CuGenDBv2

Gene ID	Sed0025475
Organism	Sechium edule (Chayote v1)
Description	ABC transporter A family protein
Genome location	LG05:2571741..2574277
RNA-Seq Expression	Sed0025475
Synteny	Sed0025475
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035773.1 hypothetical protein SDJN02_02571, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-22

81.94

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGY+LRVR ASFFAGAAVAS LGFY+L +DYKIAY+SIS KM GLHDSLESRISALEKL QND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

XP_008437667.1 PREDICTED: uncharacterized protein LOC103483008 [Cucumis melo]

1.6e-21

80.56

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SISHKM GLHDS+ SRISALEKL QND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

XP_011654572.1 uncharacterized protein LOC101210533 [Cucumis sativus]

2.0e-21

80.56

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SISHKM GLHDSL SRISALEKL +ND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

XP_022138131.1 uncharacterized protein LOC111009377 [Momordica charantia]

1.2e-21

81.94

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SIS KM GLHDSLESRISALEKL QND SQHV T+E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

XP_023551615.1 uncharacterized protein LOC111809395 [Cucurbita pepo subsp. pepo]

2.0e-21

80.56

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SIS KM GLHDS+ESRISALEKL QND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJB2 Uncharacterized protein

9.9e-22

80.56

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SISHKM GLHDSL SRISALEKL +ND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

A0A1S3AUK7 uncharacterized protein LOC103483008

7.6e-22

80.56

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SISHKM GLHDS+ SRISALEKL QND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

A0A6J1C8U6 uncharacterized protein LOC111009377

5.8e-22

81.94

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SIS KM GLHDSLESRISALEKL QND SQHV T+E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

A0A6J1E8L7 uncharacterized protein LOC111430397

2.9e-21

79.17

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFF GAAVAS LG Y+L +DYKIAY+SIS KM GLHDS+ESRISALEKL QND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

A0A6J1IFZ7 uncharacterized protein LOC111472986

9.9e-22

80.56

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYVLRVR ASFFAGAAVAS LG Y+L +DYKIAY+SIS KM GLHDS+ESRISALEKL QND SQHVQ +E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G53650.1 unknown protein

9.5e-17

58.33

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Query:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE
        MGYV RVR ASFFAGAA AS +G  +L+KDYK+A+ESIS + +  HDSL+ RIS LE L+Q++  Q  +T+E
Subjt:  MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

Sequences

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CDS sequence

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ATGGGTTATGTGCTGAGAGTGAGATTTGCTTCCTTCTTCGCCGGAGCGGCGGTTGCGTCGTGTCTAGGGTTTTATATTCTCCACAAAGATTACAAGATCGCTTATGAATC
CATTTCGCATAAGATGGAAGGGCTGCATGATTCTCTGGAGAGTAGAATTTCGGCACTCGAAAAGCTGAAGCAGAATGATGATTCTCAACATGTTCAAACATCTGAGTAG

mRNA sequence

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TAATTTTGCAATTTACGGGTGGTAGAAAGAACACGGTTCGGGGACAGAAAAGCGAAGCCGAAGAACGAAATGGGTTATGTGCTGAGAGTGAGATTTGCTTCCTTCTTCGC
CGGAGCGGCGGTTGCGTCGTGTCTAGGGTTTTATATTCTCCACAAAGATTACAAGATCGCTTATGAATCCATTTCGCATAAGATGGAAGGGCTGCATGATTCTCTGGAGA
GTAGAATTTCGGCACTCGAAAAGCTGAAGCAGAATGATGATTCTCAACATGTTCAAACATCTGAGTAGACACTGGAGGCCAAGCCAGGATAGGGCCTTGGAATATAAAGA
ATTTAGGAGGAATAACAACAGCACAAAAACTGGTCTTCTTTGTGTGCTAAACAAGATGTCAAGTTTTTTCTTGGAAAATTTGTTGATTTAGTGTATGAATTCTGATCTTT
GTTGTTATCAGATTTAGGTTTGTACTGAACTCCAACTTTACTTAAAGTTGATGTGGCTGAATGATCCATCCCTTCACTTTGGATCATAGCCTTCTTCCTTTGCTCTTTTT
CATTTTGTCAATGATGGAAGTTTCATGCAAGACTTGGTAATGAAATTTGTGGGAAGCAGAAAAAAAAAAAAATAGCTCCTTAAAGTTCCAGTCATTGTGAATTTTAGAAA
GTTT

Protein sequence

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MGYVLRVRFASFFAGAAVASCLGFYILHKDYKIAYESISHKMEGLHDSLESRISALEKLKQNDDSQHVQTSE

Sed0025475 (gene) of Chayote v1 genome