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Sed0025620 (gene) of Chayote v1 genome

Gene IDSed0025620
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:4244977..4246780
RNA-Seq ExpressionSed0025620
SyntenySed0025620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142869.1 uncharacterized protein LOC111012878 [Momordica charantia]4.5e-4182.57Show/hide
Query:  MPTAAESSASSSSSS--LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICF
        MP +A SS+SSSSSS  LEC +PTS SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS P + CSGYE  SKL++  KAWRKFVICF
Subjt:  MPTAAESSASSSSSS--LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICF

Query:  RGFWCSWNP
        RGFWCSWNP
Subjt:  RGFWCSWNP

XP_022942868.1 uncharacterized protein LOC111447770 [Cucurbita moschata]5.9e-4182.24Show/hide
Query:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG
        MP + ESS  SSS  ++CATPT  SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS P+D CSGYE LSKLE    AWRKFVICFRG
Subjt:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG

Query:  FWCSWNP
        FWCSWNP
Subjt:  FWCSWNP

XP_022983484.1 uncharacterized protein LOC111482071 [Cucurbita maxima]2.0e-4183.18Show/hide
Query:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG
        MP + ESS  SSS  +ECATPT  SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS P+D CSGYE LSKLE    AWRKFVICFRG
Subjt:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG

Query:  FWCSWNP
        FWCSWNP
Subjt:  FWCSWNP

XP_023516499.1 uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo]2.6e-4183.18Show/hide
Query:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG
        MP + ESS  SSS  +EC TPT  SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS PVD CSGYE LSKLE    AWRKFVICFRG
Subjt:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG

Query:  FWCSWNP
        FWCSWNP
Subjt:  FWCSWNP

XP_023552147.1 protein DSE2-like isoform X2 [Cucurbita pepo subsp. pepo]2.5e-3977.39Show/hide
Query:  MPTAAESSASSSSSS---------LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAW
        MPT+A+SS+SSSSSS         L+CATP S SVQLVSKS SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDS PVD CSGYE LSKLEN  KAW
Subjt:  MPTAAESSASSSSSS---------LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAW

Query:  RKFVICFRGFWCSWN
        RK + CF GFWCSWN
Subjt:  RKFVICFRGFWCSWN

TrEMBL top hitse value%identityAlignment
A0A6J1CMP9 uncharacterized protein LOC1110128782.2e-4182.57Show/hide
Query:  MPTAAESSASSSSSS--LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICF
        MP +A SS+SSSSSS  LEC +PTS SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS P + CSGYE  SKL++  KAWRKFVICF
Subjt:  MPTAAESSASSSSSS--LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICF

Query:  RGFWCSWNP
        RGFWCSWNP
Subjt:  RGFWCSWNP

A0A6J1EYJ9 uncharacterized protein LOC1114376031.2e-3474.77Show/hide
Query:  MPTAAESSASSSSSS-------LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRK
        MPT+A+SS+SSSSSS       L+CATP S SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDS P D CSGYE LSKLEN  KAWRK
Subjt:  MPTAAESSASSSSSS-------LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRK

Query:  FVICFRGFWCS
         + CF G  CS
Subjt:  FVICFRGFWCS

A0A6J1FVV1 uncharacterized protein LOC1114477702.8e-4182.24Show/hide
Query:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG
        MP + ESS  SSS  ++CATPT  SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS P+D CSGYE LSKLE    AWRKFVICFRG
Subjt:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG

Query:  FWCSWNP
        FWCSWNP
Subjt:  FWCSWNP

A0A6J1J4Z5 uncharacterized protein LOC111482673 isoform X26.1e-3680.77Show/hide
Query:  MPTAAESSASSSSSS--LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICF
        MPT+A+SS+SSSSSS  L+CATP S SVQLVSKS SDRLL KFFDAS+F+FDYEQSSLWSPPIPRRVFLDS P D CSGYE LSKLENV KAWRKF+ CF
Subjt:  MPTAAESSASSSSSS--LECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICF

Query:  RGFW
         GFW
Subjt:  RGFW

A0A6J1J7J0 uncharacterized protein LOC1114820719.8e-4283.18Show/hide
Query:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG
        MP + ESS  SSS  +ECATPT  SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS P+D CSGYE LSKLE    AWRKFVICFRG
Subjt:  MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRG

Query:  FWCSWNP
        FWCSWNP
Subjt:  FWCSWNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein1.2e-0445.45Show/hide
Query:  TSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS-LPVDDC
        T++ V+ +   +   LL KF D S F FDY QSSLWSP +PR     S L  D C
Subjt:  TSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDS-LPVDDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCGCCGCCGAATCTTCCGCTTCTTCCTCCTCTTCTTCTCTCGAATGCGCCACTCCGACGAGCCAGAGCGTTCAACTCGTGTCGAAATCGGTGTCGGATCGGCT
TCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCTCCGATTCCGCGGCGAGTGTTCCTCGATTCTTTGCCGGTCGATG
ATTGCTCCGGTTACGAGGCTCTCTCGAAGCTTGAGAATGTGGCGAAGGCGTGGAGGAAATTCGTCATCTGTTTCAGAGGATTCTGGTGTTCTTGGAATCCATGA
mRNA sequenceShow/hide mRNA sequence
CTTTGACCCCTTTATGAATTACATTTTGCATTTACCGAACGTTCACAATCCAAAAGGCGCGCTCTCAATTCCTTCATATACTCTGCAACTTCGCCGATAAGTTTCTCTTC
TCCGTCGCCTCTCCGATGCCAACCGCCGCCGAATCTTCCGCTTCTTCCTCCTCTTCTTCTCTCGAATGCGCCACTCCGACGAGCCAGAGCGTTCAACTCGTGTCGAAATC
GGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCTCCGATTCCGCGGCGAGTGTTCCTCGATT
CTTTGCCGGTCGATGATTGCTCCGGTTACGAGGCTCTCTCGAAGCTTGAGAATGTGGCGAAGGCGTGGAGGAAATTCGTCATCTGTTTCAGAGGATTCTGGTGTTCTTGG
AATCCATGATTTCACCTTACAACTCTTGAGCAGATCTCTCCCACTAAGATAAGGAAAAGAAGAGAAATTAGGTCTTTATTTTGAGTGTTCAGTTAATTGTATTCTTATAC
CATTGAAGAAAGAAGAAGAAGAAATCTATATGAATACTTCCATTTGTCATAAAAATGGAAATTATGAAGAATATTCACATTCTTTACCTTCTCATTTTCCAGTGTAGAAT
TTGAATTTGGTATATACAGTGACCCTTCAAGCTCAGACTGGCTCATCCAGCTTGGAAGGGGATATTTCAAACATAAAAACAAAATGGAATTTCAGAGCTCTGCAATTGTC
TGTGCAGGTAAGGCCAGAATATAATCTGCCTTTGCTTTCTGGATAAATCCAAACAGCACATATGAAACAAACAACACAAACACCAAGCATTGCTTTTTTTATTTTGCTTT
TTTTTCTCATTATAATCCTCCTTTTGTCTGTTGTAAGCTTGGATTAGATTCCTTTCCATTTGTATTTTTTTTTGAAAGAGCAATACTTTTGATACTTAGCGGTTACGGTT
GAGATATGTCTTGAACATACCAATGCCTTGTGATTAGT
Protein sequenceShow/hide protein sequence
MPTAAESSASSSSSSLECATPTSQSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSLPVDDCSGYEALSKLENVAKAWRKFVICFRGFWCSWNP