; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025593 (gene) of Chayote v1 genome

Gene IDSed0025593
OrganismSechium edule (Chayote v1)
DescriptionActin-related T1
Genome locationLG04:28080493..28084534
RNA-Seq ExpressionSed0025593
SyntenySed0025593
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442705.1 PREDICTED: uncharacterized protein LOC103486497 [Cucumis melo]8.9e-5290.91Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+DHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
XP_022144660.1 uncharacterized protein LOC111014295 [Momordica charantia]1.5e-5496.97Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+DHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
XP_023529054.1 uncharacterized protein LOC111791803 [Cucurbita pepo subsp. pepo]1.5e-5192.93Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFSVLTW NPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+ HRDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
XP_031397992.1 uncharacterized protein LOC116208603 [Punica granatum]3.1e-5291.92Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADP+RFVNIWIGSAAFS LTWFNPYMWQL+NQFNWHDKAFLFEQYHWKKA  KNQPY+FKWN+YMD+DHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
XP_038903427.1 uncharacterized protein LOC120090020 [Benincasa hispida]1.2e-5394.95Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFSV TWFNPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+DHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
TrEMBL top hitse value%identityAlignment
A0A1S3B6B6 uncharacterized protein LOC1034864974.3e-5290.91Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+DHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
A0A6J1CS98 uncharacterized protein LOC1110142957.1e-5596.97Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+DHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
A0A6J1F2Q8 uncharacterized protein LOC1114418429.6e-5291.92Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFS+LTW NPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+ HRDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
A0A6J1J1C9 uncharacterized protein LOC1114817999.6e-5291.92Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFS+LTW NPYMWQLSNQFNWHDKAFLFEQYHWKKA +KNQPYQFKWNQYMD+ HRDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
A0A6P8DKX4 uncharacterized protein LOC1162086031.5e-5291.92Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADP+RFVNIWIGSAAFS LTWFNPYMWQL+NQFNWHDKAFLFEQYHWKKA  KNQPY+FKWN+YMD+DHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09860.1 unknown protein3.2e-4782.83Show/hide
Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHAD DRFVNIWIGSAAFSVLTW NPYMWQLSNQFN+HDK  LFEQYHWKKA  K QPY+FKWN+ + ++ RDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGTATTTCGGAAACGCTTACAGAGGCGACCCTGGAGTTCCACACGCGGACCCTGATCGGTTCGTGAACATTTGGATTGGATCCGCCGCCTTCTCTGTTCTTAC
CTGGTTCAATCCCTACATGTGGCAGCTCTCTAATCAATTCAATTGGCATGACAAAGCATTTTTATTTGAGCAATACCACTGGAAAAAGGCCCTTAAAAAGAATCAGCCCT
ACCAGTTCAAGTGGAATCAGTACATGGACAGAGACCACCGGGATTCCTACTACTTTAACTGGCCCGTGTACTTTCCTTAG
mRNA sequenceShow/hide mRNA sequence
GAAGTGCGGCAGTGGGTGGGGGGGAAGAAATGGAGAAGTATTTCGGAAACGCTTACAGAGGCGACCCTGGAGTTCCACACGCGGACCCTGATCGGTTCGTGAACATTTGG
ATTGGATCCGCCGCCTTCTCTGTTCTTACCTGGTTCAATCCCTACATGTGGCAGCTCTCTAATCAATTCAATTGGCATGACAAAGCATTTTTATTTGAGCAATACCACTG
GAAAAAGGCCCTTAAAAAGAATCAGCCCTACCAGTTCAAGTGGAATCAGTACATGGACAGAGACCACCGGGATTCCTACTACTTTAACTGGCCCGTGTACTTTCCTTAGG
CTCTCTGATTATGTCTCAATTTTGTGGACTATTTTTTTTTTTTTTTTGAAATAAGGGTAACCACGCCCGTCCATAAGCCAGACACCGGAGACATTGAAGGAGTAATGTCA
CAGTTAAGTCTTGAACTTCGGATCTTGAGGGGAGCATACCCTCAAAGTCCAAGTCTTGAACGGGGACTACTTTTTTTTGTATGTCAGTTATTTAAAAAAATGGTGGCAAA
AGTTAGGAGGACATTTTATACCATAGTGCATGAAACTTGGTGCCCCGACCCCAAATGAGATGCTCTCCCTCTCTCATGATTAGTGGACAACTATAGTCCAAGTCTCTCTT
TCAAAATAATAATAATAATAATAATGACAATCCAAGACTTTCACGTTTGTGTATATTTGGTCTCTAAGGCCCTCTAGATAAATATGTTTGTTTTTAGGTCTGGTTTGATA
ATTATTTTATTTTTAGTTTTTAAAATTTAAG
Protein sequenceShow/hide protein sequence
MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKALKKNQPYQFKWNQYMDRDHRDSYYFNWPVYFP