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Sed0025479 (gene) of Chayote v1 genome

Gene IDSed0025479
OrganismSechium edule (Chayote v1)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationLG10:8431750..8432045
RNA-Seq ExpressionSed0025479
SyntenySed0025479
Gene Ontology termsGO:0009626 - plant-type hypersensitive response (biological process)
GO:0010337 - regulation of salicylic acid metabolic process (biological process)
GO:2000031 - regulation of salicylic acid mediated signaling pathway (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025678.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]1.2e-2675Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYS-DHEVMWIDGR
        KN K PS +TL ERLREAVFRFIMLCA SKA+NHH +  AGA F  DD V+RRRHSY N DHHHSEAVADCIEFIK KAYS DHEV+ I GR
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYS-DHEVMWIDGR

KAF9682207.1 hypothetical protein SADUNF_Sadunf05G0084600 [Salix dunnii]1.4e-1460.26Show/hide
Query:  SPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHE
        SP+TLLER R+AVFR +ML A SKA     +H A AG   D   M++R SY  AD HHSEAVADCIEFIKK + SDH+
Subjt:  SPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHE

KAG6603914.1 hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2674.71Show/hide
Query:  MKNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVM
        MKN KAP  +TL ERLREAVFRFIMLCA SKA+NH   H AGA F   DDV+RRR SYQN DHHHSEAVADCIEFIKKKAYSD +++
Subjt:  MKNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVM

KAG8478177.1 hypothetical protein CXB51_027971 [Gossypium anomalum]5.4e-1462.03Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA
        KN K  SPVTLL+R REAVFR IML A SKAS+HHR H +     +   V RR   Y  AD HH+EAVADCIEFIKKK+
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA

KGN49339.2 hypothetical protein Csa_003207 [Cucumis sativus]2.3e-2575.58Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVM
        K  K PSP+TL ERLREAVFRFIMLCA SKA+NHH +  AGA F  DD V+RRRHSY N DHHHSEAVADCIEFIK KAYSD EV+
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVM

TrEMBL top hitse value%identityAlignment
A0A0A0KGN3 Uncharacterized protein1.1e-2575.58Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVM
        K  K PSP+TL ERLREAVFRFIMLCA SKA+NHH +  AGA F  DD V+RRRHSY N DHHHSEAVADCIEFIK KAYSD EV+
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVM

A0A1U8K2Y4 uncharacterized protein LOC1079129974.4e-1462.03Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA
        KN K  SPVTLLER REAVFR IML A SKAS+HH  H +     +   V RR   Y  AD HH+EAVADCIEFIKKK+
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA

A0A5A7SHP0 Transducin/WD40 repeat-like superfamily protein6.0e-2775Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYS-DHEVMWIDGR
        KN K PS +TL ERLREAVFRFIMLCA SKA+NHH +  AGA F  DD V+RRRHSY N DHHHSEAVADCIEFIK KAYS DHEV+ I GR
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYS-DHEVMWIDGR

A0A5D2NDI0 Uncharacterized protein4.4e-1462.03Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA
        KN K  SPVTLLER REAVFR IML A SKAS+HH  H +     +   V RR   Y  AD HH+EAVADCIEFIKKK+
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA

A0A7J8XH78 Uncharacterized protein2.6e-1462.03Show/hide
Query:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA
        KN K  SPVTLLER REAVFR IML A SKAS+HH  H       +   V RR   Y  AD HH+EAVADCIEFIKKK+
Subjt:  KNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGGCAAGGCTCCGTCGCCGGTGACTCTGCTGGAGCGCCTCCGTGAGGCCGTGTTTCGTTTCATAATGCTCTGTGCTTTTTCAAAGGCCTCAAATCACCATCG
CAGCCATCCCGCCGGAGCTGGTTTCCCGGCCGATGATGACGTCATGAGGCGGCGGCACTCGTACCAAAACGCCGACCACCACCACAGCGAGGCCGTCGCCGATTGCATCG
AGTTTATTAAGAAGAAGGCGTATTCCGACCACGAGGTGATGTGGATCGACGGACGCCAATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGGCAAGGCTCCGTCGCCGGTGACTCTGCTGGAGCGCCTCCGTGAGGCCGTGTTTCGTTTCATAATGCTCTGTGCTTTTTCAAAGGCCTCAAATCACCATCG
CAGCCATCCCGCCGGAGCTGGTTTCCCGGCCGATGATGACGTCATGAGGCGGCGGCACTCGTACCAAAACGCCGACCACCACCACAGCGAGGCCGTCGCCGATTGCATCG
AGTTTATTAAGAAGAAGGCGTATTCCGACCACGAGGTGATGTGGATCGACGGACGCCAATGCTGACGTGGCCACGG
Protein sequenceShow/hide protein sequence
MKNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVMWIDGRQC