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Sed0025610 (gene) of Chayote v1 genome

Gene IDSed0025610
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:41983430..41984239
RNA-Seq ExpressionSed0025610
SyntenySed0025610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064333.1 hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa]8.6e-1250.39Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQ--SALESSKLLDRKPP-SRDWIPRLDGGFRIEVRGKQP-EGFEDAYEMIESGSDVEDSD
        MASRLI  +IK P+ FLLR PASSAP AQ IQNLL PIP Q  S          +P  S  +   +DGGFRIEVRGKQ    ++D    I+S  + E  D
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQ--SALESSKLLDRKPP-SRDWIPRLDGGFRIEVRGKQP-EGFEDAYEMIESGSDVEDSD

Query:  EFGSDDDDESGGDFYDNDDAEPRDDED
         F SDDD     DF+D D+ EP+DD+D
Subjt:  EFGSDDDDESGGDFYDNDDAEPRDDED

KAE8649846.1 hypothetical protein Csa_012085 [Cucumis sativus]2.5e-1151.97Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQS---ALESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEM-IESGSDVEDSD
        MASRLI  +IKAP+ FLLR PASSAP AQ IQNLL PIP QS    L      DR   S      +DGGFRIEVRG+Q    +D   M ++S S+ E SD
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQS---ALESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEM-IESGSDVEDSD

Query:  EFGSDDDDESGGDFYDNDDAEPRDDED
        E     DDE     YD +D EP+DD+D
Subjt:  EFGSDDDDESGGDFYDNDDAEPRDDED

KAG6591964.1 hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sororia]5.8e-1656.35Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE
        MASR I  ++KAPI+FLLR PASS PLAQ+I N L P P QSA   L    L DR    R +    DGGFRIEVRGKQ    ED  E  ES SD E SD 
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE

Query:  FGSDDDDE-SGGDFYDNDDAEPRDDE
           +  +E SGGDF D+DDAEP DDE
Subjt:  FGSDDDDE-SGGDFYDNDDAEPRDDE

XP_022936831.1 uncharacterized protein LOC111443300 [Cucurbita moschata]7.0e-1451.97Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE
        MASR I  ++KAPI+FLLR PASS PLAQ+I N L P P QSA   L    L DR    R +    DGGFRIEVRGKQ    ED  E  +S SD E SD 
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE

Query:  FGSDDDDESGGDFY--DNDDAEPRDDE
        +  +  +E  GD +  D+DDAEP DD+
Subjt:  FGSDDDDESGGDFY--DNDDAEPRDDE

XP_022976605.1 uncharacterized protein LOC111476951 [Cucurbita maxima]2.6e-1656.35Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE
        MASR I  ++KAPI+ LLR PASS PLAQ+IQN L P P QSA   L    L DR    R +    DGGFRIEVRGKQ    ED  E  ES SD+E SD 
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE

Query:  FGSDDDDE-SGGDFYDNDDAEPRDDE
        F  +  +E S  DF D+DDAEPRDDE
Subjt:  FGSDDDDE-SGGDFYDNDDAEPRDDE

TrEMBL top hitse value%identityAlignment
A0A0A0L3F1 Uncharacterized protein3.8e-0576.19Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQS
        MASRLI  +IKAP+ FLLR PASSAP AQ IQNLL PIP QS
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQS

A0A5A7V875 Uncharacterized protein4.2e-1250.39Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQ--SALESSKLLDRKPP-SRDWIPRLDGGFRIEVRGKQP-EGFEDAYEMIESGSDVEDSD
        MASRLI  +IK P+ FLLR PASSAP AQ IQNLL PIP Q  S          +P  S  +   +DGGFRIEVRGKQ    ++D    I+S  + E  D
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQ--SALESSKLLDRKPP-SRDWIPRLDGGFRIEVRGKQP-EGFEDAYEMIESGSDVEDSD

Query:  EFGSDDDDESGGDFYDNDDAEPRDDED
         F SDDD     DF+D D+ EP+DD+D
Subjt:  EFGSDDDDESGGDFYDNDDAEPRDDED

A0A6J1F8K5 uncharacterized protein LOC1114433003.4e-1451.97Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE
        MASR I  ++KAPI+FLLR PASS PLAQ+I N L P P QSA   L    L DR    R +    DGGFRIEVRGKQ    ED  E  +S SD E SD 
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE

Query:  FGSDDDDESGGDFY--DNDDAEPRDDE
        +  +  +E  GD +  D+DDAEP DD+
Subjt:  FGSDDDDESGGDFY--DNDDAEPRDDE

A0A6J1IJY0 uncharacterized protein LOC1114769511.3e-1656.35Show/hide
Query:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE
        MASR I  ++KAPI+ LLR PASS PLAQ+IQN L P P QSA   L    L DR    R +    DGGFRIEVRGKQ    ED  E  ES SD+E SD 
Subjt:  MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSA---LESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDE

Query:  FGSDDDDE-SGGDFYDNDDAEPRDDE
        F  +  +E S  DF D+DDAEPRDDE
Subjt:  FGSDDDDE-SGGDFYDNDDAEPRDDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAGGTTGATTCCCAACAACATCAAAGCCCCCATCCATTTCCTCCTTCGCATCCCGGCCTCATCCGCTCCATTAGCACAAACCATCCAAAACCTTCTACCTCC
AATTCCGATCCAGTCCGCTCTGGAATCCTCCAAATTACTCGATCGGAAGCCGCCGTCTCGGGATTGGATACCGAGATTGGACGGCGGATTCAGGATCGAGGTCAGAGGGA
AGCAGCCGGAGGGATTCGAAGACGCATATGAGATGATCGAGAGCGGGAGTGACGTTGAGGATTCCGATGAATTCGGCAGCGATGATGACGATGAGTCCGGTGGGGACTTT
TATGACAACGACGACGCCGAGCCTCGCGATGATGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
CAAATCTGGACAATTCTTAAACCGGTCGGTTCAAGCGAAGAGCGGCCCAAATTTCAAAACCGACCTTTCCAAAATCCAAAAACCCTAAACCCTTTTTCTGTAGCCGCGCT
CTATAAAGCCCATTTTCATCTCCATCATCATTCATTTCGTCACTTTCCAATTCTCACTCTCAATCTTCAACCTCCTTCAATGGCTTCCAGGTTGATTCCCAACAACATCA
AAGCCCCCATCCATTTCCTCCTTCGCATCCCGGCCTCATCCGCTCCATTAGCACAAACCATCCAAAACCTTCTACCTCCAATTCCGATCCAGTCCGCTCTGGAATCCTCC
AAATTACTCGATCGGAAGCCGCCGTCTCGGGATTGGATACCGAGATTGGACGGCGGATTCAGGATCGAGGTCAGAGGGAAGCAGCCGGAGGGATTCGAAGACGCATATGA
GATGATCGAGAGCGGGAGTGACGTTGAGGATTCCGATGAATTCGGCAGCGATGATGACGATGAGTCCGGTGGGGACTTTTATGACAACGACGACGCCGAGCCTCGCGATG
ATGAGGATTGATCGAGATATGTCCTCTACTCTCTCTTTGGATTTTATTGATTTCAGGTTATGAATTGATCATGATTTTGTTCGAAATTTTGGTTTCTGTCGAACTCAGTT
CTTCGTCTTCTTCGAGCCTGCAATTTTTAGTTTCGTTTAGTTTTTTTTTTTCTTTCTTTTTTTGGGTTAGTTTTCATGAATATTGCCGTATTGTAGCTGTTTTTCTTGGT
TGGACAAGTCGATTTGTTTAAATTAAATTTATAAGCAGTA
Protein sequenceShow/hide protein sequence
MASRLIPNNIKAPIHFLLRIPASSAPLAQTIQNLLPPIPIQSALESSKLLDRKPPSRDWIPRLDGGFRIEVRGKQPEGFEDAYEMIESGSDVEDSDEFGSDDDDESGGDF
YDNDDAEPRDDED