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Sed0025466 (gene) of Chayote v1 genome

Gene IDSed0025466
OrganismSechium edule (Chayote v1)
DescriptionProtein Ycf2-like
Genome locationLG05:25831145..25835219
RNA-Seq ExpressionSed0025466
SyntenySed0025466
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]2.1e-1944.04Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        DHI+M DD E+F+  PWGRVA++LLV  +  V  +KG   + M G ++ +LAWAYEVI  LS+   ++  + S  +PRI+N  +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
        PTL+V+P++
Subjt:  PTLKVNPIV
KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]6.2e-1943.12Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        DHI+M DD E+F+  PWGRVA++LLV  +  V  +KG   + + G ++ +LAWAYEV   LS+   ++A +    +PRI+NW +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
        PTL+V+P++
Subjt:  PTLKVNPIV
TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]1.6e-1944.55Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGM-SGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFK
        DHI+M DD E+F+  PWGRVA++LLV  +     +KG   + M  G ++ +LAWAYEVI  LS+   ++A + S  +PRI+NW +D Q +W+DL   +F 
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGM-SGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFK

Query:  NPTLKVNPIV
        +PTL+V+P++
Subjt:  NPTLKVNPIV
TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]3.1e-1842.2Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        D+I+M DD E+F+  PWGRVA++LLV  +     +KG   + + G ++ +LAWAYEVI  LS+   ++A + S  +PRI+NW +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
         TL+V+P++
Subjt:  PTLKVNPIV
TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]6.2e-1943.12Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        DHI+M DD E+F+  PWGRVA++LLV  +  V  +KG   + + G ++ +LAWAYEV   LS+   ++A +    +PRI+NW +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
        PTL+V+P++
Subjt:  PTLKVNPIV
TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like1.0e-1944.04Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        DHI+M DD E+F+  PWGRVA++LLV  +  V  +KG   + M G ++ +LAWAYEVI  LS+   ++  + S  +PRI+N  +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
        PTL+V+P++
Subjt:  PTLKVNPIV
A0A5A7U6E1 Protein Ycf2-like3.0e-1943.12Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        DHI+M DD E+F+  PWGRVA++LLV  +  V  +KG   + + G ++ +LAWAYEV   LS+   ++A +    +PRI+NW +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
        PTL+V+P++
Subjt:  PTLKVNPIV
A0A5D3CEX9 Protein Ycf2-like8.0e-2044.55Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGM-SGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFK
        DHI+M DD E+F+  PWGRVA++LLV  +     +KG   + M  G ++ +LAWAYEVI  LS+   ++A + S  +PRI+NW +D Q +W+DL   +F 
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGM-SGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFK

Query:  NPTLKVNPIV
        +PTL+V+P++
Subjt:  NPTLKVNPIV
A0A5D3DCN3 Protein Ycf2-like1.5e-1842.2Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        D+I+M DD E+F+  PWGRVA++LLV  +     +KG   + + G ++ +LAWAYEVI  LS+   ++A + S  +PRI+NW +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
         TL+V+P++
Subjt:  PTLKVNPIV
A0A5D3DKA6 Protein Ycf2-like3.0e-1943.12Show/hide
Query:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN
        DHI+M DD E+F+  PWGRVA++LLV  +  V  +KG   + + G ++ +LAWAYEV   LS+   ++A +    +PRI+NW +D Q +W+DL   +F +
Subjt:  DHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDSDAQLEWRDLLTSIFKN

Query:  PTLKVNPIV
        PTL+V+P++
Subjt:  PTLKVNPIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G10260.1 FUNCTIONS IN: molecular_function unknown5.5e-0536.36Show/hide
Query:  DLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDS---DAQLEWRD
        DL  F + PWG VA++ L+ +V+ V   K    V + G V+ LL W YE I  L+ T F   + T   +P +L+W S   +  L+W D
Subjt:  DLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDS---DAQLEWRD
AT2G10260.2 FUNCTIONS IN: molecular_function unknown5.5e-0536.36Show/hide
Query:  DLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDS---DAQLEWRD
        DL  F + PWG VA++ L+ +V+ V   K    V + G V+ LL W YE I  L+ T F   + T   +P +L+W S   +  L+W D
Subjt:  DLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDS---DAQLEWRD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGATCAAGGTGGCATTGTTGTATACTTAGAGAGATTTCTTCTGCCGAAGCAAGAGTGGCTATTAAGGATGATCACATCCTAATGGCGGATGACCTAGAACT
GTTCAATCGGTGCCCGTGGGGGAGGGTGGCATACCAGCTACTTGTCGCCAACGTACGAAGTGTTAAAACGACAAAGGGAAACTGTACAGTGGGAATGAGTGGGCTAGTGT
ACACGCTTCTAGCTTGGGCATACGAAGTAATACTAGCGTTGAGTAGTACATCGTTTTACTATGCAAAAAAGACTAGTCAATTGTTACCGAGAATATTGAATTGGGATTCG
GATGCCCAACTAGAATGGCGGGATCTACTGACTTCTATATTTAAGAACCCAACGCTTAAGGTAAACCCAATAGTTCCCAGCGATTGA
mRNA sequenceShow/hide mRNA sequence
CCTTTGTAACAAAATAGGCGAATTTCCCCCAAATTCCAGACGACCATTCGACTCCCATTGCAACATAGCCCTAGATGTCTTTGGAGTCCCCGTACAATCTGCGACTTCTC
TTCCCCGATCAACGCCGTCGTGACATGCAATCATTTGCACTCAAGTTGTAGACGACTTTTAAAGCATTGTTCGATACAGCTCCGACTGCACCCTCACACGCTCTTCGCCT
CTGCTTTGCTTCGTTCTCTTCTACGGCGTTTCAAGCGTTGCTGGCCATCTACGAAATCGAAGGCATCCCTCAGTGTACCGAACAGTCTCCGCGCTCTAGAACGTTAAAGA
AAAAAGAGATATATAGCAAAGGATAAACAACTCGCACGGGGTGCTAGGGCAAGCAATCGTTTGAAGGCAGTCGGCGTTCTACCAGGTTCGAAGATAGCTCACAAAGGTCC
CCTAATCGAAGTGAATGGTTCTGGTAGCTCGGAGGAGTCAGTTGATAAAACTCCAACCACAATGCCGAAGAGCACAAAATGAGAACGGCCTAAGTTAATACAAACAAAAC
TCGGACCTTCACGAACCCACATGAAAAAGAAGAGAATTGCAGAAGAAGAGGATGACAAAATTAAGTCGATGAATGACTTAGATGACCATCATGCCGATGCAAGAAGCTAG
GATTCAAATGGTGGGGAAGAGGCATCGTTCGAAGAGGAAGAGATCCCTAATTCAGACCACGAACTACCGAAAAAACCAGTTCGATCGGAGAAGGAAAAGATTAATCTTAC
TAAGAAGGATACGAAGGGGAAGGGTCCGCAAGATGAGGTGGCTGGGAAAAACAAGATAGAACCGGCGATCGTTCTGAAATCGGATGACGACTACGTGATAACAGTTGCCC
GGAGGTCAAGGCTTCTGAAAATAAACCTGTGTTGTAAGAGCACGATCATGAGTAACATAATTCGAAATCTTGGTGAGAACCTCACTCTGAAATTTTGGGAAAGCTGTTTT
GGAGGGCTACTAGATTTTTCGGTGAAGAAGATATCGCCACAACTCTTATTGCACCTGATTCAACGTTAGTGCAAGGCTAGGAAGTTTCCCGACCTAACATTCAAAATATG
GGGTAAATATCTGCATTTTGGTATAGAGGAGTTCTCCCTTATTACCTGTCTGAACTATGGCCACATATCGAAGATTGATAGGGCATCTATTAAGGGAGAGGGAAAGCTGA
AATGGGAGTACTTTGATGACGTTGAGATAGTCAAACGGACAATGTTAAACATGGATTTTAAGTTTAACATGAAGGGATCAGATGAAGAAAAGATCAAGGTGGCATTGTTG
TATACTTAGAGAGATTTCTTCTGCCGAAGCAAGAGTGGCTATTAAGGATGATCACATCCTAATGGCGGATGACCTAGAACTGTTCAATCGGTGCCCGTGGGGGAGGGTGG
CATACCAGCTACTTGTCGCCAACGTACGAAGTGTTAAAACGACAAAGGGAAACTGTACAGTGGGAATGAGTGGGCTAGTGTACACGCTTCTAGCTTGGGCATACGAAGTA
ATACTAGCGTTGAGTAGTACATCGTTTTACTATGCAAAAAAGACTAGTCAATTGTTACCGAGAATATTGAATTGGGATTCGGATGCCCAACTAGAATGGCGGGATCTACT
GACTTCTATATTTAAGAACCCAACGCTTAAGGTAAACCCAATAGTTCCCAGCGATTGAAGAGCTAACTATGCCTTATTTCTCTTCATTCTTTGCTAATGAGTTAGTCGCT
CGTGAATGGAATAGCCCTACATGTGGAGCAAGATAAATATCCTCTAATGCTTAGATCGGGACTTCGTCGGCAACCCATATGGCTGTTGAAGTTGCCCGACGACTAGATAC
AATCGAACAAACCATAAGGTGTGTGAGGAGTGAGCTGTCGATGTTGGTTGCTGAAGTGAAAGACATTGGTAGACAACTAGTTGTATTATGCCAAAGAGATGTCAACATCC
AGGAAGTCCCAATCCATGAAACGTGTTCCAGGAGCGCGTGTCTGGGAGGAGGTGAGTGCAATTATTACTATAACTGACTTTGATCCTTGTAGAACAAATAAGGACGTATC
AGAGATACATGGTTGAAAACCATATTCCATAATTTTCGCAGTGAAGCATGAGAACCACGCACGCGGAGCTTGCTTCAATCCATACAGAGACTTAAGGAGACGACACACTG
CATTTGGTCGACGTGGATCAACAAAGCCTTGAGGTTGTTGCATGTAGACTTCTTCATCCAATTCTTCATGAAGAAATGTGTTATTTACATCCAATTGGCGTACAAGCCAT
TGAAAAGTAGCAGCCAATGCCAAAATTGTCCGCATTGTTGGTTTCTTAACAATTGGGTTGAATGTTTTGAAGTAATCGACCCCTTCTTGTTGTGAGAAACCACGAGCAAC
CAAACGAGCTTTAAATCTAGCGATGCTACCATCAGGGTTGTGTTTTAGTTTGTATATCTACTTGCATCCTACAAGATTTTTGTTTATAGGTAAACCAACAAGATCCTAGG
TTCTTTGACTTATTAAGGCACCATACTCATCAGACATGGCTGCTTTCCAAGAAGGATATTTTGATGCTTGGGTAAAGGAGGTGGGCTCAATAGGCTTTGGATTAGCAATA
GCAACAAACACTTTTTTTCTTGGATATGTCAGACTTCGCTCTCATTTGCATTGAATGAGTGTTCTAAGAAGTGATAAGAGGCACATTTTCTACATAAGCTATAACTGCTG
GTTCATTGGACAAATGAGAGGCTATATGTGCAGGTGAAACAACAATATGAGCTTCTGGTTCATTTGAATGATCAACAATAGATGCAAGAGAAATTGGGTACTTATTTCCA
TGATGATCAACAATATGAACTTCTGGTTCAAGTGGCTGATCAAGAGTAGATGCAGTAGCAATTTGGTTCTCAATAGTAGGCACTGGTTCGGATGAAATAACACGGTTAGT
AGATGAAGGAGCTTCAGACACAGTGACAGGATCATGTATTGTAGAAGTTTTTATAATAGGTGGTGGAAGAAAGATATGATAAGGAGACAATGAAGAAGTAGAGTCATTAT
TTGTCAAGGTAGATAAAACTTGTTCTGCAAAAGGAAAACGAGATTCATAAAAAACAACATGACGGAAAATATAAAATTTGTTAGCCAAGGGATCGTAGCAAATATATCAT
TTGTAGTCCTTAGGATAACCCATAAAGATACAGGTTTGAGTTCGATTCTGCAATTTATGTTGAGTATATGGTCGAAGTAATGGATAACATGCACATCCTAGAGTT
Protein sequenceShow/hide protein sequence
MKKRSRWHCCILREISSAEARVAIKDDHILMADDLELFNRCPWGRVAYQLLVANVRSVKTTKGNCTVGMSGLVYTLLAWAYEVILALSSTSFYYAKKTSQLLPRILNWDS
DAQLEWRDLLTSIFKNPTLKVNPIVPSD