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Sed0025484 (gene) of Chayote v1 genome

Gene IDSed0025484
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG08:39023957..39024388
RNA-Seq ExpressionSed0025484
SyntenySed0025484
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573338.1 hypothetical protein SDJN03_27225, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4673.97Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP
        MA++FQE E IFSDRD CR+L REDG  G GGED+  +NCRR + AAPR   Y NRT  +GG Q+ KEMASSLPV IP+ IGRRMAEEDDE D EEM +P
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP

Query:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        PHVVAERR ARKMAFSVC+G GRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

XP_022955108.1 uncharacterized protein LOC111457175 [Cucurbita moschata]5.6e-4773.97Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP
        MA++FQE E IFSDRD CR+L REDG  G GGED+  +NCRR + AAPR   Y NRT  +GG Q+ KEMASSLPV IP+ IGRRM EEDDE D EEM +P
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP

Query:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        PHVVAERR ARKMAFSVC+GNGRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

XP_022994916.1 uncharacterized protein LOC111490497 [Cucurbita maxima]2.3e-4875.34Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP
        MA++FQE E IFSDRD CR+L REDG  G GGED+  +NCRR + AAPR   Y NRT  +GG Q+ KEMASSLPV IP+ IGRRMAEEDDE DGEEM +P
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP

Query:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        PHVVAERR ARKMAFSVC+GNGRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

XP_023541188.1 uncharacterized protein LOC111801423 [Cucurbita pepo subsp. pepo]1.9e-4774.66Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP
        MA++FQE E IFSDRD CR+L REDG  G GGED+  +NCRR + AAPR   Y NRT  +GG Q+ KEMASSLPV IP+ IGRRMAEEDDE D EEM +P
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP

Query:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        PHVVAERR ARKMAFSVC+GNGRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

XP_038895158.1 uncharacterized protein LOC120083461 [Benincasa hispida]2.9e-4369.23Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV
        MA++FQE + IFSD  +CR+L R+D DD G     +N RR IVAAPR  Y +RT  DGGR +KKE+A SLPVRIPERI RR+++EDDE DGEE+ +PPH+
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV

Query:  VAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        VAERR A KMAFSVC+GNGRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  VAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

TrEMBL top hitse value%identityAlignment
A0A5A7UU57 Uncharacterized protein6.3e-3663.95Show/hide
Query:  MAKKFQELEAIFSD-RDYCRHLRREDGDDGGGGEDYYNCRRAIV-AAPRRMYRNRTASDGG--RQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMAL
        MA++FQE E IFSD RD+ R+LRR+D D        +N RR I+ A PR  Y +RT    G  R +KKE+A SLPVRIPER   R AEEDD+ D EE+ +
Subjt:  MAKKFQELEAIFSD-RDYCRHLRREDGDDGGGGEDYYNCRRAIV-AAPRRMYRNRTASDGG--RQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMAL

Query:  PPHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        PPH+V ERR ARKMAFSVC+GNGRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  PPHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

A0A6J1EK43 uncharacterized protein LOC1114340571.0e-4168.28Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYY--NCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPP
        MA++FQE E IFSD D+ R+L R D DD   GED++  NCR  +V APR  Y+ RT  DGGR +KK MASSLPV IPER  RR  EE+DE D EEM +PP
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYY--NCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPP

Query:  HVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        HVVAERR A KMAFSVC+GNGRTLKGRDL RVRN+ILRMTGFLET
Subjt:  HVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

A0A6J1GT17 uncharacterized protein LOC1114571752.7e-4773.97Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP
        MA++FQE E IFSDRD CR+L REDG  G GGED+  +NCRR + AAPR   Y NRT  +GG Q+ KEMASSLPV IP+ IGRRM EEDDE D EEM +P
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP

Query:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        PHVVAERR ARKMAFSVC+GNGRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

A0A6J1K0L5 uncharacterized protein LOC1114904971.1e-4875.34Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP
        MA++FQE E IFSDRD CR+L REDG  G GGED+  +NCRR + AAPR   Y NRT  +GG Q+ KEMASSLPV IP+ IGRRMAEEDDE DGEEM +P
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDY--YNCRRAIVAAPRR-MYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALP

Query:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        PHVVAERR ARKMAFSVC+GNGRTLKGRDLSRVRN+ILRMTGFLET
Subjt:  PHVVAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

A0A6J1KMV6 uncharacterized protein LOC1114956066.9e-4367.83Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV
        MA++FQE E IFSD D+CR+L   D DD G     +NCR  +V  PR  Y+ RT  DGGR +KK MASSLPV IPER  RR  EE+DETD EEM +PPHV
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV

Query:  VAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET
        VAERR A KMAFSVC+GNGRTLKGRDL RVRN+ILRMTGFLET
Subjt:  VAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29640.1 Protein of unknown function, DUF5845.3e-1944.9Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGE--DY-YNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEED-DETDGEEMAL
        M+++F E E IFSD +Y    RREDG++       D+  N  R    + RR       S          +SSLPV IP R  R   EE+  + DG    +
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGE--DY-YNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEED-DETDGEEMAL

Query:  PPHVVAERR-GARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE
        PPH++  RR    +MAFSVC+GNGRTLKGRDLSRVRN++L++TGFLE
Subjt:  PPHVVAERR-GARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE

AT2G34340.1 Protein of unknown function, DUF5843.1e-1943.33Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRR-MAEEDDETDGEEMA----
        MA++F E E +FSD      +  ++ ++   G D    +       RR+ R  T        K  ++SSLPV IPE I RR + +E+DE   EE +    
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRR-MAEEDDETDGEEMA----

Query:  --LPPHVVAERR-GARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE
          +PPH++  RR    +MAFSVCSG+GRTLKGRDLSRVRN++LR+TGFLE
Subjt:  --LPPHVVAERR-GARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE

AT3G45210.1 Protein of unknown function, DUF5842.4e-1140Show/hide
Query:  DYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPE------RIGRRMAEEDDETDGEEMALPPHVVAERRGARKMAFSVCSGNGRTLKGRDL
        D Y+ R       R++  +   S     T   +ASSLP+ +        +  R+  E DD  DG E  LPPH    +   R  +FSV  G GRTLKGRD+
Subjt:  DYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPE------RIGRRMAEEDDETDGEEMALPPHVVAERRGARKMAFSVCSGNGRTLKGRDL

Query:  SRVRNTILRMTGFLE
        SRVRN IL  TGFL+
Subjt:  SRVRNTILRMTGFLE

AT4G18980.1 AtS40-33.9e-1441.26Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV
        M+++FQE E IFSD  +     R+D       E+Y                        + T+K+  SS PVRIP R   R  EE+ E        PPHV
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV

Query:  VAE-RRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE
        + E RR   +MAFS C     TLKGRDLSR RNT+LRMTGFLE
Subjt:  VAE-RRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE

AT5G45630.1 Protein of unknown function, DUF5848.7e-1435.92Show/hide
Query:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV
        M+++FQE + IFSD+                       + +  +   ++Y +R     G +  +    + PVRIP    R +  E D T+ E+   PPHV
Subjt:  MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHV

Query:  VAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE
        + ERR   ++AFS C     TLKGRDLSR RN++LRMTGFLE
Subjt:  VAERRGARKMAFSVCSGNGRTLKGRDLSRVRNTILRMTGFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAAAATTTCAGGAATTGGAAGCGATTTTCTCCGACCGCGACTACTGCCGCCACCTCCGCCGTGAAGACGGCGATGACGGCGGCGGCGGCGAGGATTACTACAA
CTGCCGCCGCGCTATTGTAGCGGCGCCGCGAAGGATGTACCGCAACCGGACGGCGAGCGACGGAGGACGGCAAACTAAGAAGGAAATGGCGAGTTCGCTTCCGGTGAGGA
TTCCGGAACGAATCGGGCGGAGGATGGCGGAGGAAGACGATGAGACGGACGGAGAGGAAATGGCTCTGCCGCCGCACGTGGTGGCGGAGAGGCGAGGGGCCAGGAAAATG
GCGTTCTCTGTTTGCTCCGGCAACGGGAGGACGTTGAAGGGACGTGACCTGAGCCGAGTTCGGAATACGATCCTTCGGATGACCGGATTCTTGGAAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAAAATTTCAGGAATTGGAAGCGATTTTCTCCGACCGCGACTACTGCCGCCACCTCCGCCGTGAAGACGGCGATGACGGCGGCGGCGGCGAGGATTACTACAA
CTGCCGCCGCGCTATTGTAGCGGCGCCGCGAAGGATGTACCGCAACCGGACGGCGAGCGACGGAGGACGGCAAACTAAGAAGGAAATGGCGAGTTCGCTTCCGGTGAGGA
TTCCGGAACGAATCGGGCGGAGGATGGCGGAGGAAGACGATGAGACGGACGGAGAGGAAATGGCTCTGCCGCCGCACGTGGTGGCGGAGAGGCGAGGGGCCAGGAAAATG
GCGTTCTCTGTTTGCTCCGGCAACGGGAGGACGTTGAAGGGACGTGACCTGAGCCGAGTTCGGAATACGATCCTTCGGATGACCGGATTCTTGGAAACGTGA
Protein sequenceShow/hide protein sequence
MAKKFQELEAIFSDRDYCRHLRREDGDDGGGGEDYYNCRRAIVAAPRRMYRNRTASDGGRQTKKEMASSLPVRIPERIGRRMAEEDDETDGEEMALPPHVVAERRGARKM
AFSVCSGNGRTLKGRDLSRVRNTILRMTGFLET