; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025558 (gene) of Chayote v1 genome

Gene IDSed0025558
OrganismSechium edule (Chayote v1)
DescriptionRPM1-interacting protein 4-like
Genome locationLG08:37578260..37579561
RNA-Seq ExpressionSed0025558
SyntenySed0025558
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152507.2 protein NOI4 [Cucumis sativus]3.1e-2880.52Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKK TTGT  NMV  + NEP++NNESYP  PP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]1.4e-2880.52Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TTG   NMV  + NEP++NNESYP  PP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

XP_022954832.1 RPM1-interacting protein 4-like [Cucurbita moschata]1.7e-2984.42Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKK TTG+  NMVS QSNEP YNNES+P SPP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

XP_022994173.1 RPM1-interacting protein 4-like [Cucurbita maxima]1.4e-2883.12Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MA QDKG PLPKFGEWDVNNPASAEGFTVIFNKAR+EKK TTG+  NMVS QSNEP YNNES+P SPP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]1.8e-2881.82Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TTGT  N V  Q +EP++NNESYP  PP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein1.5e-2880.52Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKK TTGT  NMV  + NEP++NNESYP  PP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

A0A1S3AYE6 RPM1-interacting protein 4 isoform X28.4e-2777.33Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        + D+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TTG   NMV  + NEP++NNESYP  PP KK+WFCCG
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

A0A1S3AZ04 RPM1-interacting protein 4 isoform X16.8e-2980.52Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TTG   NMV  + NEP++NNESYP  PP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

A0A6J1GRZ4 RPM1-interacting protein 4-like8.1e-3084.42Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKK TTG+  NMVS QSNEP YNNES+P SPP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

A0A6J1K4F5 RPM1-interacting protein 4-like6.8e-2983.12Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG
        MA QDKG PLPKFGEWDVNNPASAEGFTVIFNKAR+EKK TTG+  NMVS QSNEP YNNES+P SPP KK+WFCCG
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG

SwissProt top hitse value%identityAlignment
O22633 Protein NOI43.7e-1660.81Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT--TTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCC
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT    G+P      +S+E    +     S P+ KKW CC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT--TTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCC

Q8GYN5 RPM1-interacting protein 43.5e-0640.62Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHS
        S +K   +PKFG+WD NNP+SA+G+T IFNK R E+ +        VS  S  P + +   P++
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHS

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein4.1e-1863.89Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCC
        DKGRPLPKFGEWDVN+P+SAEGFTVIFNKARNEKK    +     SP  +EP YN        P  KKWFCC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCC

AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein2.0e-1752.87Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEK---KTTTGTPLNMVSPQSN-EPIYNNESYPH--------SPPRKKKWFC
        MA+ ++ RPLPKFGEWD  NP SAEGFTVIFNKAR++K   KT    P ++VSP  N EP  NN ++ H        +P  KKKW C
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEK---KTTTGTPLNMVSPQSN-EPIYNNESYPH--------SPPRKKKWFC

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein9.5e-1591.89Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.0e-1760Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT--TTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCC
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT    G+P      +S+E    +     S P+ KKW CC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT--TTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein8.3e-1958.44Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGT---PLNMVSPQSNE-PIYNNESYPHSPPRKKKWFC
        +++KG+PLPKFGEWDVNNPASAEGFTVIF+KA +EKKT   +   P ++VSPQ N+    NN     +P  K KWFC
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGT---PLNMVSPQSNE-PIYNNESYPHSPPRKKKWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCAGGACAAGGGTCGACCACTGCCAAAGTTTGGTGAATGGGACGTAAATAACCCTGCATCTGCAGAAGGATTTACGGTCATATTTAACAAGGCTAGAAATGA
GAAGAAAACAACCACTGGAACTCCTCTCAATATGGTTTCACCACAAAGTAATGAACCAATCTATAACAATGAAAGCTACCCTCATTCTCCTCCACGCAAGAAAAAGTGGT
TTTGCTGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGCAGGACAAGGGTCGACCACTGCCAAAGTTTGGTGAATGGGACGTAAATAACCCTGCATCTGCAGAAGGATTTACGGTCATATTTAACAAGGCTAGAAATGA
GAAGAAAACAACCACTGGAACTCCTCTCAATATGGTTTCACCACAAAGTAATGAACCAATCTATAACAATGAAAGCTACCCTCATTCTCCTCCACGCAAGAAAAAGTGGT
TTTGCTGTGGTTGA
Protein sequenceShow/hide protein sequence
MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTTGTPLNMVSPQSNEPIYNNESYPHSPPRKKKWFCCG