CuGenDBv2

Gene ID	Sed0025615
Organism	Sechium edule (Chayote v1)
Description	Auxin response factor
Genome location	LG09:36125874..36130583
RNA-Seq Expression	Sed0025615
Synteny	Sed0025615
Gene Ontology terms	GO:0003855 - 3-dehydroquinate dehydratase activity (molecular function) GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022150155.1 uncharacterized protein LOC111018405 [Momordica charantia]

6.6e-77

80.77

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLIL+PAS  VS++NSS FCSDF +PF +  RA+NFRAS PQ LH NG R  +   RSY RYGPPYGEEDDDPE QV+SLRVPDDWSVP+KALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNVEIS++AANSYY SLLEK TDLGDILL MARELESISYKESFHGAF SANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_022959936.1 uncharacterized protein LOC111460840 [Cucurbita moschata]

1.4e-74

82.42

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLILVP+S  VSITNSS F SDF + F SR RA+NFRASSPQ L CN   + RL  RSY+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDEEYCPEETNVEISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_023004672.1 uncharacterized protein LOC111497897 [Cucurbita maxima]

3.6e-75

82.42

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLILVP+S  VSITNSS F SDF++ F SR R +NFRASSPQ L CN F + RL  RSY+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDEEYCPEETNVEISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_023515033.1 uncharacterized protein LOC111779179 [Cucurbita pepo subsp. pepo]

8.1e-75

82.42

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLILVP+S  VSITNSS F SDF++ F SR RA+NFRASSPQ L CN   + RL  RSY+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDEEYCPEETNVEISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_038896861.1 uncharacterized protein LOC120085084 [Benincasa hispida]

3.9e-77

81.87

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLIL+PAS  V ITNSS FCS F+IPF SR RA+NF+   PQ LHCNG R  +   RSY+  GPPYGEEDDDPE QV+SLRVPDDWSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LR TLHKWLD+EYCPEETNVEISK+AANSYY SLL+K TDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BS97 uncharacterized protein LOC103492727

6.9e-72

78.57

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLIL+P S  VSITNSS F   F+  F+SR RA+NF    PQ LH NG    +  SRSY+R GPPYGEEDDDPE +V+SLRVPD+WSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNVEISK+AANSYY SLL+K TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A5D3D403 Uncharacterized protein

6.9e-72

78.57

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLIL+P S  VSITNSS F   F+  F+SR RA+NF    PQ LH NG    +  SRSY+R GPPYGEEDDDPE +V+SLRVPD+WSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNVEISK+AANSYY SLL+K TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A6J1D9Y8 uncharacterized protein LOC111018405

3.2e-77

80.77

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLIL+PAS  VS++NSS FCSDF +PF +  RA+NFRAS PQ LH NG R  +   RSY RYGPPYGEEDDDPE QV+SLRVPDDWSVP+KALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNVEIS++AANSYY SLLEK TDLGDILL MARELESISYKESFHGAF SANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A6J1H695 uncharacterized protein LOC111460840

6.7e-75

82.42

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLILVP+S  VSITNSS F SDF + F SR RA+NFRASSPQ L CN   + RL  RSY+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDEEYCPEETNVEISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A6J1KR31 uncharacterized protein LOC111497897

1.8e-75

82.42

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Query:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW
        MESLILVP+S  VSITNSS F SDF++ F SR R +NFRASSPQ L CN F + RL  RSY+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEW
Subjt:  MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDEEYCPEETNVEISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G03150.1 unknown protein

1.6e-41

69.37

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Query:  EEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSAN
        E ++D E+ VQ+L +P++W +PS+A+EESEWLRVTLHKWLD+EYCPE TNVEIS++AA SYY SLLEK +D+G+ILL MA++L SISY+ESFHGAF+SAN
Subjt:  EEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSAN

Query:  AAVNLIAQRIE
        AA+NLI  RIE
Subjt:  AAVNLIAQRIE

Sequences

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CDS sequence

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ATGGAGTCTCTGATCTTGGTTCCAGCCAGTACATGCGTTTCAATCACAAATTCCTCACAATTTTGCTCCGATTTCGCCATTCCATTCGCTTCTAGAATCCGCGCCCTCAA
CTTCAGAGCTTCTTCGCCGCAGTTTCTCCACTGCAATGGCTTCCGGCAGGGTCGATTAGCTTCAAGGTCTTATGTGCGGTATGGTCCGCCGTACGGTGAGGAAGACGACG
ACCCTGAAGCGCAGGTTCAAAGCCTTAGGGTTCCTGACGATTGGTCAGTTCCGTCCAAGGCGTTGGAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGTTAGAT
GAGGAGTACTGTCCAGAGGAAACTAATGTAGAAATAAGCAAGATTGCTGCAAATTCGTACTACTATTCTTTGTTAGAAAAGATTACGGATCTAGGCGATATTTTGTTGAA
TATGGCAAGAGAATTGGAATCTATTTCCTATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAGAATAGAGCTGTCTTAA

mRNA sequence

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GGAAAATCCTGCTAGCTGAGTGGTCGCTATATATTTCATTGGACCTTACAGACGAATCCTATCCACACATCACCATCGCTCTGCCATCAACTTCTACACCAATCTCAAAA
TCACAGAGAAACCGAACGAAAATGGAGTCTCTGATCTTGGTTCCAGCCAGTACATGCGTTTCAATCACAAATTCCTCACAATTTTGCTCCGATTTCGCCATTCCATTCGC
TTCTAGAATCCGCGCCCTCAACTTCAGAGCTTCTTCGCCGCAGTTTCTCCACTGCAATGGCTTCCGGCAGGGTCGATTAGCTTCAAGGTCTTATGTGCGGTATGGTCCGC
CGTACGGTGAGGAAGACGACGACCCTGAAGCGCAGGTTCAAAGCCTTAGGGTTCCTGACGATTGGTCAGTTCCGTCCAAGGCGTTGGAGGAATCAGAATGGCTTAGGGTT
ACCCTGCACAAATGGTTAGATGAGGAGTACTGTCCAGAGGAAACTAATGTAGAAATAAGCAAGATTGCTGCAAATTCGTACTACTATTCTTTGTTAGAAAAGATTACGGA
TCTAGGCGATATTTTGTTGAATATGGCAAGAGAATTGGAATCTATTTCCTATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTC
AAAGAATAGAGCTGTCTTAACTGTTTCTCTACCCTTCCATTTTCAAAGTTTATTACTAATTAATTTGTCTCTTTGGCTTTTCTTTCTTATGAGTAGCTCATCTATTGTCA
GATCTGTATTTCTGTACAAACAATTCATGTAATGCTCTTGTTCCTCAATGACAAAGCAACTTTCTGTGACTAAGTATGGATGTTCCATTTCCAAACACCAGATCTTGCAT
CGTTTCTCTTGCCAGGCACTATCATCCAGTTGTTCACACAAGGTCTAGCAACTGGGTCAATGGAGAAGTTGGTGGATGTAAAAATGAGGCAAGGCCATTGAGTTTCTAGA
AGATAATATTGGTTTATAATATTCTAGTTCGATTTAAAGGTAAGGGGCAGTTTCGTTAATAGAGGTTTGAAGTCTTCAAGGTACCTCCTTTGGTGGTCTTAAGTTTGAAA
CCTACTAAATTTAATTGTCAACTCCCTAGTTTTTTTTTTTATCGGATGGGATATGGGTGCCCTAAAGGTTTTTATTGAGCATGTTGGCCTCTATTCAATTATATTATGAT
GTGTTTAAACTTTTCGGACTTGACCTAGTGATCACAATGAACTTGTGGAACTATAATTTTATAAATATTTTTGTTGGCAA

Protein sequence

Show/hide protein sequence

MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLD
EEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

Sed0025615 (gene) of Chayote v1 genome