATTGCTGCCATTGGTGTGTGCATCATAGCCGGTCTTCTTCTAATCCATCAGAGTTTTGCTTGGATCTCTTGGCT
GGCATGTGGCTTCTCCTTGGTAACCTTTGTTCTATCATTCAAGTGA
Protein sequenceShow/hide protein sequence
MEPNSDQITLDMNELYSFITAINERNPEISSIAWGDGLPICITMHMPPPAKTPPNNLGKMILGLTFQAVLALFISPPSSYPPLWTHLFGAAMLISFAVSFAGLFLQNAFP
RISLLFGKIGALIAAIGVCIIAGLLLIHQSFAWISWLACGFSLVTFVLSFK