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Sed0025686 (gene) of Chayote v1 genome

Gene IDSed0025686
OrganismSechium edule (Chayote v1)
DescriptionBasic helix-loop-helix (bHLH) DNA-binding family protein
Genome locationLG04:35266033..35267201
RNA-Seq ExpressionSed0025686
SyntenySed0025686
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EFJ29290.1 hypothetical protein SELMODRAFT_410122 [Selaginella moellendorffii]4.0e-0961.02Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

EFJ38764.1 hypothetical protein SELMODRAFT_402928 [Selaginella moellendorffii]4.0e-0961.02Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

XP_024377595.1 transcription factor EAT1-like isoform X1 [Physcomitrium patens]5.2e-0945.98Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS
        G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ +  +    S+G K    + + D +  S
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS

XP_024529751.1 transcription factor EAT1 [Selaginella moellendorffii]4.0e-0961.02Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

XP_024530159.1 transcription factor EAT1 [Selaginella moellendorffii]4.0e-0961.02Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

TrEMBL top hitse value%identityAlignment
A0A2K1KEW0 BHLH domain-containing protein2.5e-0945.98Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS
        G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ +  +    S+G K    + + D +  S
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS

A0A7I4E393 BHLH domain-containing protein2.5e-0945.98Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS
        G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ +  +    S+G K    + + D +  S
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS

A0A7I4E7V0 BHLH domain-containing protein2.5e-0945.98Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS
        G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ +  +    S+G K    + + D +  S
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVD-YKIIESSNGTKFTCQLCNKDGHLAS

D8QNH7 BHLH domain-containing protein1.9e-0961.02Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

D8RDP9 BHLH domain-containing protein1.9e-0961.02Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

SwissProt top hitse value%identityAlignment
Q7X8R0 Transcription factor EAT14.1e-0954.24Show/hide
Query:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        G  NFA ER+RR +LN ++ TLR L PNP++ +R SI+ DAIEYI  L  +V ELK+L+
Subjt:  GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

Q84TK1 Transcription factor bHLH109.6e-0640.38Show/hide
Query:  ERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        ER+RR+  N+ +  L++L+PNP++ +R SI+ +AI+YI+ L  ++ E K+L+
Subjt:  ERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

Q8GX46 Transcription factor bHLH912.3e-0749.09Show/hide
Query:  FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        F  ER+RR  LN  Y  L+ L+P+PS+ +R SIL+D I+YI  L   V+ELK L+
Subjt:  FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL

Q9CAD0 Transcription factor EGL19.6e-0647.27Show/hide
Query:  GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK
        GN A  E++RR +LN  ++TLRS++P+ S+ ++VSIL D IEY++ L+  V EL+
Subjt:  GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK

Q9LND0 Transcription factor bHLH897.3e-0635.9Show/hide
Query:  MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSN
        +N  G G+     F  ER+RR+   + +  L++L+PNP++ +R SI+ +AI+YI+ L  +++E K LLV+ K ++  N
Subjt:  MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSN

Arabidopsis top hitse value%identityAlignment
AT1G06170.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.2e-0735.9Show/hide
Query:  MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSN
        +N  G G+     F  ER+RR+   + +  L++L+PNP++ +R SI+ +AI+YI+ L  +++E K LLV+ K ++  N
Subjt:  MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSN

AT1G06170.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.2e-0735.9Show/hide
Query:  MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSN
        +N  G G+     F  ER+RR+   + +  L++L+PNP++ +R SI+ +AI+YI+ L  +++E K LLV+ K ++  N
Subjt:  MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSN

AT1G63650.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.8e-0747.27Show/hide
Query:  GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK
        GN A  E++RR +LN  ++TLRS++P+ S+ ++VSIL D IEY++ L+  V EL+
Subjt:  GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK

AT1G63650.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.8e-0747.27Show/hide
Query:  GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK
        GN A  E++RR +LN  ++TLRS++P+ S+ ++VSIL D IEY++ L+  V EL+
Subjt:  GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK

AT2G31210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.6e-0849.09Show/hide
Query:  FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL
        F  ER+RR  LN  Y  L+ L+P+PS+ +R SIL+D I+YI  L   V+ELK L+
Subjt:  FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAGATGGCTATGGAAATTTTGCTCGAGAACGACAGAGAAGATTGGAATTGAACAACGAATATGTAACTCTTAGGAGTTTGGTTCCTAATCCTAGCCAGGCGAA
TAGAGTATCGATTCTTCGAGACGCCATAGAATACATCCGCACGCTTGAAGGATCAGTGAATGAACTGAAACTGCTGCTGGTGGATTACAAGATCATAGAGAGCTCAAATG
GAACCAAGTTCACATGTCAGCTGTGTAACAAAGATGGTCACCTTGCATCACACTGCGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAGATGGCTATGGAAATTTTGCTCGAGAACGACAGAGAAGATTGGAATTGAACAACGAATATGTAACTCTTAGGAGTTTGGTTCCTAATCCTAGCCAGGCGAA
TAGAGTATCGATTCTTCGAGACGCCATAGAATACATCCGCACGCTTGAAGGATCAGTGAATGAACTGAAACTGCTGCTGGTGGATTACAAGATCATAGAGAGCTCAAATG
GAACCAAGTTCACATGTCAGCTGTGTAACAAAGATGGTCACCTTGCATCACACTGCGATCTTTGA
Protein sequenceShow/hide protein sequence
MNEDGYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSNGTKFTCQLCNKDGHLASHCDL