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Sed0025723 (gene) of Chayote v1 genome

Gene IDSed0025723
OrganismSechium edule (Chayote v1)
Descriptionserine-rich protein-related
Genome locationLG07:5655499..5656187
RNA-Seq ExpressionSed0025723
SyntenySed0025723
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]2.8e-2667.92Show/hide
Query:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLP------KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS--D
        MANKTA SSRLCLCAPTTHPGSFRCSLHR P   +++HK P P  P      KAA T TD   +KAFLMQ++KPSSH LQRR NFQPKPSRFC   S  D
Subjt:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLP------KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS--D

Query:  HRLAVS
         RLAVS
Subjt:  HRLAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2875.51Show/hide
Query:  MANKTAPSS-RLCLCAPTTHPGSFRCSLHRHPRRLSANHKN-PPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDSDHRLAVS
        MANKTAPSS RLCLCAPTTHPGSFRCSLHR  R+ S      PPP     A +ATDLVKAFLMQVIKPSS DLQRRRNFQPKPSRFC   SD+ LAVS
Subjt:  MANKTAPSS-RLCLCAPTTHPGSFRCSLHRHPRRLSANHKN-PPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDSDHRLAVS

KAG7014157.1 hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2668.69Show/hide
Query:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSAN---HKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDSDHRLAVS
        MANKTA SSRLCLCAPT+HPGSFRCSLHR PR+ S      +    +   A +TAT L K FLMQ IKPSSHDL RRRNFQPKPSRFC   SDHRL VS
Subjt:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSAN---HKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDSDHRLAVS

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2775Show/hide
Query:  MANKTAPSS-RLCLCAPTTHPGSFRCSLHRHPRRLSANHKN-PPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDSDHRLA
        MANKTAPSS RLCLCAPTTHPGSFRCSLHR  R+ S      PPP     A +ATDLVKAFLMQVIKPSS DLQRRRNFQPKPSRFC   SD+ LA
Subjt:  MANKTAPSS-RLCLCAPTTHPGSFRCSLHRHPRRLSANHKN-PPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDSDHRLA

KGN45240.1 hypothetical protein Csa_016736 [Cucumis sativus]2.8e-2668.22Show/hide
Query:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNP--PPQLP-----KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFC--LFDS
        M NKTA SSRLCLCAPTTHPGSFRCSLHR  R  +++HK P  PP  P     KAAAT TD  L+KAFLMQ++KPSSHDLQRR +F+PKPSRFC  +  S
Subjt:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNP--PPQLP-----KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFC--LFDS

Query:  DHRLAVS
        D RLAVS
Subjt:  DHRLAVS

TrEMBL top hitse value%identityAlignment
A0A0A0K698 Uncharacterized protein1.4e-2668.22Show/hide
Query:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNP--PPQLP-----KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFC--LFDS
        M NKTA SSRLCLCAPTTHPGSFRCSLHR  R  +++HK P  PP  P     KAAAT TD  L+KAFLMQ++KPSSHDLQRR +F+PKPSRFC  +  S
Subjt:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNP--PPQLP-----KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFC--LFDS

Query:  DHRLAVS
        D RLAVS
Subjt:  DHRLAVS

A0A1S3CEH6 uncharacterized protein LOC1034998225.2e-2666.98Show/hide
Query:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLP------KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS--D
        M NKTA SSRLCLCAPTTHPGSFRCSLHR P   +++HK P P  P      KAA T TD   +KAFLMQ++KPSSH LQRR NFQPKPSRFC   S  D
Subjt:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLP------KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS--D

Query:  HRLAVS
         RLAVS
Subjt:  HRLAVS

A0A5A7UZ19 Uncharacterized protein1.4e-2667.92Show/hide
Query:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLP------KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS--D
        MANKTA SSRLCLCAPTTHPGSFRCSLHR P   +++HK P P  P      KAA T TD   +KAFLMQ++KPSSH LQRR NFQPKPSRFC   S  D
Subjt:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLP------KAAATATD--LVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS--D

Query:  HRLAVS
         RLAVS
Subjt:  HRLAVS

A0A6A1UNQ3 Uncharacterized protein7.2e-2053.77Show/hide
Query:  KTAPSSRLCLCAPTTHPGSFRCSLHRHPR----------RLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS---D
        K+  ++R CLCAPTTHPGSFRCS+HR+ R          RLS++      Q   AA T  + ++AFL+ +IKPSSHDLQRRRNFQPKPSRFC+ ++   D
Subjt:  KTAPSSRLCLCAPTTHPGSFRCSLHRHPR----------RLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDS---D

Query:  HRLAVS
        H +AVS
Subjt:  HRLAVS

A0A6J1DD51 uncharacterized protein LOC1110193819.7e-2570.53Show/hide
Query:  MANKTAPS----SRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLPKAAATA------TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFC
        MA KTAPS    SRLCLCAPTTHPGSFRCSLHR PR+ S   K        AAA+       TDLVKAFLMQ+IKPSSHDLQRRRNFQPKPSRFC
Subjt:  MANKTAPS----SRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLPKAAATA------TDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein2.2e-0551.61Show/hide
Query:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHP
        ++ +T+ +  +C+C+PTTHPGSF+C LHR P
Subjt:  MANKTAPSSRLCLCAPTTHPGSFRCSLHRHP

AT5G11090.1 serine-rich protein-related7.9e-1137.36Show/hide
Query:  SRLCLCAPTTHPGSFRCSLHRH-------------PRRLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCL
        SR C+C+PTTHPGSFRCSLH++                L+         L +      + V+  L  +I+PSSH L+RR  +QP+PSR  +
Subjt:  SRLCLCAPTTHPGSFRCSLHRH-------------PRRLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCL

AT5G20370.1 serine-rich protein-related5.0e-0577.27Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHR
        + R CLC+PTTHPGSFRCS HR
Subjt:  SSRLCLCAPTTHPGSFRCSLHR

AT5G25280.1 serine-rich protein-related2.0e-0935.11Show/hide
Query:  NKTAPSSRLCLCAPTTHPGSFRCSLHRH-------------PRRLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSR
        +K   S R C+C+PTTHPGSFRCSLH++                L+         L +      + V+  L  +I+PSSH L+RR  ++P+ SR
Subjt:  NKTAPSSRLCLCAPTTHPGSFRCSLHRH-------------PRRLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSR

AT5G25280.2 serine-rich protein-related2.0e-0935.11Show/hide
Query:  NKTAPSSRLCLCAPTTHPGSFRCSLHRH-------------PRRLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSR
        +K   S R C+C+PTTHPGSFRCSLH++                L+         L +      + V+  L  +I+PSSH L+RR  ++P+ SR
Subjt:  NKTAPSSRLCLCAPTTHPGSFRCSLHRH-------------PRRLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAAAACCGCTCCATCTTCCCGCCTCTGCCTCTGCGCTCCGACCACCCACCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCACCCGCGGCGGCTCTCCGCCAA
TCACAAAAATCCGCCGCCGCAGCTGCCGAAGGCCGCCGCCACCGCGACGGATCTCGTCAAGGCGTTTCTGATGCAGGTAATCAAGCCGTCGAGTCACGATCTGCAGAGAC
GGAGGAATTTCCAGCCTAAACCTTCTCGATTCTGTCTCTTCGATTCCGATCATCGCTTGGCGGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
CACAAAGCTTATTCCCAACGAAATGAGTTCAATAAATAAATAAACAAATAACCAACCTGTCATGCAGTTTAAACTTCCCGTCTTGAATGGCGAACAAAACCGCTCCATCT
TCCCGCCTCTGCCTCTGCGCTCCGACCACCCACCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCACCCGCGGCGGCTCTCCGCCAATCACAAAAATCCGCCGCCGCAGCT
GCCGAAGGCCGCCGCCACCGCGACGGATCTCGTCAAGGCGTTTCTGATGCAGGTAATCAAGCCGTCGAGTCACGATCTGCAGAGACGGAGGAATTTCCAGCCTAAACCTT
CTCGATTCTGTCTCTTCGATTCCGATCATCGCTTGGCGGTTTCTTGATCGTGAATCGCAAATCGTATGTATATATGTGTTGATTTTCTTCGTCGTATGTACGTCTCTGTT
TCCCCGAAACGATTTTTTGTGTTGTGGAAAGCCAAATTCGCAGCGATGGTTGAGCGTTTGCTTCTTCGCTTGTGGAATTTGAGAGATCTTTTTTTGTTTTGTTTTGATCG
ATGTTTGATTAGTTTTCTGAATTTGTTAGTTGATTGATGTTGTGTGTGTTAGGGTTTTTGTTGCTCTGTTTGATTGCATTGAACTGGATTTGTTTTGTATATATATAATA
TAGATGGACGGCTCTTCGAAATAGGGAAG
Protein sequenceShow/hide protein sequence
MANKTAPSSRLCLCAPTTHPGSFRCSLHRHPRRLSANHKNPPPQLPKAAATATDLVKAFLMQVIKPSSHDLQRRRNFQPKPSRFCLFDSDHRLAVS