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Sed0025651 (gene) of Chayote v1 genome

Gene IDSed0025651
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:42563684..42566506
RNA-Seq ExpressionSed0025651
SyntenySed0025651
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034486.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa]2.9e-2959.42Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLG-
        MGLIVMA+LCCV + IL IPSASSHALDQSSPL+ TE V     V  RK ++++E AR++ +V  QGF   KQN+ HKENVS         EE GM L  
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLG-

Query:  RKGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        RKGR   + ADMSS++FTMDYA +KRRRPVHNMSL  P
Subjt:  RKGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

KAE8648772.1 hypothetical protein Csa_008620 [Cucumis sativus]1.0e-2657.89Show/hide
Query:  MALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGR-KGRN
        MA+LCCV + +L IPSASSHALDQSSPL+ TE V  +  V  RK +++EE ARV+ KV  QGF   KQ + HKENVS        +EE G  L + KGR 
Subjt:  MALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGR-KGRN

Query:  WGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        W   ADMSS++FTMDYA +KRRRPVHNMSL+ P
Subjt:  WGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

XP_022956442.1 uncharacterized protein LOC111458171 [Cucurbita moschata]5.0e-2959.56Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK
        MGLI+MA+LCCV L IL +P ASSHALDQSSPL+ TE V     V +RK +++EEA+V   V   GF   KQ +E KE VS   GQ Y+REE+      K
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK

Query:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        GR WG+ ADMSSR FTMDYA +KRRRPVHNMS Q P
Subjt:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

XP_022977309.1 uncharacterized protein LOC111477668 [Cucurbita maxima]2.5e-2859.56Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK
        MGLI MA+LCCV L IL +P ASSHALDQSSPL+ TE V     V +RK +++EEA+V   V   GF   KQ +E KENVS   GQ Y+REE+      K
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK

Query:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        GR WG+ ADMSSR  TMDYA +KRRRPVHNMS Q P
Subjt:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

XP_023525366.1 uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]9.5e-2859.85Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTE-TVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGR
        MGLI+MA+LCCV L IL +P ASSHALDQSSPL+VTE  V     V +RK +++EEA+V   V   GF   KQ +E KENVS   GQ Y+REE+      
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTE-TVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGR

Query:  KGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        KGR WG+  DMSSR FTMDYA +KRRRPVHNMS Q P
Subjt:  KGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

TrEMBL top hitse value%identityAlignment
A0A0A0KWA1 Uncharacterized protein3.2e-2959.42Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGR
        MGLIVMA+LCCV + +L IPSASSHALDQSSPL+ TE V  +  V  RK +++EE ARV+ KV  QGF   KQ + HKENVS        +EE G  L +
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGR

Query:  -KGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
         KGR W   ADMSS++FTMDYA +KRRRPVHNMSL+ P
Subjt:  -KGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

A0A5D3CCI7 Putative root meristem growth factor 81.4e-2959.42Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLG-
        MGLIVMA+LCCV + IL IPSASSHALDQSSPL+ TE V     V  RK ++++E AR++ +V  QGF   KQN+ HKENVS         EE GM L  
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEE-ARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLG-

Query:  RKGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        RKGR   + ADMSS++FTMDYA +KRRRPVHNMSL  P
Subjt:  RKGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

A0A6J1D6T9 uncharacterized protein LOC1110175712.8e-2558.39Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLG-R
        MGLIVMA LCCV L IL IP ASSHAL+QS  L+ TE VRF      RK  LMEEA     V   G   P QN+ H++NVS   GQ Y+RE+ GM+L  R
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLG-R

Query:  KGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        KGR W    DMSSR FTMDY   +RRRPVHNMS Q P
Subjt:  KGRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

A0A6J1GWC1 uncharacterized protein LOC1114581712.4e-2959.56Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK
        MGLI+MA+LCCV L IL +P ASSHALDQSSPL+ TE V     V +RK +++EEA+V   V   GF   KQ +E KE VS   GQ Y+REE+      K
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK

Query:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        GR WG+ ADMSSR FTMDYA +KRRRPVHNMS Q P
Subjt:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

A0A6J1IR14 uncharacterized protein LOC1114776681.2e-2859.56Show/hide
Query:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK
        MGLI MA+LCCV L IL +P ASSHALDQSSPL+ TE V     V +RK +++EEA+V   V   GF   KQ +E KENVS   GQ Y+REE+      K
Subjt:  MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRK

Query:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP
        GR WG+ ADMSSR  TMDYA +KRRRPVHNMS Q P
Subjt:  GRNWGSSADMSSRVFTMDYARVKRRRPVHNMSLQHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGATAGTCATGGCCTTACTGTGTTGTGTTTTTCTCTCTATTCTTTGGATACCATCTGCTTCCTCTCATGCTCTGGATCAGTCTTCTCCCTTGAAAGTGACAGA
AACAGTGCGTTTTACTAGTTTTGTTCGAGCGAGGAAGCTCGAACTAATGGAAGAAGCAAGAGTGAATGACAAGGTTGGACTTCAAGGGTTCTATGATCCCAAGCAGAACA
ATGAACACAAGGAAAATGTTTCAGCCTTTACAGGGCAGCTTTATGAAAGGGAGGAAAGTGGAATGGACTTGGGAAGGAAAGGAAGAAACTGGGGGAGCTCGGCCGACATG
TCGTCACGGGTTTTCACGATGGACTATGCTCGCGTAAAACGACGTCGTCCTGTGCACAACATGTCGCTCCAGCATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGATAGTCATGGCCTTACTGTGTTGTGTTTTTCTCTCTATTCTTTGGATACCATCTGCTTCCTCTCATGCTCTGGATCAGTCTTCTCCCTTGAAAGTGACAGA
AACAGTGCGTTTTACTAGTTTTGTTCGAGCGAGGAAGCTCGAACTAATGGAAGAAGCAAGAGTGAATGACAAGGTTGGACTTCAAGGGTTCTATGATCCCAAGCAGAACA
ATGAACACAAGGAAAATGTTTCAGCCTTTACAGGGCAGCTTTATGAAAGGGAGGAAAGTGGAATGGACTTGGGAAGGAAAGGAAGAAACTGGGGGAGCTCGGCCGACATG
TCGTCACGGGTTTTCACGATGGACTATGCTCGCGTAAAACGACGTCGTCCTGTGCACAACATGTCGCTCCAGCATCCTTGAAATTGACTCGCTTTTTCTAATCTGACCCC
CTCATTTGTTTGTTATTGCAAATTTAACCCAATAAAATGAGGGATTTTCAATTTTAACCAGCTTTTGTGGCCGACAAGTAGGCGGACTAATTTTGGGATTTTACATAATT
AAAAATAATCAAATTAGAGGGTCCGTTTGGATTTGATATTAGC
Protein sequenceShow/hide protein sequence
MGLIVMALLCCVFLSILWIPSASSHALDQSSPLKVTETVRFTSFVRARKLELMEEARVNDKVGLQGFYDPKQNNEHKENVSAFTGQLYEREESGMDLGRKGRNWGSSADM
SSRVFTMDYARVKRRRPVHNMSLQHP