CuGenDBv2

Gene ID	Sed0025597
Organism	Sechium edule (Chayote v1)
Description	late embryogenesis abundant protein At1g64065
Genome location	LG05:5697242..5697844
RNA-Seq Expression	Sed0025597
Synteny	Sed0025597
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008437351.1 PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]

1.2e-66

67.86

Show/hide

Query:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY
        DRP   RS RK+S+KC+N FCICLF  AA   IAAL  GLV++RVKTPTVKLT+VAV NLHYGFSPTPFM+ATL  E+ +ENPN+G FEYE   NVTLIY
Subjt:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY

Query:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL
        YGV VGIGEV+++ VNAK +++  F VKVK N  FV+VDYFS DLARLK+MNMSW  EF+G+  LLKLFKE K+ V+KC+ +LNLTSH VQNL CL
Subjt:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL

XP_022145906.1 late embryogenesis abundant protein At1g64065 [Momordica charantia]

9.9e-66

67.69

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Query:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY
        DRPATLRS R+ SE+CIN  CI LF  AA   +A L +GL +VRVKTPT KL++VAV NL YGFSP PF+DATL+AE+ IENPNFG F+YEE T+ + IY
Subjt:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY

Query:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        YGVA GIGEV++V VNAKGVK T+F+V+VK N+S  DVDY S+DLA LK MNMS I EF+GR RLLKLFKE KV +LKCTMTLN +SHA+ NL C
Subjt:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

XP_022929131.1 late embryogenesis abundant protein At1g64065 [Cucurbita moschata]

1.2e-76

77.55

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Query:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI
        +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V NLHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLI
Subjt:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI

Query:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        YYGVAVGIGEV+ V VNAK  K+ NF VKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKCTM+LNL SH VQNL C
Subjt:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

XP_022970100.1 late embryogenesis abundant protein At1g64065 [Cucurbita maxima]

2.5e-77

78.06

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Query:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI
        +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V NLHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLI
Subjt:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI

Query:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        YYGVAVGIGEV+ V VNAK  K  NFTVKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKCTM+LNL+SH VQNL C
Subjt:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

XP_023550526.1 late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]

1.9e-77

78.06

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Query:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI
        +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V NLHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLI
Subjt:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI

Query:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        YYGVAVGIGEV+ V VNAK  K+ NFTVKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKCTM+LNL+SH VQNL C
Subjt:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AUE7 late embryogenesis abundant protein At1g64065

5.6e-67

67.86

Show/hide

Query:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY
        DRP   RS RK+S+KC+N FCICLF  AA   IAAL  GLV++RVKTPTVKLT+VAV NLHYGFSPTPFM+ATL  E+ +ENPN+G FEYE   NVTLIY
Subjt:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY

Query:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL
        YGV VGIGEV+++ VNAK +++  F VKVK N  FV+VDYFS DLARLK+MNMSW  EF+G+  LLKLFKE K+ V+KC+ +LNLTSH VQNL CL
Subjt:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL

A0A5A7TMT1 Late embryogenesis abundant protein

5.6e-67

67.86

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Query:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY
        DRP   RS RK+S+KC+N FCICLF  AA   IAAL  GLV++RVKTPTVKLT+VAV NLHYGFSPTPFM+ATL  E+ +ENPN+G FEYE   NVTLIY
Subjt:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY

Query:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL
        YGV VGIGEV+++ VNAK +++  F VKVK N  FV+VDYFS DLARLK+MNMSW  EF+G+  LLKLFKE K+ V+KC+ +LNLTSH VQNL CL
Subjt:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL

A0A6J1CXS7 late embryogenesis abundant protein At1g64065

4.8e-66

67.69

Show/hide

Query:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY
        DRPATLRS R+ SE+CIN  CI LF  AA   +A L +GL +VRVKTPT KL++VAV NL YGFSP PF+DATL+AE+ IENPNFG F+YEE T+ + IY
Subjt:  DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIY

Query:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        YGVA GIGEV++V VNAKGVK T+F+V+VK N+S  DVDY S+DLA LK MNMS I EF+GR RLLKLFKE KV +LKCTMTLN +SHA+ NL C
Subjt:  YGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

A0A6J1EM85 late embryogenesis abundant protein At1g64065

6.0e-77

77.55

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Query:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI
        +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V NLHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLI
Subjt:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI

Query:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        YYGVAVGIGEV+ V VNAK  K+ NF VKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKCTM+LNL SH VQNL C
Subjt:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

A0A6J1I1W2 late embryogenesis abundant protein At1g64065

1.2e-77

78.06

Show/hide

Query:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI
        +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V NLHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLI
Subjt:  DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLI

Query:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        YYGVAVGIGEV+ V VNAK  K  NFTVKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKCTM+LNL+SH VQNL C
Subjt:  YYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

SwissProt top hits

e value

%identity

Alignment

Q6DST1 Late embryogenesis abundant protein At1g64065

1.7e-12

33.16

Show/hide

Query:  RSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPT-PFMDATLVAEMAIENPNFGRFEYEEET-NVTLIYYGVA
        R T +   KC+    +   T+  I     L +  + +R+  P ++  +++  +L  G + T P+ +ATLV++++I N NFG FE+E+ T  V    +GV 
Subjt:  RSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPT-PFMDATLVAEMAIENPNFGRFEYEEET-NVTLIYYGVA

Query:  VGIGEVRKVRVNAKGVKETNFTVKVKENSSF--VDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        VG  ++   RV A   K    T  V E  SF  +D      DL RL  + +  + E +GR ++L   K  KV V+ CTM LNLT   +QNL C
Subjt:  VGIGEVRKVRVNAKGVKETNFTVKVKENSSF--VDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

Arabidopsis top hits

e value

%identity

Alignment

AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

1.2e-13

33.16

Show/hide

Query:  RSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPT-PFMDATLVAEMAIENPNFGRFEYEEET-NVTLIYYGVA
        R T +   KC+    +   T+  I     L +  + +R+  P ++  +++  +L  G + T P+ +ATLV++++I N NFG FE+E+ T  V    +GV 
Subjt:  RSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPT-PFMDATLVAEMAIENPNFGRFEYEEET-NVTLIYYGVA

Query:  VGIGEVRKVRVNAKGVKETNFTVKVKENSSF--VDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        VG  ++   RV A   K    T  V E  SF  +D      DL RL  + +  + E +GR ++L   K  KV V+ CTM LNLT   +QNL C
Subjt:  VGIGEVRKVRVNAKGVKETNFTVKVKENSSF--VDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

AT2G44000.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

5.0e-07

28.49

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Query:  ICLFTVAAITAIAALFIGLVIVRVKTP-TVKLTAVAVTNLHY----GFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVN
        I +F +A +  +  +FI +    +  P T  LT+V V NL Y      S + + +ATL  E+ IENPN G FE+       ++Y G  VG   +   RV 
Subjt:  ICLFTVAAITAIAALFIGLVIVRVKTP-TVKLTAVAVTNLHY----GFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVN

Query:  AKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC
        + G   T  + +V    +     +  +D+ R + + +    + +G   L  L K  +   LKC M LNL+   +  L C
Subjt:  AKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTTGGACGACCGGCCGGCGACACTACGATCAACCCGAAAAACATCCGAAAAATGCATCAACACCTTCTGCATTTGCCTCTTTACCGTCGCCGCCATCACCGCGAT
CGCGGCGCTGTTTATCGGCCTCGTCATCGTCCGAGTAAAAACCCCAACAGTAAAACTAACCGCCGTGGCAGTAACAAATCTCCACTATGGCTTCTCCCCAACCCCTTTTA
TGGACGCGACATTAGTCGCCGAAATGGCAATCGAGAATCCGAATTTCGGGCGGTTCGAGTACGAGGAAGAAACGAACGTGACACTGATCTACTACGGCGTGGCGGTCGGG
ATCGGCGAGGTGAGGAAGGTGCGTGTAAATGCAAAGGGCGTTAAAGAAACGAACTTTACGGTGAAAGTGAAAGAAAATTCGAGCTTTGTGGACGTGGATTATTTCAGCCA
CGATTTGGCGAGGTTGAAGTCGATGAATATGAGTTGGATCGGCGAGTTTAAGGGAAGGGCTCGTTTGTTGAAATTGTTTAAGGAAAGCAAAGTTTGTGTTTTGAAATGCA
CTATGACCTTGAATTTGACCTCCCATGCGGTCCAAAATCTTAATTGCTTATAG

mRNA sequence

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Protein sequence

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MALDDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVG
IGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL

Sed0025597 (gene) of Chayote v1 genome