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Sed0025721 (gene) of Chayote v1 genome

Gene IDSed0025721
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:5189046..5189417
RNA-Seq ExpressionSed0025721
SyntenySed0025721
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC12618.1 hypothetical protein L484_012996 [Morus notabilis]4.7e-1038.22Show/hide
Query:  MSHRKVLSHGN----------------NNAPKFYFRDFQALALRSSPAPPPFYGGD-----------SEFDAVCKIPPPPC-------RVPATGSRWEDE
        M+HRKV S G+                 +  K Y    QAL L SS + PP                S  + + KIPPPPC          A G RW+ E
Subjt:  MSHRKVLSHGN----------------NNAPKFYFRDFQALALRSSPAPPPFYGGD-----------SEFDAVCKIPPPPC-------RVPATGSRWEDE

Query:  DPFLAAYKECTKSVKNGKFVERGSKRG--VKKSKWLVFSCKSSGCCQVRDDRIFSYT
        DPFL AYKECTK VK GK  E   KR   + KS ++ FSCK+S  C+VR+D     T
Subjt:  DPFLAAYKECTKSVKNGKFVERGSKRG--VKKSKWLVFSCKSSGCCQVRDDRIFSYT

KAA0036397.1 hypothetical protein E6C27_scaffold18G001980 [Cucumis melo var. makuwa]2.0e-1348.09Show/hide
Query:  HRKVLSHGN-----NNAPKF-YFRDFQALALR-SSPAPPPFYGGD-SEFDAV--CKIPPPPCRVP---ATGSRWEDEDPFLAAYKECTKSVKNGKFVERG
        HRKVLS GN      N P    FRDFQALAL   S +   +   D S+FD +   KIPPPPCR P   A  ++ E +DPFL AYKECTKSVKN      G
Subjt:  HRKVLSHGN-----NNAPKF-YFRDFQALALR-SSPAPPPFYGGD-SEFDAV--CKIPPPPCRVP---ATGSRWEDEDPFLAAYKECTKSVKNGKFVERG

Query:  SKRGVKKSKWLV--FSCKSSGCCQVRDDRIF
            VKKSK+    FSCK+   C + D   F
Subjt:  SKRGVKKSKWLV--FSCKSSGCCQVRDDRIF

KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]9.8e-1647.06Show/hide
Query:  MSHRKVLSHGN---------NNAPKFYFRDFQALALRSSPAPPPFYGGDSEFDAVCKI-PPPPCRV--------PATGSRWEDEDPFLAAYKECTKSVKN
        MSH+K+ S GN           + K  F+D Q L L S          DSEFD V KI PPPPCRV           GSRWE EDPFL AYKECTKSVK 
Subjt:  MSHRKVLSHGN---------NNAPKFYFRDFQALALRSSPAPPPFYGGDSEFDAVCKI-PPPPCRV--------PATGSRWEDEDPFLAAYKECTKSVKN

Query:  GKFVERGSKRGVKKSKWLVFSCKSSGCCQVRDDRIF
        GK V        KKSK   F CKS   C++RD  +F
Subjt:  GKFVERGSKRGVKKSKWLVFSCKSSGCCQVRDDRIF

KAG6604109.1 hypothetical protein SDJN03_04718, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1957.8Show/hide
Query:  MSHRKVLSHGN-------NNA-PKFYFRDFQALALRSSPAPPPFYGGDSEFDAVCKIPPPPCRVPATGSR---WEDEDPFLAAYKECTKSVKNGKFVERG
        M+HRKVLS  N       N A  KFYFRDFQALAL+ SP+   ++ GDSEFD V KIPPPP R      R    +++DPFL AYKECTKSVKNG FVERG
Subjt:  MSHRKVLSHGN-------NNA-PKFYFRDFQALALRSSPAPPPFYGGDSEFDAVCKIPPPPCRVPATGSR---WEDEDPFLAAYKECTKSVKNGKFVERG

Query:  SKRGVKKSK
        +K     SK
Subjt:  SKRGVKKSK

KGN48633.1 hypothetical protein Csa_003745 [Cucumis sativus]7.8e-1347.41Show/hide
Query:  HRKVLS------HGNNNAPKF-YFRDFQALALR---SSPAPPPFYGGDSEFDAV--CKIPPPPCRVP-----ATGSRWEDEDPFLAAYKECTKSVKNGKF
        HRK+LS      H N N P    FRDFQALAL    SS    P   G S+FD +   KIPPPPCR+P     A  ++ E +DPFL AYKECTKSVKN   
Subjt:  HRKVLS------HGNNNAPKF-YFRDFQALALR---SSPAPPPFYGGDSEFDAV--CKIPPPPCRVP-----ATGSRWEDEDPFLAAYKECTKSVKNGKF

Query:  VERGSKRGVKKSKWLV--FSCKSSGCCQVRDDRIF
                VKKSK+L   FSCK+   C + D+  F
Subjt:  VERGSKRGVKKSKWLV--FSCKSSGCCQVRDDRIF

TrEMBL top hitse value%identityAlignment
A0A061DHT6 Uncharacterized protein5.1e-1043.69Show/hide
Query:  ALRSSPAPPPFYGGDSEFDAVCKIPPPPCRV--------PATGSRWEDEDPFLAAYKECTKSVKNGKFVERGSK---RGVKKSKWLVFSCKSSGCCQVRD
        AL  +P+P    GG        K+PPPPC +           G RW  EDPFLAAYKECTK   NGK+   G K     V+K K + FSCK+S  C VR 
Subjt:  ALRSSPAPPPFYGGDSEFDAVCKIPPPPCRV--------PATGSRWEDEDPFLAAYKECTKSVKNGKFVERGSK---RGVKKSKWLVFSCKSSGCCQVRD

Query:  DRI
        D +
Subjt:  DRI

A0A0A0KGJ1 Uncharacterized protein3.8e-1347.41Show/hide
Query:  HRKVLS------HGNNNAPKF-YFRDFQALALR---SSPAPPPFYGGDSEFDAV--CKIPPPPCRVP-----ATGSRWEDEDPFLAAYKECTKSVKNGKF
        HRK+LS      H N N P    FRDFQALAL    SS    P   G S+FD +   KIPPPPCR+P     A  ++ E +DPFL AYKECTKSVKN   
Subjt:  HRKVLS------HGNNNAPKF-YFRDFQALALR---SSPAPPPFYGGDSEFDAV--CKIPPPPCRVP-----ATGSRWEDEDPFLAAYKECTKSVKNGKF

Query:  VERGSKRGVKKSKWLV--FSCKSSGCCQVRDDRIF
                VKKSK+L   FSCK+   C + D+  F
Subjt:  VERGSKRGVKKSKWLV--FSCKSSGCCQVRDDRIF

A0A5D3CLL9 Uncharacterized protein9.9e-1448.09Show/hide
Query:  HRKVLSHGN-----NNAPKF-YFRDFQALALR-SSPAPPPFYGGD-SEFDAV--CKIPPPPCRVP---ATGSRWEDEDPFLAAYKECTKSVKNGKFVERG
        HRKVLS GN      N P    FRDFQALAL   S +   +   D S+FD +   KIPPPPCR P   A  ++ E +DPFL AYKECTKSVKN      G
Subjt:  HRKVLSHGN-----NNAPKF-YFRDFQALALR-SSPAPPPFYGGD-SEFDAV--CKIPPPPCRVP---ATGSRWEDEDPFLAAYKECTKSVKNGKFVERG

Query:  SKRGVKKSKWLV--FSCKSSGCCQVRDDRIF
            VKKSK+    FSCK+   C + D   F
Subjt:  SKRGVKKSKWLV--FSCKSSGCCQVRDDRIF

A0A7J6I4Y5 Uncharacterized protein5.1e-1040.88Show/hide
Query:  MSHRKVLSHGNNNAPKFYFRD-------------FQALALRSSPAPPPFYGGDSEFDAVCKIPPPPCRVP---------ATGSRWEDEDPFLAAYKECTK
        MSHRKV S G   +  F + D              QAL L SSP+P P     +      KIP PPC  P         A G +W+ EDPFL AYKECTK
Subjt:  MSHRKVLSHGNNNAPKFYFRD-------------FQALALRSSPAPPPFYGGDSEFDAVCKIPPPPCRVP---------ATGSRWEDEDPFLAAYKECTK

Query:  SVKNGKFVERGSKRGVKKSKWLVFSCKSSGCCQVRDD
          K G   ++ SK  V+K+ ++ FSCKSS  C VR++
Subjt:  SVKNGKFVERGSKRGVKKSKWLVFSCKSSGCCQVRDD

W9RVC8 Uncharacterized protein2.3e-1038.22Show/hide
Query:  MSHRKVLSHGN----------------NNAPKFYFRDFQALALRSSPAPPPFYGGD-----------SEFDAVCKIPPPPC-------RVPATGSRWEDE
        M+HRKV S G+                 +  K Y    QAL L SS + PP                S  + + KIPPPPC          A G RW+ E
Subjt:  MSHRKVLSHGN----------------NNAPKFYFRDFQALALRSSPAPPPFYGGD-----------SEFDAVCKIPPPPC-------RVPATGSRWEDE

Query:  DPFLAAYKECTKSVKNGKFVERGSKRG--VKKSKWLVFSCKSSGCCQVRDDRIFSYT
        DPFL AYKECTK VK GK  E   KR   + KS ++ FSCK+S  C+VR+D     T
Subjt:  DPFLAAYKECTKSVKNGKFVERGSKRG--VKKSKWLVFSCKSSGCCQVRDDRIFSYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCACAGAAAAGTCCTATCCCATGGAAATAATAATGCTCCAAAATTCTACTTCCGAGATTTCCAAGCTCTTGCCTTACGGTCGTCGCCGGCACCGCCGCCTTTTTA
CGGCGGAGATTCTGAATTTGATGCCGTTTGCAAGATTCCTCCGCCGCCGTGCCGGGTTCCCGCCACGGGAAGCCGGTGGGAGGATGAGGACCCTTTCCTGGCGGCGTATA
AGGAGTGCACAAAGAGTGTGAAAAATGGGAAGTTTGTGGAGAGGGGAAGTAAAAGAGGTGTGAAGAAGAGTAAGTGGTTGGTGTTTTCTTGTAAGAGCTCTGGTTGTTGT
CAAGTTAGAGATGATAGAATTTTTTCCTACACTAGTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCACAGAAAAGTCCTATCCCATGGAAATAATAATGCTCCAAAATTCTACTTCCGAGATTTCCAAGCTCTTGCCTTACGGTCGTCGCCGGCACCGCCGCCTTTTTA
CGGCGGAGATTCTGAATTTGATGCCGTTTGCAAGATTCCTCCGCCGCCGTGCCGGGTTCCCGCCACGGGAAGCCGGTGGGAGGATGAGGACCCTTTCCTGGCGGCGTATA
AGGAGTGCACAAAGAGTGTGAAAAATGGGAAGTTTGTGGAGAGGGGAAGTAAAAGAGGTGTGAAGAAGAGTAAGTGGTTGGTGTTTTCTTGTAAGAGCTCTGGTTGTTGT
CAAGTTAGAGATGATAGAATTTTTTCCTACACTAGTAAATAG
Protein sequenceShow/hide protein sequence
MSHRKVLSHGNNNAPKFYFRDFQALALRSSPAPPPFYGGDSEFDAVCKIPPPPCRVPATGSRWEDEDPFLAAYKECTKSVKNGKFVERGSKRGVKKSKWLVFSCKSSGCC
QVRDDRIFSYTSK