; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025692 (gene) of Chayote v1 genome

Gene IDSed0025692
OrganismSechium edule (Chayote v1)
DescriptionRNase H domain-containing protein
Genome locationLG08:28338666..28347777
RNA-Seq ExpressionSed0025692
SyntenySed0025692
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588976.1 hypothetical protein SDJN03_17541, partial [Cucurbita argyrosperma subsp. sororia]3.1e-12077.47Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYR+ KELE QAG   FDPNATIYKGYHLSKE+EQYLASHGL+SATYSISAANVTNDLFGKLLACPYE+PS+  GKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY
        KAKRQ  +ENTES                                 YFLEFDGASKGNPGLAGAGAVLRAN+GTT       +CRLQEGVGIATNNVAEY
Subjt:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY

Query:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        RAVILGLKHALKSGFKHI VRGDSKLVCMQVQGLWKLKNQNMA+LCKVA +LKDKFVSFEINHIPREQNSDADA ANRAIYL+DG+VVE+CKH
Subjt:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

XP_008443477.1 PREDICTED: uncharacterized protein LOC103487060 isoform X1 [Cucumis melo]1.2e-11482.13Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLAC-PYEQPSANIGKMAEEY
        MEGDKDAYYVVQKGDVFGFYR+ KEL TQ G  RFDPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT DLFGK+L C PYEQPS   GKMAEEY
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLAC-PYEQPSANIGKMAEEY

Query:  PKAKRQ-HILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQ
        PKA+RQ  +L+NTE TYFLEFDGASKGNPGLAGAGA+LRAN+G+T       VCRLQEGVGIAT NVAEYRA+ILGLKHALK+G KHI V+GDSKLVCMQ
Subjt:  PKAKRQ-HILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQ

Query:  VQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        VQGLWKLKNQNMA LCKVA ELKDKFVSFEI+H+PR +NSDADA ANRAI+LQDGVVVE+C H
Subjt:  VQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

XP_022928161.1 uncharacterized protein LOC111435064 [Cucurbita moschata]1.6e-11977.13Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYR+ KELE QAG   FDPNATIYKGYHLSKE+EQYLASHGL+SATYSISAANVTNDLFGKLLACPYEQPS+  G+MAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY
        KAKRQ  +ENTES                                 YFLEFDGASKGNPGLAGAGAVLRAN+GTT       +CRLQEGVGIATNNVAEY
Subjt:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY

Query:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        RAVILGLKHALKSGFKHI VRGDSKLVCMQVQGLWKLKNQNMA+LCKVA +LKDKFVSFEINHIPREQNSDADA ANRAI+L+DG+VVE+CKH
Subjt:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

XP_022989146.1 uncharacterized protein LOC111486303 [Cucurbita maxima]1.4e-12077.82Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYR+ KELE QAG   FDPNATIYKGYHLSKE+EQYLASHGL+SATYSISAANVTNDLFGKLLACPYEQPS+  GKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY
        KAKRQ  +ENTES                                 YFLEFDGASKGNPGLAGAGAVLRAN+GTT       +CRLQEGVGIATNNVAEY
Subjt:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY

Query:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        RAVILGLKHALKSGFKHI VRGDSKLVCMQVQGLWKLKNQNMA+LCKVA +LKDKFVSFEINHIPREQNSDADA ANRAIYL+DG+VVE+CKH
Subjt:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

XP_023529762.1 uncharacterized protein LOC111792488 [Cucurbita pepo subsp. pepo]6.3e-12178.16Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYR+ KELE QAG   FDPNATIYKGYHLSKE+EQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPS+  GKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY
        KAKRQ  +ENTES                                 YFLEFDGASKGNPGLAGAGAVLRAN+GTT       +CRLQEGVGIATNNVAEY
Subjt:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY

Query:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        RAVILGLKHALKSGFKHI VRGDSKLVCMQVQGLWKLKNQNMA+LCKVA +LKDKFVSFEINHIPREQNSDADA ANRAIYL+DG+VVE+CKH
Subjt:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

TrEMBL top hitse value%identityAlignment
A0A0A0LHV8 RNase H domain-containing protein1.9e-11080.61Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLAC-PYEQPSANIGKMAEEY
        MEGDKDAYYVV KGDVFGFYR  KEL T  G  RFDP+ATIYKGYHLSKEAE+YL +HGLQSATYSISAANVT DLFGK+L C PYEQPSA  GKMAEEY
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLAC-PYEQPSANIGKMAEEY

Query:  PKAKRQ-HILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQ
         KA+RQ  +LENTE TYFLEFDGASKGNPGLAGAGAVLRAN+G+T       VC+LQEGVGIAT NVAEYRAVILGLKHALK+G KHI V+GDSKLVCMQ
Subjt:  PKAKRQ-HILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQ

Query:  VQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        VQGLWKLKN NMA  CKVA ELKDKFVSFEI+H PR+QNSDADA AN AI LQDGVVVE+C H
Subjt:  VQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

A0A1S3B7N6 uncharacterized protein LOC103487060 isoform X15.6e-11582.13Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLAC-PYEQPSANIGKMAEEY
        MEGDKDAYYVVQKGDVFGFYR+ KEL TQ G  RFDPNATIYKGYHLSKEAE+YL SHGLQSATYSISAANVT DLFGK+L C PYEQPS   GKMAEEY
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLAC-PYEQPSANIGKMAEEY

Query:  PKAKRQ-HILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQ
        PKA+RQ  +L+NTE TYFLEFDGASKGNPGLAGAGA+LRAN+G+T       VCRLQEGVGIAT NVAEYRA+ILGLKHALK+G KHI V+GDSKLVCMQ
Subjt:  PKAKRQ-HILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQ

Query:  VQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        VQGLWKLKNQNMA LCKVA ELKDKFVSFEI+H+PR +NSDADA ANRAI+LQDGVVVE+C H
Subjt:  VQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

A0A6J1D7M4 uncharacterized protein LOC1110183842.3e-10057.14Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQP------------
        MEGDKDAYYVVQKG V GFY++LKE E Q GCS FDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVT DLFGKLLAC YEQP            
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQP------------

Query:  --------------------------------------------------------------------------SANIGKMAEEYPKAKRQHILENTE--
                                                                                  SA+ GKMAE Y  AKR H  E  E  
Subjt:  --------------------------------------------------------------------------SANIGKMAEEYPKAKRQHILENTE--

Query:  -----------------------------STYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGF
                                      TYFLEFDGASKGNPGLAGAGAVLRA +G+T       VCRLQEGVGIATNNVAEYRAVILGLKHALK+GF
Subjt:  -----------------------------STYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGF

Query:  KHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        KHI V+GDSKLVCMQVQGLWK+KN NM  LCKVA ELKDKF SFEI+HIPREQNSDADA ANRAI+L+DGVVVE+CKH
Subjt:  KHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

A0A6J1EJI9 uncharacterized protein LOC1114350647.5e-12077.13Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYR+ KELE QAG   FDPNATIYKGYHLSKE+EQYLASHGL+SATYSISAANVTNDLFGKLLACPYEQPS+  G+MAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY
        KAKRQ  +ENTES                                 YFLEFDGASKGNPGLAGAGAVLRAN+GTT       +CRLQEGVGIATNNVAEY
Subjt:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY

Query:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        RAVILGLKHALKSGFKHI VRGDSKLVCMQVQGLWKLKNQNMA+LCKVA +LKDKFVSFEINHIPREQNSDADA ANRAI+L+DG+VVE+CKH
Subjt:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

A0A6J1JJ82 uncharacterized protein LOC1114863036.8e-12177.82Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYR+ KELE QAG   FDPNATIYKGYHLSKE+EQYLASHGL+SATYSISAANVTNDLFGKLLACPYEQPS+  GKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY
        KAKRQ  +ENTES                                 YFLEFDGASKGNPGLAGAGAVLRAN+GTT       +CRLQEGVGIATNNVAEY
Subjt:  KAKRQHILENTES--------------------------------TYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEY

Query:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH
        RAVILGLKHALKSGFKHI VRGDSKLVCMQVQGLWKLKNQNMA+LCKVA +LKDKFVSFEINHIPREQNSDADA ANRAIYL+DG+VVE+CKH
Subjt:  RAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKH

SwissProt top hitse value%identityAlignment
P54162 14.7 kDa ribonuclease H-like protein3.4e-0833.08Show/hide
Query:  DGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAME
        DGAS GNPG +G G  ++       + FS         +G+ TN  AE+ A+I G+K     G++ +  R DS +V  +   L  +KN       +  + 
Subjt:  DGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAME

Query:  LKDKFVSFEINHIPREQNSDADAEANRAIYLQD
        LK  F  F I  IP +QN  AD  A  AI L +
Subjt:  LKDKFVSFEINHIPREQNSDADAEANRAIYLQD

P64956 Uncharacterized protein Mb2253c1.4e-1740.91Show/hide
Query:  LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKV
        +E DG S+GNPG AG GAV+   + +TV      +   ++ +G ATNNVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+ ++  L   
Subjt:  LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKV

Query:  AMELKDKFVSFEINHIPREQNSDADAEANRAI
        A  L  +F       +PR +N+ AD  AN A+
Subjt:  AMELKDKFVSFEINHIPREQNSDADAEANRAI

P9WLH4 Uncharacterized protein MT22871.4e-1740.91Show/hide
Query:  LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKV
        +E DG S+GNPG AG GAV+   + +TV      +   ++ +G ATNNVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+ ++  L   
Subjt:  LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKV

Query:  AMELKDKFVSFEINHIPREQNSDADAEANRAI
        A  L  +F       +PR +N+ AD  AN A+
Subjt:  AMELKDKFVSFEINHIPREQNSDADAEANRAI

P9WLH5 Bifunctional protein Rv2228c1.4e-1740.91Show/hide
Query:  LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKV
        +E DG S+GNPG AG GAV+   + +TV      +   ++ +G ATNNVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+ ++  L   
Subjt:  LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKV

Query:  AMELKDKFVSFEINHIPREQNSDADAEANRAI
        A  L  +F       +PR +N+ AD  AN A+
Subjt:  AMELKDKFVSFEINHIPREQNSDADAEANRAI

Q9HSF6 Ribonuclease HI5.7e-1641.54Show/hide
Query:  FDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAM
        FDGAS+GNPG A  G VL + +G  V +         + +G ATNN AEY A+I  L+ A   GF  I +RGDS+LV  Q+ G W   + ++      A 
Subjt:  FDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAM

Query:  ELKDKFVSFEINHIPREQNSDADAEANRAI
        EL   F  + I H+PR  N  ADA AN A+
Subjt:  ELKDKFVSFEINHIPREQNSDADAEANRAI

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein4.6e-6142.7Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEE--
        ++ +KDA++VV+KGDV G Y++L + + Q G S FD   ++YKGY L K+ E+YL+S GL+   YS+ A+++ +D+FG L  C +++P+    K++E+  
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEE--

Query:  --------------------YPKAKRQHILEN----TESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILG
                            Y   ++   +E     ++ T F+EFDGASKGNPGL+GA AVL+  +G+        +CR+++G+GIATNN AEY A+ILG
Subjt:  --------------------YPKAKRQHILEN----TESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILG

Query:  LKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVV
        LK+A++ G+K+I V+GDSKLVCMQ++G WK+ ++ +A L K A  L +K VSFEI+H+ R  N+DAD +AN A+ L +G V
Subjt:  LKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.1e-6546.37Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        ME +KDA+Y+V+KGD+ G YR+L E + QAG S   P  ++YKGY   K AE  L+S G+++A +S++A++V +D FGKL+ CP +QPS++ G+   +  
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTESTYF------------------------------------LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNN
         +KR   + + ES  F                                    +EFDGASKGNPG AGAGAVLRA++ + +    +Y   L+EGVG ATNN
Subjt:  KAKRQHILENTESTYF------------------------------------LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNN

Query:  VAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDG
        VAEYRA++LGL+ AL  GFK++ V GDS LVCMQVQG WK  +  MA LCK A EL + F +F+I HI RE+NS+AD +AN AI+L DG
Subjt:  VAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDG

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.1e-6546.37Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP
        ME +KDA+Y+V+KGD+ G YR+L E + QAG S   P  ++YKGY   K AE  L+S G+++A +S++A++V +D FGKL+ CP +QPS++ G+   +  
Subjt:  MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYP

Query:  KAKRQHILENTESTYF------------------------------------LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNN
         +KR   + + ES  F                                    +EFDGASKGNPG AGAGAVLRA++ + +    +Y   L+EGVG ATNN
Subjt:  KAKRQHILENTESTYF------------------------------------LEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNN

Query:  VAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDG
        VAEYRA++LGL+ AL  GFK++ V GDS LVCMQVQG WK  +  MA LCK A EL + F +F+I HI RE+NS+AD +AN AI+L DG
Subjt:  VAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDG

AT5G51080.1 RNase H family protein6.2e-5844.92Show/hide
Query:  DKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQ--PSA--NIGKMAEEY
        +KDA++VV+KGD+ G Y++L + + Q G S +DP  ++YKGY L K+ E+ L++ GL+   Y   A ++  D+FG L  C ++   PSA  ++ K+AE  
Subjt:  DKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQ--PSA--NIGKMAEEY

Query:  PKAKRQHILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQV
        P A      + +  T  +EFDGASKGNPGL+GA AVL+  +G+ + K       +++G+GIATNN AEY  +ILGLKHA++ G+  I V+ DSKLVCMQ+
Subjt:  PKAKRQHILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQV

Query:  QGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVV
        +G WK+ ++ ++ L K A +L DK +SFEI+H+ R  NSDAD +AN A  L +G V
Subjt:  QGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVV

AT5G51080.2 RNase H family protein6.2e-5844.92Show/hide
Query:  DKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQ--PSA--NIGKMAEEY
        +KDA++VV+KGD+ G Y++L + + Q G S +DP  ++YKGY L K+ E+ L++ GL+   Y   A ++  D+FG L  C ++   PSA  ++ K+AE  
Subjt:  DKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQ--PSA--NIGKMAEEY

Query:  PKAKRQHILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQV
        P A      + +  T  +EFDGASKGNPGL+GA AVL+  +G+ + K       +++G+GIATNN AEY  +ILGLKHA++ G+  I V+ DSKLVCMQ+
Subjt:  PKAKRQHILENTESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQV

Query:  QGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVV
        +G WK+ ++ ++ L K A +L DK +SFEI+H+ R  NSDAD +AN A  L +G V
Subjt:  QGLWKLKNQNMASLCKVAMELKDKFVSFEINHIPREQNSDADAEANRAIYLQDGVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGATAAAGATGCCTATTACGTTGTACAGAAAGGGGACGTTTTTGGATTTTACAGGAATTTGAAGGAGCTCGAGACGCAAGCTGGATGTTCGAGATTTGATCC
TAATGCAACGATCTACAAAGGGTATCACTTATCTAAAGAAGCAGAGCAGTACCTTGCATCACATGGACTTCAAAGTGCAACTTATTCTATAAGTGCTGCCAATGTGACAA
ATGATCTATTTGGAAAACTACTTGCTTGTCCCTATGAGCAACCATCTGCTAATATAGGAAAAATGGCTGAAGAATACCCCAAAGCTAAGAGACAACACATCCTTGAGAAT
ACTGAATCTACCTATTTTCTTGAGTTTGATGGAGCATCAAAAGGAAATCCTGGGTTAGCAGGAGCTGGAGCAGTTCTACGTGCTAACAACGGAACCACGGTAGATAAATT
CAGCTATTATGTCTGCAGGTTGCAAGAAGGAGTTGGGATTGCTACAAATAATGTTGCTGAATATCGTGCTGTAATTTTAGGACTGAAACATGCTCTAAAGAGTGGCTTTA
AACACATTTGTGTGCGAGGAGACTCCAAGCTTGTTTGTATGCAGGTTCAGGGTCTATGGAAGCTCAAAAACCAAAATATGGCTAGTTTGTGTAAAGTGGCCATGGAGCTC
AAGGATAAGTTTGTGTCATTTGAAATCAACCATATCCCTAGGGAACAAAATTCCGATGCGGATGCCGAAGCAAACCGTGCTATATATCTCCAAGATGGAGTTGTAGTAGA
AAACTGTAAGCATACATGA
mRNA sequenceShow/hide mRNA sequence
GACTGGTCTGTCACTACGCTGCAACAATTTTACTGATCGCTCGTGACAGCATCACTCCTTCGCCAATCCTTTGCAAAATTTCTTCGCCATTGCAGCACCTTCCATTTCTT
CAGAATGGAGGGAGATAAAGATGCCTATTACGTTGTACAGAAAGGGGACGTTTTTGGATTTTACAGGAATTTGAAGGAGCTCGAGACGCAAGCTGGATGTTCGAGATTTG
ATCCTAATGCAACGATCTACAAAGGGTATCACTTATCTAAAGAAGCAGAGCAGTACCTTGCATCACATGGACTTCAAAGTGCAACTTATTCTATAAGTGCTGCCAATGTG
ACAAATGATCTATTTGGAAAACTACTTGCTTGTCCCTATGAGCAACCATCTGCTAATATAGGAAAAATGGCTGAAGAATACCCCAAAGCTAAGAGACAACACATCCTTGA
GAATACTGAATCTACCTATTTTCTTGAGTTTGATGGAGCATCAAAAGGAAATCCTGGGTTAGCAGGAGCTGGAGCAGTTCTACGTGCTAACAACGGAACCACGGTAGATA
AATTCAGCTATTATGTCTGCAGGTTGCAAGAAGGAGTTGGGATTGCTACAAATAATGTTGCTGAATATCGTGCTGTAATTTTAGGACTGAAACATGCTCTAAAGAGTGGC
TTTAAACACATTTGTGTGCGAGGAGACTCCAAGCTTGTTTGTATGCAGGTTCAGGGTCTATGGAAGCTCAAAAACCAAAATATGGCTAGTTTGTGTAAAGTGGCCATGGA
GCTCAAGGATAAGTTTGTGTCATTTGAAATCAACCATATCCCTAGGGAACAAAATTCCGATGCGGATGCCGAAGCAAACCGTGCTATATATCTCCAAGATGGAGTTGTAG
TAGAAAACTGTAAGCATACATGAACTCAAAACACACTCTCAGTTCCAGATGGTAGATAAGGATATTCTCTGCATTATGTTATAAGCTGCAATGAGCTTCCCAGATTAAGG
GGATATTTAAGTACCATTTGAATGCTTAAAATGCTGGATTAATATCCCAATTTTTTGTTTTACTTTGTTAACTGGGAGGCAACTTCAGGACTGTAAATATCAAAACTTGG
AATATTAATATTTTGAGAGTAATGCAGAGATGGTTAGTATC
Protein sequenceShow/hide protein sequence
MEGDKDAYYVVQKGDVFGFYRNLKELETQAGCSRFDPNATIYKGYHLSKEAEQYLASHGLQSATYSISAANVTNDLFGKLLACPYEQPSANIGKMAEEYPKAKRQHILEN
TESTYFLEFDGASKGNPGLAGAGAVLRANNGTTVDKFSYYVCRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHICVRGDSKLVCMQVQGLWKLKNQNMASLCKVAMEL
KDKFVSFEINHIPREQNSDADAEANRAIYLQDGVVVENCKHT